RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 GPAT2Q6NUI2 795 aa16.44■□□□□ 0.22
PRKCSH-202ENST00000585540 ZNF296Q8WUU4 475 aaPredicted RBP16.44■□□□□ 0.22
PRKCSH-202ENST00000585540 LPAR1Q92633 364 aa16.44■□□□□ 0.22
PRKCSH-202ENST00000585540 FAM227BQ96M60 508 aa16.44■□□□□ 0.22
PRKCSH-202ENST00000585540 FEZ1Q99689 392 aa16.44■□□□□ 0.22
PRKCSH-202ENST00000585540 KANSL2Q9H9L4 492 aa16.44■□□□□ 0.22
PRKCSH-202ENST00000585540 TSKSQ9UJT2 592 aa16.44■□□□□ 0.22
PRKCSH-202ENST00000585540 GREB1LQ9C091 1923 aaPredicted RBP16.44■□□□□ 0.22
PRKCSH-202ENST00000585540 MPHOSPH10O00566 681 aaKnown RBP16.43■□□□□ 0.22
PRKCSH-202ENST00000585540 HSPD1P10809 573 aaKnown RBP16.43■□□□□ 0.22
PRKCSH-202ENST00000585540 GCLCP48506 637 aaPredicted RBP16.43■□□□□ 0.22
PRKCSH-202ENST00000585540 HMGCS2P54868 508 aa16.43■□□□□ 0.22
PRKCSH-202ENST00000585540 SP3Q02447 781 aa16.43■□□□□ 0.22
PRKCSH-202ENST00000585540 MTMR2Q13614 643 aa16.43■□□□□ 0.22
PRKCSH-202ENST00000585540 KIF22Q14807 665 aa16.43■□□□□ 0.22
PRKCSH-202ENST00000585540 CTU1Q7Z7A3 348 aaKnown RBP16.43■□□□□ 0.22
PRKCSH-202ENST00000585540 ZNF444Q8N0Y2 327 aaPredicted RBP16.43■□□□□ 0.22
PRKCSH-202ENST00000585540 DYNLL2Q96FJ2 89 aa16.43■□□□□ 0.22
PRKCSH-202ENST00000585540 DSCC1Q9BVC3 393 aa16.43■□□□□ 0.22
PRKCSH-202ENST00000585540 ICA1Q05084 483 aa16.42■□□□□ 0.22
PRKCSH-202ENST00000585540 BMP2KLQ5H9B9 411 aa16.42■□□□□ 0.22
PRKCSH-202ENST00000585540 CWC27Q6UX04 472 aaKnown RBP16.42■□□□□ 0.22
PRKCSH-202ENST00000585540 SLC44A5Q8NCS7 719 aa16.42■□□□□ 0.22
PRKCSH-202ENST00000585540 RNF41Q9H4P4 317 aaPredicted RBP16.42■□□□□ 0.22
PRKCSH-202ENST00000585540 CTNNA3Q9UI47 895 aa16.42■□□□□ 0.22
PRKCSH-202ENST00000585540 CASP8AP2Q9UKL3 1982 aa16.42■□□□□ 0.22
PRKCSH-202ENST00000585540 ADGRA2Q96PE1 1338 aa16.42■□□□□ 0.22
PRKCSH-202ENST00000585540 RASA1P20936 1047 aa16.41■□□□□ 0.22
PRKCSH-202ENST00000585540 GUCY1A2P33402 732 aa16.41■□□□□ 0.22
PRKCSH-202ENST00000585540 PRMT2P55345 433 aa16.41■□□□□ 0.22
PRKCSH-202ENST00000585540 IRX3P78415 501 aaPredicted RBP16.41■□□□□ 0.22
PRKCSH-202ENST00000585540 C17orf99Q6UX52 265 aa16.41■□□□□ 0.22
PRKCSH-202ENST00000585540 CCDC129Q6ZRS4 1044 aa16.41■□□□□ 0.22
PRKCSH-202ENST00000585540 ZNF589Q86UQ0 364 aaPredicted RBP16.41■□□□□ 0.22
PRKCSH-202ENST00000585540 SMCR8Q8TEV9 937 aaPredicted RBP16.41■□□□□ 0.22
PRKCSH-202ENST00000585540 TMX2Q9Y320 296 aa16.41■□□□□ 0.22
PRKCSH-202ENST00000585540 LAMA4Q16363 1823 aa16.4■□□□□ 0.22
PRKCSH-202ENST00000585540 CYP2D7A0A087X1C5 515 aa16.4■□□□□ 0.22
PRKCSH-202ENST00000585540 FOXP2O15409 715 aa16.4■□□□□ 0.22
PRKCSH-202ENST00000585540 ORC4O43929 436 aa16.4■□□□□ 0.22
PRKCSH-202ENST00000585540 AKR1B1P15121 316 aa16.4■□□□□ 0.22
PRKCSH-202ENST00000585540 JAG1P78504 1218 aa16.4■□□□□ 0.22
PRKCSH-202ENST00000585540 SEPT2Q15019 361 aa16.4■□□□□ 0.22
PRKCSH-202ENST00000585540 FAM110CQ1W6H9 321 aa16.4■□□□□ 0.22
PRKCSH-202ENST00000585540 COL13A1Q5TAT6 717 aaPredicted RBP16.4■□□□□ 0.22
PRKCSH-202ENST00000585540 CCDC84Q86UT8 332 aaPredicted RBP16.4■□□□□ 0.22
PRKCSH-202ENST00000585540 TNS4Q8IZW8 715 aa16.4■□□□□ 0.22
PRKCSH-202ENST00000585540 NYAP2Q9P242 653 aa16.4■□□□□ 0.22
PRKCSH-202ENST00000585540 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.4■□□□□ 0.22
PRKCSH-202ENST00000585540 USP17L15C9J2P7 530 aa16.39■□□□□ 0.21
PRKCSH-202ENST00000585540 USP17L13C9JLJ4 530 aa16.39■□□□□ 0.21
PRKCSH-202ENST00000585540 USP17L11C9JVI0 530 aa16.39■□□□□ 0.21
PRKCSH-202ENST00000585540 USP17L18D6R9N7 530 aa16.39■□□□□ 0.21
PRKCSH-202ENST00000585540 USP17L22D6RA61 530 aa16.39■□□□□ 0.21
PRKCSH-202ENST00000585540 USP17L17D6RBQ6 530 aa16.39■□□□□ 0.21
PRKCSH-202ENST00000585540 USP17L19D6RCP7 530 aa16.39■□□□□ 0.21
PRKCSH-202ENST00000585540 USP17L20D6RJB6 530 aa16.39■□□□□ 0.21
PRKCSH-202ENST00000585540 FGAP02671 866 aa16.39■□□□□ 0.21
PRKCSH-202ENST00000585540 FGRP09769 529 aa16.39■□□□□ 0.21
PRKCSH-202ENST00000585540 USP17L24Q0WX57 530 aa16.39■□□□□ 0.21
PRKCSH-202ENST00000585540 VPS53Q5VIR6 699 aa16.39■□□□□ 0.21
PRKCSH-202ENST00000585540 GOPCQ9HD26 462 aa16.39■□□□□ 0.21
PRKCSH-202ENST00000585540 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.39■□□□□ 0.21
PRKCSH-202ENST00000585540 MYPNQ86TC9 1320 aa16.39■□□□□ 0.21
PRKCSH-202ENST00000585540 WDR46O15213 610 aaKnown RBP16.38■□□□□ 0.21
PRKCSH-202ENST00000585540 TSPY3P0CV98 308 aa16.38■□□□□ 0.21
PRKCSH-202ENST00000585540 TSPY8P0CW00 308 aa16.38■□□□□ 0.21
PRKCSH-202ENST00000585540 BCRP11274 1271 aa16.38■□□□□ 0.21
PRKCSH-202ENST00000585540 CHMLP26374 656 aa16.38■□□□□ 0.21
PRKCSH-202ENST00000585540 HOXD10P28358 340 aa16.38■□□□□ 0.21
PRKCSH-202ENST00000585540 LACTBP83111 547 aaPredicted RBP16.38■□□□□ 0.21
PRKCSH-202ENST00000585540 EVX2Q03828 476 aa16.38■□□□□ 0.21
PRKCSH-202ENST00000585540 TREML2Q5T2D2 321 aa16.38■□□□□ 0.21
PRKCSH-202ENST00000585540 CASC1Q6TDU7 716 aa16.38■□□□□ 0.21
PRKCSH-202ENST00000585540 LBX2Q6XYB7 198 aa16.38■□□□□ 0.21
PRKCSH-202ENST00000585540 NEDD1Q8NHV4 660 aa16.38■□□□□ 0.21
PRKCSH-202ENST00000585540 VCPKMTQ9H867 229 aa16.38■□□□□ 0.21
PRKCSH-202ENST00000585540 EMILIN3Q9NT22 766 aa16.38■□□□□ 0.21
PRKCSH-202ENST00000585540 DGKZQ13574 1117 aa16.37■□□□□ 0.21
PRKCSH-202ENST00000585540 IMMTQ16891 758 aaKnown RBP16.37■□□□□ 0.21
PRKCSH-202ENST00000585540 STAG1Q8WVM7 1258 aa16.37■□□□□ 0.21
PRKCSH-202ENST00000585540 ASCC2Q9H1I8 757 aaPredicted RBP16.37■□□□□ 0.21
PRKCSH-202ENST00000585540 R3HDMLQ9H3Y0 253 aa16.37■□□□□ 0.21
PRKCSH-202ENST00000585540 IGKV6D-41A0A0C4DH26 115 aa16.36■□□□□ 0.21
PRKCSH-202ENST00000585540 TSPY2A6NKD2 308 aa16.36■□□□□ 0.21
PRKCSH-202ENST00000585540 ZNF213O14771 459 aa16.36■□□□□ 0.21
PRKCSH-202ENST00000585540 TTLL1O95922 423 aa16.36■□□□□ 0.21
PRKCSH-202ENST00000585540 VCAM1P19320 739 aa16.36■□□□□ 0.21
PRKCSH-202ENST00000585540 SHROOM1Q2M3G4 852 aaPredicted RBP16.36■□□□□ 0.21
PRKCSH-202ENST00000585540 CCDC178Q5BJE1 867 aa16.36■□□□□ 0.21
PRKCSH-202ENST00000585540 AKNAD1Q5T1N1 836 aa16.36■□□□□ 0.21
PRKCSH-202ENST00000585540 FBXO46Q6PJ61 603 aaPredicted RBP16.36■□□□□ 0.21
PRKCSH-202ENST00000585540 CATSPERGQ6ZRH7 1159 aa16.36■□□□□ 0.21
PRKCSH-202ENST00000585540 MKL1Q969V6 931 aa16.36■□□□□ 0.21
PRKCSH-202ENST00000585540 EFCC1Q9HA90 598 aa16.36■□□□□ 0.21
PRKCSH-202ENST00000585540 MORF4L1Q9UBU8 362 aa16.36■□□□□ 0.21
PRKCSH-202ENST00000585540 SGSM2O43147 1006 aa16.35■□□□□ 0.21
PRKCSH-202ENST00000585540 CYP2C8P10632 490 aa16.35■□□□□ 0.21
PRKCSH-202ENST00000585540 EEF2P13639 858 aaKnown RBP16.35■□□□□ 0.21
PRKCSH-202ENST00000585540 FCGRTP55899 365 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms