RNA–Protein interactions for RNA: ENST00000585630.5

CIRBP-204, Transcript of cold inducible RNA binding protein, human

APPRIS P3 TSL 3 BASIC

Gene CIRBP, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-204	ENST00000585630	TNPO2	O14787	897 aa	Known RBP	19.83	■□□□□ 0.77
CIRBP-204	ENST00000585630	RNF113A	O15541	343 aa	Known RBP	19.83	■□□□□ 0.77
CIRBP-204	ENST00000585630	USP14	P54578	494 aa		19.83	■□□□□ 0.77
CIRBP-204	ENST00000585630	HERVK_113	P62684	666 aa		19.83	■□□□□ 0.77
CIRBP-204	ENST00000585630	OSBP2	Q969R2	916 aa		19.83	■□□□□ 0.77
CIRBP-204	ENST00000585630	DYNLL2	Q96FJ2	89 aa		19.83	■□□□□ 0.77
CIRBP-204	ENST00000585630	STRBP	Q96SI9	672 aa	Known RBP	19.83	■□□□□ 0.77
CIRBP-204	ENST00000585630	ARPP21	Q9UBL0	812 aa	Predicted RBP	19.83	■□□□□ 0.77
CIRBP-204	ENST00000585630	ROBO3	Q96MS0	1386 aa		19.83	■□□□□ 0.76
CIRBP-204	ENST00000585630	CYP2D7	A0A087X1C5	515 aa		19.82	■□□□□ 0.76
CIRBP-204	ENST00000585630	USP17L12	C9JPN9	530 aa		19.82	■□□□□ 0.76
CIRBP-204	ENST00000585630	USP17L21	D6R901	530 aa		19.82	■□□□□ 0.76
CIRBP-204	ENST00000585630	GRK4	P32298	578 aa		19.82	■□□□□ 0.76
CIRBP-204	ENST00000585630	SEPT2	Q15019	361 aa		19.82	■□□□□ 0.76
CIRBP-204	ENST00000585630	ZYX	Q15942	572 aa	Known RBP	19.82	■□□□□ 0.76
CIRBP-204	ENST00000585630	LRRFIP1	Q32MZ4	808 aa	Known RBP	19.82	■□□□□ 0.76
CIRBP-204	ENST00000585630	TMEM179	Q6ZVK1	233 aa		19.82	■□□□□ 0.76
CIRBP-204	ENST00000585630	C16orf86	Q6ZW13	317 aa		19.82	■□□□□ 0.76
CIRBP-204	ENST00000585630	ACER1	Q8TDN7	264 aa		19.82	■□□□□ 0.76
CIRBP-204	ENST00000585630	ZBTB47	Q9UFB7	747 aa	Predicted RBP	19.82	■□□□□ 0.76
CIRBP-204	ENST00000585630	GABRQ	Q9UN88	632 aa		19.82	■□□□□ 0.76
CIRBP-204	ENST00000585630	MYH4	Q9Y623	1939 aa		19.81	■□□□□ 0.76
CIRBP-204	ENST00000585630	SMIM22	K7EJ46	135 aa		19.81	■□□□□ 0.76
CIRBP-204	ENST00000585630	MPHOSPH10	O00566	681 aa	Known RBP	19.81	■□□□□ 0.76
CIRBP-204	ENST00000585630	VCAM1	P19320	739 aa		19.81	■□□□□ 0.76
CIRBP-204	ENST00000585630	ANKRD45	Q5TZF3	282 aa		19.81	■□□□□ 0.76
CIRBP-204	ENST00000585630	CTR9	Q6PD62	1173 aa		19.81	■□□□□ 0.76
CIRBP-204	ENST00000585630	SLAIN1	Q8ND83	568 aa		19.81	■□□□□ 0.76
CIRBP-204	ENST00000585630	GTF3C2	Q8WUA4	911 aa	Predicted RBP	19.81	■□□□□ 0.76
CIRBP-204	ENST00000585630		M0R2C6	588 aa		19.8	■□□□□ 0.76
CIRBP-204	ENST00000585630	GPAA1	O43292	621 aa		19.8	■□□□□ 0.76
CIRBP-204	ENST00000585630	FLT3LG	P49771	235 aa		19.8	■□□□□ 0.76
CIRBP-204	ENST00000585630	IRF5	Q13568	498 aa		19.8	■□□□□ 0.76
CIRBP-204	ENST00000585630	GIMAP6	Q6P9H5	292 aa		19.8	■□□□□ 0.76
CIRBP-204	ENST00000585630	COA7	Q96BR5	231 aa		19.8	■□□□□ 0.76
CIRBP-204	ENST00000585630	P2RX7	Q99572	595 aa	Known RBP	19.8	■□□□□ 0.76
CIRBP-204	ENST00000585630	FSD1	Q9BTV5	496 aa		19.8	■□□□□ 0.76
CIRBP-204	ENST00000585630	GSG1L2	A8MUP6	293 aa		19.79	■□□□□ 0.76
CIRBP-204	ENST00000585630	AKR1B1	P15121	316 aa		19.79	■□□□□ 0.76
CIRBP-204	ENST00000585630	CDK8	P49336	464 aa		19.79	■□□□□ 0.76
CIRBP-204	ENST00000585630	SBK1	Q52WX2	424 aa		19.79	■□□□□ 0.76
CIRBP-204	ENST00000585630	CCDC17	Q96LX7	622 aa		19.79	■□□□□ 0.76
CIRBP-204	ENST00000585630	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	19.79	■□□□□ 0.76
CIRBP-204	ENST00000585630	TXNRD2	Q9NNW7	524 aa		19.79	■□□□□ 0.76
CIRBP-204	ENST00000585630	STAP2	Q9UGK3	403 aa		19.79	■□□□□ 0.76
CIRBP-204	ENST00000585630	COL11A1	P12107	1806 aa	Predicted RBP	19.79	■□□□□ 0.76
CIRBP-204	ENST00000585630	ZNF236	Q9UL36	1845 aa		19.79	■□□□□ 0.76
CIRBP-204	ENST00000585630		A0A1W2PRG0	241 aa		19.78	■□□□□ 0.76
CIRBP-204	ENST00000585630	USP17L15	C9J2P7	530 aa		19.78	■□□□□ 0.76
CIRBP-204	ENST00000585630	USP17L13	C9JLJ4	530 aa		19.78	■□□□□ 0.76
CIRBP-204	ENST00000585630	USP17L11	C9JVI0	530 aa		19.78	■□□□□ 0.76
CIRBP-204	ENST00000585630	USP17L18	D6R9N7	530 aa		19.78	■□□□□ 0.76
CIRBP-204	ENST00000585630	USP17L22	D6RA61	530 aa		19.78	■□□□□ 0.76
CIRBP-204	ENST00000585630	USP17L17	D6RBQ6	530 aa		19.78	■□□□□ 0.76
CIRBP-204	ENST00000585630	USP17L19	D6RCP7	530 aa		19.78	■□□□□ 0.76
CIRBP-204	ENST00000585630	USP17L20	D6RJB6	530 aa		19.78	■□□□□ 0.76
CIRBP-204	ENST00000585630	GNAT2	P19087	354 aa		19.78	■□□□□ 0.76
CIRBP-204	ENST00000585630	USP17L24	Q0WX57	530 aa		19.78	■□□□□ 0.76
CIRBP-204	ENST00000585630	SMC5	Q8IY18	1101 aa		19.78	■□□□□ 0.76
CIRBP-204	ENST00000585630	ADCY3	O60266	1144 aa		19.77	■□□□□ 0.76
CIRBP-204	ENST00000585630	MYC	P01106	439 aa	Predicted RBP	19.77	■□□□□ 0.76
CIRBP-204	ENST00000585630	EN2	P19622	333 aa	Predicted RBP	19.77	■□□□□ 0.76
CIRBP-204	ENST00000585630	PDE1A	P54750	535 aa		19.77	■□□□□ 0.76
CIRBP-204	ENST00000585630	ICA1	Q05084	483 aa		19.77	■□□□□ 0.76
CIRBP-204	ENST00000585630	MTFR1	Q15390	333 aa		19.77	■□□□□ 0.76
CIRBP-204	ENST00000585630	CLEC10A	Q8IUN9	316 aa		19.77	■□□□□ 0.76
CIRBP-204	ENST00000585630	EXOC6	Q8TAG9	804 aa		19.77	■□□□□ 0.76
CIRBP-204	ENST00000585630	PXYLP1	Q8TE99	480 aa		19.77	■□□□□ 0.76
CIRBP-204	ENST00000585630	ERVK-9	P63128	1117 aa		19.76	■□□□□ 0.75
CIRBP-204	ENST00000585630	ERVK-24	P63145	666 aa		19.76	■□□□□ 0.75
CIRBP-204	ENST00000585630	ZMYM1	Q5SVZ6	1142 aa		19.76	■□□□□ 0.75
CIRBP-204	ENST00000585630	POTEE	Q6S8J3	1075 aa		19.76	■□□□□ 0.75
CIRBP-204	ENST00000585630	LBX2	Q6XYB7	198 aa		19.76	■□□□□ 0.75
CIRBP-204	ENST00000585630	CATSPERG	Q6ZRH7	1159 aa		19.76	■□□□□ 0.75
CIRBP-204	ENST00000585630	GPRC5A	Q8NFJ5	357 aa		19.76	■□□□□ 0.75
CIRBP-204	ENST00000585630	RPAP3	Q9H6T3	665 aa	Predicted RBP	19.76	■□□□□ 0.75
CIRBP-204	ENST00000585630	SH2D4A	Q9H788	454 aa		19.76	■□□□□ 0.75
CIRBP-204	ENST00000585630	ARHGEF10L	Q9HCE6	1279 aa		19.76	■□□□□ 0.75
CIRBP-204	ENST00000585630	RBPJL	Q9UBG7	517 aa		19.76	■□□□□ 0.75
CIRBP-204	ENST00000585630	PEX10	O60683	326 aa		19.75	■□□□□ 0.75
CIRBP-204	ENST00000585630	ELN	P15502	786 aa		19.75	■□□□□ 0.75
CIRBP-204	ENST00000585630	UBXN2A	P68543	259 aa		19.75	■□□□□ 0.75
CIRBP-204	ENST00000585630	SEC62	Q99442	399 aa	Known RBP	19.75	■□□□□ 0.75
CIRBP-204	ENST00000585630	PAGR1	Q9BTK6	254 aa		19.75	■□□□□ 0.75
CIRBP-204	ENST00000585630	RWDD1	Q9H446	243 aa	Predicted RBP	19.75	■□□□□ 0.75
CIRBP-204	ENST00000585630	BIN2	Q9UBW5	565 aa	Predicted RBP	19.75	■□□□□ 0.75
CIRBP-204	ENST00000585630	RABGAP1	Q9Y3P9	1069 aa		19.75	■□□□□ 0.75
CIRBP-204	ENST00000585630	SPDYE16	A6NNV3	312 aa	Predicted RBP	19.74	■□□□□ 0.75
CIRBP-204	ENST00000585630	INHA	P05111	366 aa		19.74	■□□□□ 0.75
CIRBP-204	ENST00000585630	CCL5	P13501	91 aa		19.74	■□□□□ 0.75
CIRBP-204	ENST00000585630	MAPK4	P31152	587 aa		19.74	■□□□□ 0.75
CIRBP-204	ENST00000585630	TDO2	P48775	406 aa		19.74	■□□□□ 0.75
CIRBP-204	ENST00000585630	PRPF38B	Q5VTL8	546 aa	Known RBP	19.74	■□□□□ 0.75
CIRBP-204	ENST00000585630	SIAH1	Q8IUQ4	282 aa		19.74	■□□□□ 0.75
CIRBP-204	ENST00000585630	SOCS4	Q8WXH5	440 aa		19.74	■□□□□ 0.75
CIRBP-204	ENST00000585630	LPAR1	Q92633	364 aa		19.74	■□□□□ 0.75
CIRBP-204	ENST00000585630	SHISA4	Q96DD7	197 aa		19.74	■□□□□ 0.75
CIRBP-204	ENST00000585630	LNPK	Q9C0E8	428 aa		19.74	■□□□□ 0.75
CIRBP-204	ENST00000585630	TMX2	Q9Y320	296 aa		19.74	■□□□□ 0.75
CIRBP-204	ENST00000585630	FRMPD3	Q5JV73	1810 aa		19.74	■□□□□ 0.75

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