RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 SNW1Q13573 536 aaKnown RBP12.99□□□□□ -0.33
LIG3-204ENST00000585740 DIXDC1Q155Q3 683 aa12.99□□□□□ -0.33
LIG3-204ENST00000585740 DPP8Q6V1X1 898 aaPredicted RBP12.99□□□□□ -0.33
LIG3-204ENST00000585740 DIS3L2Q8IYB7 885 aaKnown RBP12.99□□□□□ -0.33
LIG3-204ENST00000585740 FMR1NBQ8N0W7 255 aaPredicted RBP12.99□□□□□ -0.33
LIG3-204ENST00000585740 DNAJC5GQ8N7S2 189 aa12.99□□□□□ -0.33
LIG3-204ENST00000585740 TGFBRAP1Q8WUH2 860 aa12.99□□□□□ -0.33
LIG3-204ENST00000585740 KAT14Q9H8E8 782 aa12.99□□□□□ -0.33
LIG3-204ENST00000585740 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.99□□□□□ -0.33
LIG3-204ENST00000585740 GJB4Q9NTQ9 266 aa12.99□□□□□ -0.33
LIG3-204ENST00000585740 MRVI1Q9Y6F6 885 aa12.99□□□□□ -0.33
LIG3-204ENST00000585740 MYH8P13535 1937 aa12.98□□□□□ -0.33
LIG3-204ENST00000585740 TFAP4Q01664 338 aa12.98□□□□□ -0.33
LIG3-204ENST00000585740 FUT2Q10981 343 aa12.98□□□□□ -0.33
LIG3-204ENST00000585740 GRIK5Q16478 980 aa12.98□□□□□ -0.33
LIG3-204ENST00000585740 STX1AQ16623 288 aa12.98□□□□□ -0.33
LIG3-204ENST00000585740 ZSCAN30Q86W11 494 aa12.98□□□□□ -0.33
LIG3-204ENST00000585740 CKAP2LQ8IYA6 745 aa12.98□□□□□ -0.33
LIG3-204ENST00000585740 FAM177A1Q8N128 213 aaPredicted RBP12.98□□□□□ -0.33
LIG3-204ENST00000585740 TIGD1Q96MW7 591 aa12.98□□□□□ -0.33
LIG3-204ENST00000585740 GOLPH3LQ9H4A5 285 aa12.98□□□□□ -0.33
LIG3-204ENST00000585740 CNTNAP5Q8WYK1 1306 aa12.97□□□□□ -0.33
LIG3-204ENST00000585740 FAM237AA0A1B0GTK4 181 aa12.97□□□□□ -0.33
LIG3-204ENST00000585740 G3V3G9 751 aa12.97□□□□□ -0.33
LIG3-204ENST00000585740 SMIM22K7EJ46 135 aa12.97□□□□□ -0.33
LIG3-204ENST00000585740 CAPN15O75808 1086 aa12.97□□□□□ -0.33
LIG3-204ENST00000585740 BMP15O95972 392 aa12.97□□□□□ -0.33
LIG3-204ENST00000585740 TSPY3P0CV98 308 aa12.97□□□□□ -0.33
LIG3-204ENST00000585740 TSPY8P0CW00 308 aa12.97□□□□□ -0.33
LIG3-204ENST00000585740 GUCY1A2P33402 732 aa12.97□□□□□ -0.33
LIG3-204ENST00000585740 KRT2P35908 639 aa12.97□□□□□ -0.33
LIG3-204ENST00000585740 FKBP1AP62942 108 aaKnown RBP12.97□□□□□ -0.33
LIG3-204ENST00000585740 GTF2IP78347 998 aa12.97□□□□□ -0.33
LIG3-204ENST00000585740 PTPAQ15257 358 aa12.97□□□□□ -0.33
LIG3-204ENST00000585740 FAM47AQ5JRC9 791 aa12.97□□□□□ -0.33
LIG3-204ENST00000585740 AXDND1Q5T1B0 1012 aaPredicted RBP12.97□□□□□ -0.33
LIG3-204ENST00000585740 DCAF8Q5TAQ9 597 aa12.97□□□□□ -0.33
LIG3-204ENST00000585740 C16orf86Q6ZW13 317 aa12.97□□□□□ -0.33
LIG3-204ENST00000585740 C2CD5Q86YS7 1000 aa12.97□□□□□ -0.33
LIG3-204ENST00000585740 MAPKAPK5Q8IW41 473 aa12.97□□□□□ -0.33
LIG3-204ENST00000585740 LZTS2Q9BRK4 669 aa12.97□□□□□ -0.33
LIG3-204ENST00000585740 ANO10Q9NW15 660 aa12.97□□□□□ -0.33
LIG3-204ENST00000585740 NOL7Q9UMY1 257 aaKnown RBP12.97□□□□□ -0.33
LIG3-204ENST00000585740 FLT1P17948 1338 aa12.96□□□□□ -0.33
LIG3-204ENST00000585740 BTBD18B2RXH4 712 aa12.96□□□□□ -0.33
LIG3-204ENST00000585740 H0YIN7 160 aa12.96□□□□□ -0.33
LIG3-204ENST00000585740 PTMAP06454 111 aaKnown RBP12.96□□□□□ -0.33
LIG3-204ENST00000585740 MSNP26038 577 aaKnown RBP12.96□□□□□ -0.33
LIG3-204ENST00000585740 RHBDL3P58872 404 aa12.96□□□□□ -0.33
LIG3-204ENST00000585740 GRM4Q14833 912 aa12.96□□□□□ -0.33
LIG3-204ENST00000585740 PKN1Q16512 942 aa12.96□□□□□ -0.33
LIG3-204ENST00000585740 ANO6Q4KMQ2 910 aa12.96□□□□□ -0.33
LIG3-204ENST00000585740 COL13A1Q5TAT6 717 aaPredicted RBP12.96□□□□□ -0.33
LIG3-204ENST00000585740 CC2D2BQ6DHV5 1058 aa12.96□□□□□ -0.33
LIG3-204ENST00000585740 PODNQ7Z5L7 613 aa12.96□□□□□ -0.33
LIG3-204ENST00000585740 SLC51AQ86UW1 340 aa12.96□□□□□ -0.33
LIG3-204ENST00000585740 CNKSR1Q969H4 720 aa12.96□□□□□ -0.33
LIG3-204ENST00000585740 SDF4Q9BRK5 362 aa12.96□□□□□ -0.33
LIG3-204ENST00000585740 PHF20Q9BVI0 1012 aa12.96□□□□□ -0.33
LIG3-204ENST00000585740 KCNJ14Q9UNX9 436 aa12.96□□□□□ -0.33
LIG3-204ENST00000585740 A0A1B0GVL5 298 aa12.95□□□□□ -0.34
LIG3-204ENST00000585740 RIMBP2O15034 1052 aa12.95□□□□□ -0.34
LIG3-204ENST00000585740 PLEKHA8P1O95397 391 aa12.95□□□□□ -0.34
LIG3-204ENST00000585740 TPM3P06753 285 aa12.95□□□□□ -0.34
LIG3-204ENST00000585740 CALML3P27482 149 aa12.95□□□□□ -0.34
LIG3-204ENST00000585740 CLCN1P35523 988 aa12.95□□□□□ -0.34
LIG3-204ENST00000585740 NDUFA8P51970 172 aa12.95□□□□□ -0.34
LIG3-204ENST00000585740 ZRSR1Q15695 479 aaKnown RBP12.95□□□□□ -0.34
LIG3-204ENST00000585740 RCSD1Q6JBY9 416 aa12.95□□□□□ -0.34
LIG3-204ENST00000585740 ELOA2Q8IYF1 753 aaPredicted RBP12.95□□□□□ -0.34
LIG3-204ENST00000585740 CCDC82Q8N4S0 544 aa12.95□□□□□ -0.34
LIG3-204ENST00000585740 KRI1Q8N9T8 703 aaKnown RBP12.95□□□□□ -0.34
LIG3-204ENST00000585740 PNMA1Q8ND90 353 aa12.95□□□□□ -0.34
LIG3-204ENST00000585740 NEDD1Q8NHV4 660 aa12.95□□□□□ -0.34
LIG3-204ENST00000585740 ZNF622Q969S3 477 aaKnown RBP eCLIP12.95□□□□□ -0.34
LIG3-204ENST00000585740 NAT10Q9H0A0 1025 aaKnown RBP12.95□□□□□ -0.34
LIG3-204ENST00000585740 SH3GLB2Q9NR46 395 aa12.95□□□□□ -0.34
LIG3-204ENST00000585740 USP25Q9UHP3 1055 aa12.95□□□□□ -0.34
LIG3-204ENST00000585740 TAOK2Q9UL54 1235 aa12.95□□□□□ -0.34
LIG3-204ENST00000585740 DAGLAQ9Y4D2 1042 aa12.95□□□□□ -0.34
LIG3-204ENST00000585740 V9GY48 417 aaPredicted RBP12.95□□□□□ -0.34
LIG3-204ENST00000585740 MYO3BQ8WXR4 1341 aa12.94□□□□□ -0.34
LIG3-204ENST00000585740 GOLGA6L6A8MZA4 724 aa12.94□□□□□ -0.34
LIG3-204ENST00000585740 TOMM70O94826 608 aa12.94□□□□□ -0.34
LIG3-204ENST00000585740 ZNF202O95125 648 aa12.94□□□□□ -0.34
LIG3-204ENST00000585740 ADCY5O95622 1261 aa12.94□□□□□ -0.34
LIG3-204ENST00000585740 SCG2P13521 617 aa12.94□□□□□ -0.34
LIG3-204ENST00000585740 PFKFB1P16118 471 aa12.94□□□□□ -0.34
LIG3-204ENST00000585740 RASA1P20936 1047 aa12.94□□□□□ -0.34
LIG3-204ENST00000585740 SYKP43405 635 aa12.94□□□□□ -0.34
LIG3-204ENST00000585740 CDK8P49336 464 aa12.94□□□□□ -0.34
LIG3-204ENST00000585740 ZNF165P49910 485 aa12.94□□□□□ -0.34
LIG3-204ENST00000585740 PFKFB3Q16875 520 aaPredicted RBP12.94□□□□□ -0.34
LIG3-204ENST00000585740 GRIPAP1Q4V328 841 aa12.94□□□□□ -0.34
LIG3-204ENST00000585740 RESP18Q5W5W9 173 aa12.94□□□□□ -0.34
LIG3-204ENST00000585740 HHIPL2Q6UWX4 724 aa12.94□□□□□ -0.34
LIG3-204ENST00000585740 SRBD1Q8N5C6 995 aaKnown RBP12.94□□□□□ -0.34
LIG3-204ENST00000585740 ZNF579Q8NAF0 562 aaKnown RBP12.94□□□□□ -0.34
LIG3-204ENST00000585740 SUPT20HQ8NEM7 779 aa12.94□□□□□ -0.34
LIG3-204ENST00000585740 FBXW7Q969H0 707 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms