RNA–Protein interactions for RNA: ENST00000587776.1

HDAC5-206, Transcript of histone deacetylase 5, humanhuman

TSL 3

Gene HDAC5, Length 917 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-206ENST00000587776 USP17L20D6RJB6 530 aa18.44■□□□□ 0.54
HDAC5-206ENST00000587776 GLRX3O76003 335 aaKnown RBP18.44■□□□□ 0.54
HDAC5-206ENST00000587776 USP14P54578 494 aa18.44■□□□□ 0.54
HDAC5-206ENST00000587776 USP17L24Q0WX57 530 aa18.44■□□□□ 0.54
HDAC5-206ENST00000587776 CCL14Q16627 93 aa18.44■□□□□ 0.54
HDAC5-206ENST00000587776 CERKLQ49MI3 558 aaPredicted RBP18.44■□□□□ 0.54
HDAC5-206ENST00000587776 TTC6Q86TZ1 520 aa18.44■□□□□ 0.54
HDAC5-206ENST00000587776 GDF15Q99988 308 aa18.44■□□□□ 0.54
HDAC5-206ENST00000587776 CABP5Q9NP86 173 aa18.44■□□□□ 0.54
HDAC5-206ENST00000587776 CCND3P30281 292 aaPredicted RBP18.43■□□□□ 0.54
HDAC5-206ENST00000587776 BMP8BP34820 402 aa18.43■□□□□ 0.54
HDAC5-206ENST00000587776 MNX1P50219 401 aaPredicted RBP18.43■□□□□ 0.54
HDAC5-206ENST00000587776 ABCB5Q2M3G0 1257 aa18.43■□□□□ 0.54
HDAC5-206ENST00000587776 MORN1Q5T089 497 aa18.43■□□□□ 0.54
HDAC5-206ENST00000587776 TATDN1Q6P1N9 297 aa18.43■□□□□ 0.54
HDAC5-206ENST00000587776 AACSQ86V21 672 aa18.43■□□□□ 0.54
HDAC5-206ENST00000587776 ERC1Q8IUD2 1116 aa18.43■□□□□ 0.54
HDAC5-206ENST00000587776 C12orf42Q96LP6 360 aa18.43■□□□□ 0.54
HDAC5-206ENST00000587776 EHD4Q9H223 541 aa18.43■□□□□ 0.54
HDAC5-206ENST00000587776 RABGAP1Q9Y3P9 1069 aa18.43■□□□□ 0.54
HDAC5-206ENST00000587776 PFASO15067 1338 aa18.43■□□□□ 0.54
HDAC5-206ENST00000587776 RLBP1P12271 317 aa18.42■□□□□ 0.54
HDAC5-206ENST00000587776 MAGEA10P43363 369 aaPredicted RBP18.42■□□□□ 0.54
HDAC5-206ENST00000587776 HNRNPUQ00839 825 aaKnown RBP eCLIP18.42■□□□□ 0.54
HDAC5-206ENST00000587776 MAP2K5Q13163 448 aa18.42■□□□□ 0.54
HDAC5-206ENST00000587776 SLC17A8Q8NDX2 589 aa18.42■□□□□ 0.54
HDAC5-206ENST00000587776 USP6NLQ92738 828 aa18.42■□□□□ 0.54
HDAC5-206ENST00000587776 ANTXR1Q9H6X2 564 aa18.42■□□□□ 0.54
HDAC5-206ENST00000587776 EXOC6BQ9Y2D4 811 aa18.42■□□□□ 0.54
HDAC5-206ENST00000587776 IVNS1ABPQ9Y6Y0 642 aa18.42■□□□□ 0.54
HDAC5-206ENST00000587776 POLR3DP05423 398 aaPredicted RBP18.41■□□□□ 0.54
HDAC5-206ENST00000587776 VCAM1P19320 739 aa18.41■□□□□ 0.54
HDAC5-206ENST00000587776 MFSD14CQ5VZR4 134 aa18.41■□□□□ 0.54
HDAC5-206ENST00000587776 EDC3Q96F86 508 aaKnown RBP18.41■□□□□ 0.54
HDAC5-206ENST00000587776 UBE2OQ9C0C9 1292 aaKnown RBP18.41■□□□□ 0.54
HDAC5-206ENST00000587776 MAGEB6P1A0A0J9YX57 407 aa18.4■□□□□ 0.54
HDAC5-206ENST00000587776 CEP85Q6P2H3 762 aa18.4■□□□□ 0.54
HDAC5-206ENST00000587776 TMED8Q6PL24 325 aaPredicted RBP18.4■□□□□ 0.54
HDAC5-206ENST00000587776 CATSPERGQ6ZRH7 1159 aa18.4■□□□□ 0.54
HDAC5-206ENST00000587776 KIAA1683Q9H0B3 1180 aa18.4■□□□□ 0.54
HDAC5-206ENST00000587776 MYH7P12883 1935 aa18.39■□□□□ 0.53
HDAC5-206ENST00000587776 BAZ2AQ9UIF9 1905 aaKnown RBP18.39■□□□□ 0.53
HDAC5-206ENST00000587776 SLC15A5A6NIM6 579 aa18.39■□□□□ 0.53
HDAC5-206ENST00000587776 MPHOSPH10O00566 681 aaKnown RBP18.39■□□□□ 0.53
HDAC5-206ENST00000587776 CNMDO75829 334 aa18.39■□□□□ 0.53
HDAC5-206ENST00000587776 CNGA1P29973 690 aa18.39■□□□□ 0.53
HDAC5-206ENST00000587776 TTF1Q15361 905 aaPredicted RBP18.39■□□□□ 0.53
HDAC5-206ENST00000587776 POTEEQ6S8J3 1075 aa18.39■□□□□ 0.53
HDAC5-206ENST00000587776 TDHQ8IZJ6 230 aa18.39■□□□□ 0.53
HDAC5-206ENST00000587776 ACER1Q8TDN7 264 aa18.39■□□□□ 0.53
HDAC5-206ENST00000587776 CRNKL1Q9BZJ0 848 aaKnown RBP18.39■□□□□ 0.53
HDAC5-206ENST00000587776 BCL11AQ9H165 835 aa18.39■□□□□ 0.53
HDAC5-206ENST00000587776 RPAP3Q9H6T3 665 aaPredicted RBP18.39■□□□□ 0.53
HDAC5-206ENST00000587776 SHMT1P34896 483 aa18.38■□□□□ 0.53
HDAC5-206ENST00000587776 PLCD1P51178 756 aa18.38■□□□□ 0.53
HDAC5-206ENST00000587776 ATP2B2Q01814 1243 aa18.38■□□□□ 0.53
HDAC5-206ENST00000587776 HSP90AB4PQ58FF6 505 aa18.38■□□□□ 0.53
HDAC5-206ENST00000587776 LHX8Q68G74 356 aa18.38■□□□□ 0.53
HDAC5-206ENST00000587776 IL1RAPL2Q9NP60 686 aa18.38■□□□□ 0.53
HDAC5-206ENST00000587776 ZNF236Q9UL36 1845 aa18.37■□□□□ 0.53
HDAC5-206ENST00000587776 APBB1O00213 710 aa18.37■□□□□ 0.53
HDAC5-206ENST00000587776 COL6A1P12109 1028 aa18.37■□□□□ 0.53
HDAC5-206ENST00000587776 PTPREP23469 700 aa18.37■□□□□ 0.53
HDAC5-206ENST00000587776 SEPT2Q15019 361 aa18.37■□□□□ 0.53
HDAC5-206ENST00000587776 LRRC26Q2I0M4 334 aa18.37■□□□□ 0.53
HDAC5-206ENST00000587776 SLC9C2Q5TAH2 1124 aa18.37■□□□□ 0.53
HDAC5-206ENST00000587776 DEFB123Q8N688 67 aa18.37■□□□□ 0.53
HDAC5-206ENST00000587776 RIOK1Q9BRS2 568 aaKnown RBP18.37■□□□□ 0.53
HDAC5-206ENST00000587776 TANGO6Q9C0B7 1094 aa18.37■□□□□ 0.53
HDAC5-206ENST00000587776 MCM9Q9NXL9 1143 aa18.37■□□□□ 0.53
HDAC5-206ENST00000587776 BTBD7Q9P203 1132 aa18.37■□□□□ 0.53
HDAC5-206ENST00000587776 A0A0G2JMZ2 1700 aa18.37■□□□□ 0.53
HDAC5-206ENST00000587776 SPDYE16A6NNV3 312 aaPredicted RBP18.36■□□□□ 0.53
HDAC5-206ENST00000587776 GPR153Q6NV75 609 aa18.36■□□□□ 0.53
HDAC5-206ENST00000587776 LBX2Q6XYB7 198 aa18.36■□□□□ 0.53
HDAC5-206ENST00000587776 DNAJC2Q99543 621 aaKnown RBP18.36■□□□□ 0.53
HDAC5-206ENST00000587776 SENP6Q9GZR1 1112 aaPredicted RBP18.36■□□□□ 0.53
HDAC5-206ENST00000587776 FLRT1Q9NZU1 646 aa18.36■□□□□ 0.53
HDAC5-206ENST00000587776 ZNFX1Q9P2E3 1918 aaKnown RBP18.36■□□□□ 0.53
HDAC5-206ENST00000587776 COL11A1P12107 1806 aaPredicted RBP18.35■□□□□ 0.53
HDAC5-206ENST00000587776 PARP14Q460N5 1801 aa18.35■□□□□ 0.53
HDAC5-206ENST00000587776 MSCO60682 206 aa18.35■□□□□ 0.53
HDAC5-206ENST00000587776 PDE6AP16499 860 aa18.35■□□□□ 0.53
HDAC5-206ENST00000587776 MDM2Q00987 491 aaPredicted RBP18.35■□□□□ 0.53
HDAC5-206ENST00000587776 GRB14Q14449 540 aa18.35■□□□□ 0.53
HDAC5-206ENST00000587776 LRIT3Q3SXY7 679 aa18.35■□□□□ 0.53
HDAC5-206ENST00000587776 CLASRPQ8N2M8 674 aaKnown RBP18.35■□□□□ 0.53
HDAC5-206ENST00000587776 RHPN1Q8TCX5 695 aa18.35■□□□□ 0.53
HDAC5-206ENST00000587776 DDX20Q9UHI6 824 aaKnown RBP18.35■□□□□ 0.53
HDAC5-206ENST00000587776 RLFQ13129 1914 aa18.35■□□□□ 0.53
HDAC5-206ENST00000587776 ZNF532Q9HCE3 1301 aa18.34■□□□□ 0.53
HDAC5-206ENST00000587776 GOLIM4O00461 696 aa18.34■□□□□ 0.53
HDAC5-206ENST00000587776 DLL1O00548 723 aa18.34■□□□□ 0.53
HDAC5-206ENST00000587776 IFIT2P09913 472 aaKnown RBP18.34■□□□□ 0.53
HDAC5-206ENST00000587776 GUCY1A2P33402 732 aa18.34■□□□□ 0.53
HDAC5-206ENST00000587776 Q7L0L9 218 aa18.34■□□□□ 0.53
HDAC5-206ENST00000587776 DPP9Q86TI2 863 aa18.34■□□□□ 0.53
HDAC5-206ENST00000587776 NPLOC4Q8TAT6 608 aa18.34■□□□□ 0.53
HDAC5-206ENST00000587776 PANK1Q8TE04 598 aa18.34■□□□□ 0.53
HDAC5-206ENST00000587776 SDR42E1Q8WUS8 393 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms