RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 CCDC69A6NI79 296 aa11.91□□□□□ -0.5
APOC1-201ENST00000586638 FGRP09769 529 aa11.91□□□□□ -0.5
APOC1-201ENST00000586638 PCP11498 1178 aaKnown RBP11.91□□□□□ -0.5
APOC1-201ENST00000586638 METAP2P50579 478 aaKnown RBP eCLIP11.91□□□□□ -0.5
APOC1-201ENST00000586638 PDE4BQ07343 736 aa11.91□□□□□ -0.5
APOC1-201ENST00000586638 SART3Q15020 963 aaKnown RBP11.91□□□□□ -0.5
APOC1-201ENST00000586638 CDC42EP5Q6NZY7 148 aa11.91□□□□□ -0.5
APOC1-201ENST00000586638 HHIPL2Q6UWX4 724 aa11.91□□□□□ -0.5
APOC1-201ENST00000586638 SGMS1Q86VZ5 419 aa11.91□□□□□ -0.5
APOC1-201ENST00000586638 CCDC144CPQ8IYA2 1237 aa11.91□□□□□ -0.5
APOC1-201ENST00000586638 LLPHQ9BRT6 129 aaKnown RBP11.91□□□□□ -0.5
APOC1-201ENST00000586638 USP40Q9NVE5 1235 aa11.91□□□□□ -0.5
APOC1-201ENST00000586638 GGA3Q9NZ52 723 aa11.91□□□□□ -0.5
APOC1-201ENST00000586638 MTMR6Q9Y217 621 aa11.91□□□□□ -0.5
APOC1-201ENST00000586638 NID2Q14112 1375 aa11.91□□□□□ -0.5
APOC1-201ENST00000586638 CASP8AP2Q9UKL3 1982 aa11.9□□□□□ -0.5
APOC1-201ENST00000586638 ASTN2O75129 1339 aaPredicted RBP11.9□□□□□ -0.5
APOC1-201ENST00000586638 ZBTB43O43298 467 aa11.9□□□□□ -0.5
APOC1-201ENST00000586638 WDHD1O75717 1129 aaPredicted RBP11.9□□□□□ -0.5
APOC1-201ENST00000586638 F13A1P00488 732 aa11.9□□□□□ -0.5
APOC1-201ENST00000586638 ZSCAN22P10073 491 aaPredicted RBP11.9□□□□□ -0.5
APOC1-201ENST00000586638 LIFRP42702 1097 aa11.9□□□□□ -0.5
APOC1-201ENST00000586638 PLCD1P51178 756 aa11.9□□□□□ -0.5
APOC1-201ENST00000586638 RBM5P52756 815 aaKnown RBP eCLIP11.9□□□□□ -0.5
APOC1-201ENST00000586638 SOX10P56693 466 aa11.9□□□□□ -0.5
APOC1-201ENST00000586638 ZNF280AP59817 542 aaPredicted RBP11.9□□□□□ -0.5
APOC1-201ENST00000586638 SEC23AQ15436 765 aa11.9□□□□□ -0.5
APOC1-201ENST00000586638 FOXD4L6Q3SYB3 417 aaPredicted RBP11.9□□□□□ -0.5
APOC1-201ENST00000586638 FAM47AQ5JRC9 791 aa11.9□□□□□ -0.5
APOC1-201ENST00000586638 ANGEL2Q5VTE6 544 aaKnown RBP11.9□□□□□ -0.5
APOC1-201ENST00000586638 APOBEC3HQ6NTF7 200 aaKnown RBP11.9□□□□□ -0.5
APOC1-201ENST00000586638 RSBN1LQ6PCB5 846 aaPredicted RBP11.9□□□□□ -0.5
APOC1-201ENST00000586638 FOXD4L3Q6VB84 417 aaPredicted RBP11.9□□□□□ -0.5
APOC1-201ENST00000586638 CLEC17AQ6ZS10 378 aa11.9□□□□□ -0.5
APOC1-201ENST00000586638 AGBL3Q8NEM8 1001 aa11.9□□□□□ -0.5
APOC1-201ENST00000586638 GREB1LQ9C091 1923 aaPredicted RBP11.9□□□□□ -0.51
APOC1-201ENST00000586638 TSPY2A6NKD2 308 aa11.89□□□□□ -0.51
APOC1-201ENST00000586638 DDX11L8A8MPP1 907 aa11.89□□□□□ -0.51
APOC1-201ENST00000586638 NMT2O60551 498 aa11.89□□□□□ -0.51
APOC1-201ENST00000586638 CDC27P30260 824 aa11.89□□□□□ -0.51
APOC1-201ENST00000586638 CACNB3P54284 484 aa11.89□□□□□ -0.51
APOC1-201ENST00000586638 FKBP1BP68106 108 aa11.89□□□□□ -0.51
APOC1-201ENST00000586638 HMGN5P82970 282 aaKnown RBP11.89□□□□□ -0.51
APOC1-201ENST00000586638 CFAP100Q494V2 611 aa11.89□□□□□ -0.51
APOC1-201ENST00000586638 LARP1BQ659C4 914 aaKnown RBP11.89□□□□□ -0.51
APOC1-201ENST00000586638 MCTP1Q6DN14 999 aa11.89□□□□□ -0.51
APOC1-201ENST00000586638 C16orf86Q6ZW13 317 aa11.89□□□□□ -0.51
APOC1-201ENST00000586638 CTU1Q7Z7A3 348 aaKnown RBP11.89□□□□□ -0.51
APOC1-201ENST00000586638 ZNF654Q8IZM8 581 aa11.89□□□□□ -0.51
APOC1-201ENST00000586638 ENAHQ8N8S7 591 aaPredicted RBP11.89□□□□□ -0.51
APOC1-201ENST00000586638 FAM184AQ8NB25 1140 aa11.89□□□□□ -0.51
APOC1-201ENST00000586638 ZDHHC15Q96MV8 337 aa11.89□□□□□ -0.51
APOC1-201ENST00000586638 ZSCAN10Q96SZ4 725 aaPredicted RBP11.89□□□□□ -0.51
APOC1-201ENST00000586638 OSBPL5Q9H0X9 879 aaPredicted RBP11.89□□□□□ -0.51
APOC1-201ENST00000586638 SLC12A7Q9Y666 1083 aa11.89□□□□□ -0.51
APOC1-201ENST00000586638 MYO3BQ8WXR4 1341 aa11.88□□□□□ -0.51
APOC1-201ENST00000586638 CPLX1O14810 134 aa11.88□□□□□ -0.51
APOC1-201ENST00000586638 RASA1P20936 1047 aa11.88□□□□□ -0.51
APOC1-201ENST00000586638 HDLBPQ00341 1268 aaKnown RBP11.88□□□□□ -0.51
APOC1-201ENST00000586638 NFIAQ12857 509 aa11.88□□□□□ -0.51
APOC1-201ENST00000586638 RASAL3Q86YV0 1011 aa11.88□□□□□ -0.51
APOC1-201ENST00000586638 MTA3Q9BTC8 594 aa11.88□□□□□ -0.51
APOC1-201ENST00000586638 MYOZ2Q9NPC6 264 aa11.88□□□□□ -0.51
APOC1-201ENST00000586638 UBE2Q2LH0YL09 131 aa11.87□□□□□ -0.51
APOC1-201ENST00000586638 FDPSP14324 419 aaKnown RBP11.87□□□□□ -0.51
APOC1-201ENST00000586638 PDCP20941 246 aa11.87□□□□□ -0.51
APOC1-201ENST00000586638 CDK8P49336 464 aa11.87□□□□□ -0.51
APOC1-201ENST00000586638 RTN1Q16799 776 aa11.87□□□□□ -0.51
APOC1-201ENST00000586638 IFIT1BQ5T764 474 aaKnown RBP11.87□□□□□ -0.51
APOC1-201ENST00000586638 SYNE3Q6ZMZ3 975 aa11.87□□□□□ -0.51
APOC1-201ENST00000586638 FERMT3Q86UX7 667 aa11.87□□□□□ -0.51
APOC1-201ENST00000586638 IQCA1Q86XH1 822 aa11.87□□□□□ -0.51
APOC1-201ENST00000586638 NUP133Q8WUM0 1156 aa11.87□□□□□ -0.51
APOC1-201ENST00000586638 GMLQ99445 158 aa11.87□□□□□ -0.51
APOC1-201ENST00000586638 MKNK2Q9HBH9 465 aa11.87□□□□□ -0.51
APOC1-201ENST00000586638 FAM217BQ9NTX9 383 aaPredicted RBP11.87□□□□□ -0.51
APOC1-201ENST00000586638 SERPINA10Q9UK55 444 aa11.87□□□□□ -0.51
APOC1-201ENST00000586638 HDAC9Q9UKV0 1011 aa11.87□□□□□ -0.51
APOC1-201ENST00000586638 MYH4Q9Y623 1939 aa11.87□□□□□ -0.51
APOC1-201ENST00000586638 GOLGA6L22H0YM25 854 aa11.86□□□□□ -0.51
APOC1-201ENST00000586638 TBC1D8O95759 1140 aa11.86□□□□□ -0.51
APOC1-201ENST00000586638 ADD1P35611 737 aaKnown RBP11.86□□□□□ -0.51
APOC1-201ENST00000586638 TFAP4Q01664 338 aa11.86□□□□□ -0.51
APOC1-201ENST00000586638 GUCY1B3Q02153 619 aa11.86□□□□□ -0.51
APOC1-201ENST00000586638 PKN2Q16513 984 aaKnown RBP11.86□□□□□ -0.51
APOC1-201ENST00000586638 PHKBQ93100 1093 aa11.86□□□□□ -0.51
APOC1-201ENST00000586638 CHMP4CQ96CF2 233 aa11.86□□□□□ -0.51
APOC1-201ENST00000586638 TDRD3Q9H7E2 651 aaKnown RBP11.86□□□□□ -0.51
APOC1-201ENST00000586638 ORC3Q9UBD5 711 aaPredicted RBP11.86□□□□□ -0.51
APOC1-201ENST00000586638 KIF3AQ9Y496 699 aa11.86□□□□□ -0.51
APOC1-201ENST00000586638 PITPNM2Q9BZ72 1349 aa11.86□□□□□ -0.51
APOC1-201ENST00000586638 PLIN4Q96Q06 1357 aa11.85□□□□□ -0.51
APOC1-201ENST00000586638 H3BQV1 296 aa11.85□□□□□ -0.51
APOC1-201ENST00000586638 DHX16O60231 1041 aaKnown RBP11.85□□□□□ -0.51
APOC1-201ENST00000586638 DDAH1O94760 285 aa11.85□□□□□ -0.51
APOC1-201ENST00000586638 HLA-DOAP06340 250 aa11.85□□□□□ -0.51
APOC1-201ENST00000586638 TSPY3P0CV98 308 aa11.85□□□□□ -0.51
APOC1-201ENST00000586638 TSPY8P0CW00 308 aa11.85□□□□□ -0.51
APOC1-201ENST00000586638 TCP10Q12799 353 aa11.85□□□□□ -0.51
APOC1-201ENST00000586638 RESTQ13127 1097 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms