RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 AOC3Q16853 763 aa6.76□□□□□ -1.33
SDF2-206ENST00000587788 CAVIN4Q5BKX8 364 aa6.76□□□□□ -1.33
SDF2-206ENST00000587788 C4orf48Q5BLP8 95 aa6.76□□□□□ -1.33
SDF2-206ENST00000587788 ZSCAN25Q6NSZ9 544 aa6.76□□□□□ -1.33
SDF2-206ENST00000587788 TMED8Q6PL24 325 aaPredicted RBP6.76□□□□□ -1.33
SDF2-206ENST00000587788 NOL8Q76FK4 1167 aaKnown RBP6.76□□□□□ -1.33
SDF2-206ENST00000587788 GAS2L3Q86XJ1 694 aa6.76□□□□□ -1.33
SDF2-206ENST00000587788 SP8Q8IXZ3 490 aa6.76□□□□□ -1.33
SDF2-206ENST00000587788 RTKN2Q8IZC4 609 aa6.76□□□□□ -1.33
SDF2-206ENST00000587788 PHTF2Q8N3S3 785 aa6.76□□□□□ -1.33
SDF2-206ENST00000587788 ZNF511Q8NB15 262 aa6.76□□□□□ -1.33
SDF2-206ENST00000587788 GPT2Q8TD30 523 aa6.76□□□□□ -1.33
SDF2-206ENST00000587788 XAGE2Q96GT9 111 aa6.76□□□□□ -1.33
SDF2-206ENST00000587788 GPR101Q96P66 508 aaPredicted RBP6.76□□□□□ -1.33
SDF2-206ENST00000587788 NEK1Q96PY6 1258 aa6.76□□□□□ -1.33
SDF2-206ENST00000587788 PSMD1Q99460 953 aa6.76□□□□□ -1.33
SDF2-206ENST00000587788 DBNDD2Q9BQY9 259 aa6.76□□□□□ -1.33
SDF2-206ENST00000587788 ARHGAP9Q9BRR9 750 aa6.76□□□□□ -1.33
SDF2-206ENST00000587788 LLPHQ9BRT6 129 aaKnown RBP6.76□□□□□ -1.33
SDF2-206ENST00000587788 C1QTNF2Q9BXJ5 285 aa6.76□□□□□ -1.33
SDF2-206ENST00000587788 GNL3LQ9NVN8 582 aaKnown RBP6.76□□□□□ -1.33
SDF2-206ENST00000587788 PAG1Q9NWQ8 432 aa6.76□□□□□ -1.33
SDF2-206ENST00000587788 LEMD3Q9Y2U8 911 aa6.76□□□□□ -1.33
SDF2-206ENST00000587788 GLTPD2A6NH11 291 aa6.75□□□□□ -1.33
SDF2-206ENST00000587788 POTECB2RU33 542 aa6.75□□□□□ -1.33
SDF2-206ENST00000587788 DDNO94850 711 aaPredicted RBP6.75□□□□□ -1.33
SDF2-206ENST00000587788 FGFR2P21802 821 aa6.75□□□□□ -1.33
SDF2-206ENST00000587788 GJB2P29033 226 aa6.75□□□□□ -1.33
SDF2-206ENST00000587788 ATP2B3Q16720 1220 aa6.75□□□□□ -1.33
SDF2-206ENST00000587788 UVSSAQ2YD98 709 aa6.75□□□□□ -1.33
SDF2-206ENST00000587788 ADCK5Q3MIX3 580 aa6.75□□□□□ -1.33
SDF2-206ENST00000587788 TTC39AQ5SRH9 613 aa6.75□□□□□ -1.33
SDF2-206ENST00000587788 ZMYM1Q5SVZ6 1142 aa6.75□□□□□ -1.33
SDF2-206ENST00000587788 CCDC183Q5T5S1 534 aa6.75□□□□□ -1.33
SDF2-206ENST00000587788 CC2D2BQ6DHV5 1058 aa6.75□□□□□ -1.33
SDF2-206ENST00000587788 USP48Q86UV5 1035 aa6.75□□□□□ -1.33
SDF2-206ENST00000587788 CCDC83Q8IWF9 413 aa6.75□□□□□ -1.33
SDF2-206ENST00000587788 FAM174AQ8TBP5 190 aa6.75□□□□□ -1.33
SDF2-206ENST00000587788 DNAJC2Q99543 621 aaKnown RBP6.75□□□□□ -1.33
SDF2-206ENST00000587788 RTFDC1Q9BY42 306 aaPredicted RBP6.75□□□□□ -1.33
SDF2-206ENST00000587788 RRAGCQ9HB90 399 aa6.75□□□□□ -1.33
SDF2-206ENST00000587788 MINPP1Q9UNW1 487 aa6.75□□□□□ -1.33
SDF2-206ENST00000587788 ECM29Q5VYK3 1845 aa6.75□□□□□ -1.33
SDF2-206ENST00000587788 TRPM7Q96QT4 1865 aa6.75□□□□□ -1.33
SDF2-206ENST00000587788 RNF223E7ERA6 249 aa6.74□□□□□ -1.33
SDF2-206ENST00000587788 GOLIM4O00461 696 aa6.74□□□□□ -1.33
SDF2-206ENST00000587788 PPIP5K2O43314 1243 aa6.74□□□□□ -1.33
SDF2-206ENST00000587788 LMOD1P29536 600 aaPredicted RBP6.74□□□□□ -1.33
SDF2-206ENST00000587788 CHRNDQ07001 517 aa6.74□□□□□ -1.33
SDF2-206ENST00000587788 ME3Q16798 604 aa6.74□□□□□ -1.33
SDF2-206ENST00000587788 LARP1BQ659C4 914 aaKnown RBP6.74□□□□□ -1.33
SDF2-206ENST00000587788 ATL3Q6DD88 541 aa6.74□□□□□ -1.33
SDF2-206ENST00000587788 DPP8Q6V1X1 898 aaPredicted RBP6.74□□□□□ -1.33
SDF2-206ENST00000587788 DHX32Q7L7V1 743 aaKnown RBP6.74□□□□□ -1.33
SDF2-206ENST00000587788 BPHLQ86WA6 291 aaPredicted RBP6.74□□□□□ -1.33
SDF2-206ENST00000587788 FBXL16Q8N461 479 aa6.74□□□□□ -1.33
SDF2-206ENST00000587788 MPNDQ8N594 471 aa6.74□□□□□ -1.33
SDF2-206ENST00000587788 VGLL2Q8N8G2 317 aa6.74□□□□□ -1.33
SDF2-206ENST00000587788 ANKLE1Q8NAG6 615 aa6.74□□□□□ -1.33
SDF2-206ENST00000587788 RGS22Q8NE09 1264 aa6.74□□□□□ -1.33
SDF2-206ENST00000587788 BAP1Q92560 729 aa6.74□□□□□ -1.33
SDF2-206ENST00000587788 PANK2Q9BZ23 570 aa6.74□□□□□ -1.33
SDF2-206ENST00000587788 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.74□□□□□ -1.33
SDF2-206ENST00000587788 SCAND2PQ9GZW5 306 aaPredicted RBP6.74□□□□□ -1.33
SDF2-206ENST00000587788 TSPY26PQ9H489 355 aa6.74□□□□□ -1.33
SDF2-206ENST00000587788 ZSCAN16Q9H4T2 348 aaPredicted RBP6.74□□□□□ -1.33
SDF2-206ENST00000587788 POLLQ9UGP5 575 aa6.74□□□□□ -1.33
SDF2-206ENST00000587788 TPCN1Q9ULQ1 816 aa6.74□□□□□ -1.33
SDF2-206ENST00000587788 NSFL1CQ9UNZ2 370 aaKnown RBP6.74□□□□□ -1.33
SDF2-206ENST00000587788 MTMR6Q9Y217 621 aa6.74□□□□□ -1.33
SDF2-206ENST00000587788 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.74□□□□□ -1.33
SDF2-206ENST00000587788 ZNF609O15014 1411 aa6.74□□□□□ -1.33
SDF2-206ENST00000587788 ELP1O95163 1332 aa6.74□□□□□ -1.33
SDF2-206ENST00000587788 YDJCA8MPS7 323 aa6.73□□□□□ -1.33
SDF2-206ENST00000587788 USP17L5A8MUK1 530 aa6.73□□□□□ -1.33
SDF2-206ENST00000587788 ESPNB1AK53 854 aa6.73□□□□□ -1.33
SDF2-206ENST00000587788 FZD9O00144 591 aa6.73□□□□□ -1.33
SDF2-206ENST00000587788 ATG7O95352 703 aa6.73□□□□□ -1.33
SDF2-206ENST00000587788 RFX1P22670 979 aa6.73□□□□□ -1.33
SDF2-206ENST00000587788 ATP2B4P23634 1241 aa6.73□□□□□ -1.33
SDF2-206ENST00000587788 MCM5P33992 734 aa6.73□□□□□ -1.33
SDF2-206ENST00000587788 SH3BP2P78314 561 aa6.73□□□□□ -1.33
SDF2-206ENST00000587788 KRT85P78386 507 aa6.73□□□□□ -1.33
SDF2-206ENST00000587788 HMGN5P82970 282 aaKnown RBP6.73□□□□□ -1.33
SDF2-206ENST00000587788 KIAA2012Q0VF49 1180 aa6.73□□□□□ -1.33
SDF2-206ENST00000587788 PLA2G2CQ5R387 149 aa6.73□□□□□ -1.33
SDF2-206ENST00000587788 FOXD4L5Q5VV16 416 aaPredicted RBP6.73□□□□□ -1.33
SDF2-206ENST00000587788 CCDC102BQ68D86 513 aa6.73□□□□□ -1.33
SDF2-206ENST00000587788 C15orf52Q6ZUT6 534 aaKnown RBP6.73□□□□□ -1.33
SDF2-206ENST00000587788 ZNF589Q86UQ0 364 aaPredicted RBP6.73□□□□□ -1.33
SDF2-206ENST00000587788 TRMT44Q8IYL2 757 aaKnown RBP6.73□□□□□ -1.33
SDF2-206ENST00000587788 LARGE2Q8N3Y3 721 aa6.73□□□□□ -1.33
SDF2-206ENST00000587788 TBC1D16Q8TBP0 767 aa6.73□□□□□ -1.33
SDF2-206ENST00000587788 FOXD4L4Q8WXT5 416 aaPredicted RBP6.73□□□□□ -1.33
SDF2-206ENST00000587788 FOXJ1Q92949 421 aa6.73□□□□□ -1.33
SDF2-206ENST00000587788 PDLIM2Q96JY6 352 aa6.73□□□□□ -1.33
SDF2-206ENST00000587788 PODXL2Q9NZ53 605 aa6.73□□□□□ -1.33
SDF2-206ENST00000587788 TMEM63CQ9P1W3 806 aa6.73□□□□□ -1.33
SDF2-206ENST00000587788 PCDHB9Q9Y5E1 797 aa6.73□□□□□ -1.33
SDF2-206ENST00000587788 WDR19Q8NEZ3 1342 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms