RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 JAG1P78504 1218 aa17.2■□□□□ 0.34
SCAMP4-209ENST00000585335 ATP2B2Q01814 1243 aa17.2■□□□□ 0.34
SCAMP4-209ENST00000585335 SREBF2Q12772 1141 aa17.2■□□□□ 0.34
SCAMP4-209ENST00000585335 SART3Q15020 963 aaKnown RBP17.2■□□□□ 0.34
SCAMP4-209ENST00000585335 REM2Q8IYK8 340 aaPredicted RBP17.2■□□□□ 0.34
SCAMP4-209ENST00000585335 CNKSR2Q8WXI2 1034 aa17.2■□□□□ 0.34
SCAMP4-209ENST00000585335 UBAC1Q9BSL1 405 aa17.2■□□□□ 0.34
SCAMP4-209ENST00000585335 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.2■□□□□ 0.34
SCAMP4-209ENST00000585335 AFG3L2Q9Y4W6 797 aa17.2■□□□□ 0.34
SCAMP4-209ENST00000585335 WDR33Q9C0J8 1336 aaKnown RBP17.2■□□□□ 0.34
SCAMP4-209ENST00000585335 USP17L10C9JJH3 530 aa17.19■□□□□ 0.34
SCAMP4-209ENST00000585335 TTLL1O95922 423 aa17.19■□□□□ 0.34
SCAMP4-209ENST00000585335 HMGB1P09429 215 aaKnown RBP17.19■□□□□ 0.34
SCAMP4-209ENST00000585335 CETPP11597 493 aa17.19■□□□□ 0.34
SCAMP4-209ENST00000585335 GUCY1A2P33402 732 aa17.19■□□□□ 0.34
SCAMP4-209ENST00000585335 VEGFBP49765 207 aa17.19■□□□□ 0.34
SCAMP4-209ENST00000585335 USP14P54578 494 aa17.19■□□□□ 0.34
SCAMP4-209ENST00000585335 INHBEP58166 350 aa17.19■□□□□ 0.34
SCAMP4-209ENST00000585335 SPP2Q13103 211 aa17.19■□□□□ 0.34
SCAMP4-209ENST00000585335 SHROOM1Q2M3G4 852 aaPredicted RBP17.19■□□□□ 0.34
SCAMP4-209ENST00000585335 TSGA10IPQ3SY00 556 aa17.19■□□□□ 0.34
SCAMP4-209ENST00000585335 CCDC84Q86UT8 332 aaPredicted RBP17.19■□□□□ 0.34
SCAMP4-209ENST00000585335 TCP11L1Q9NUJ3 509 aa17.19■□□□□ 0.34
SCAMP4-209ENST00000585335 TMOD4Q9NZQ9 345 aa17.19■□□□□ 0.34
SCAMP4-209ENST00000585335 NYAP2Q9P242 653 aa17.19■□□□□ 0.34
SCAMP4-209ENST00000585335 KCNH4Q9UQ05 1017 aa17.19■□□□□ 0.34
SCAMP4-209ENST00000585335 TACC3Q9Y6A5 838 aa17.19■□□□□ 0.34
SCAMP4-209ENST00000585335 ERICH2A1L162 156 aa17.18■□□□□ 0.34
SCAMP4-209ENST00000585335 C19orf81C9J6K1 198 aa17.18■□□□□ 0.34
SCAMP4-209ENST00000585335 PSMA5P28066 241 aa17.18■□□□□ 0.34
SCAMP4-209ENST00000585335 GJA5P36382 358 aa17.18■□□□□ 0.34
SCAMP4-209ENST00000585335 MAP2K2P36507 400 aa17.18■□□□□ 0.34
SCAMP4-209ENST00000585335 FASTKD5Q7L8L6 764 aaKnown RBP17.18■□□□□ 0.34
SCAMP4-209ENST00000585335 KCNB2Q92953 911 aa17.18■□□□□ 0.34
SCAMP4-209ENST00000585335 CEP95Q96GE4 821 aa17.18■□□□□ 0.34
SCAMP4-209ENST00000585335 MTMR4Q9NYA4 1195 aa17.18■□□□□ 0.34
SCAMP4-209ENST00000585335 ZSWIM5Q9P217 1185 aa17.18■□□□□ 0.34
SCAMP4-209ENST00000585335 SYNPO2Q9UMS6 1093 aa17.18■□□□□ 0.34
SCAMP4-209ENST00000585335 IGKV6D-41A0A0C4DH26 115 aa17.17■□□□□ 0.34
SCAMP4-209ENST00000585335 EEF2P13639 858 aaKnown RBP17.17■□□□□ 0.34
SCAMP4-209ENST00000585335 MCM5P33992 734 aa17.17■□□□□ 0.34
SCAMP4-209ENST00000585335 BACE1P56817 501 aa17.17■□□□□ 0.34
SCAMP4-209ENST00000585335 MTMR2Q13614 643 aa17.17■□□□□ 0.34
SCAMP4-209ENST00000585335 OTUD7BQ6GQQ9 843 aa17.17■□□□□ 0.34
SCAMP4-209ENST00000585335 USP17L2Q6R6M4 530 aa17.17■□□□□ 0.34
SCAMP4-209ENST00000585335 STOX1Q6ZVD7 989 aa17.17■□□□□ 0.34
SCAMP4-209ENST00000585335 TTC14Q96N46 770 aa17.17■□□□□ 0.34
SCAMP4-209ENST00000585335 NEK1Q96PY6 1258 aa17.17■□□□□ 0.34
SCAMP4-209ENST00000585335 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.17■□□□□ 0.34
SCAMP4-209ENST00000585335 KIAA1683Q9H0B3 1180 aa17.17■□□□□ 0.34
SCAMP4-209ENST00000585335 GOPCQ9HD26 462 aa17.17■□□□□ 0.34
SCAMP4-209ENST00000585335 CLIP2Q9UDT6 1046 aa17.17■□□□□ 0.34
SCAMP4-209ENST00000585335 STX8Q9UNK0 236 aa17.17■□□□□ 0.34
SCAMP4-209ENST00000585335 SNX14Q9Y5W7 946 aa17.17■□□□□ 0.34
SCAMP4-209ENST00000585335 TAF6LQ9Y6J9 622 aa17.17■□□□□ 0.34
SCAMP4-209ENST00000585335 GREB1LQ9C091 1923 aaPredicted RBP17.17■□□□□ 0.34
SCAMP4-209ENST00000585335 CCL15-CCL14A0A0B4J2E2 113 aa17.16■□□□□ 0.34
SCAMP4-209ENST00000585335 A0A0G2JLL6 359 aaPredicted RBP17.16■□□□□ 0.34
SCAMP4-209ENST00000585335 ANAPC15P60006 121 aa17.16■□□□□ 0.34
SCAMP4-209ENST00000585335 KIF23Q02241 960 aaPredicted RBP17.16■□□□□ 0.34
SCAMP4-209ENST00000585335 CCL15Q16663 113 aa17.16■□□□□ 0.34
SCAMP4-209ENST00000585335 GADL1Q6ZQY3 521 aa17.16■□□□□ 0.34
SCAMP4-209ENST00000585335 PRRT2Q7Z6L0 340 aaPredicted RBP17.16■□□□□ 0.34
SCAMP4-209ENST00000585335 CLEC10AQ8IUN9 316 aa17.16■□□□□ 0.34
SCAMP4-209ENST00000585335 RASEFQ8IZ41 740 aa17.16■□□□□ 0.34
SCAMP4-209ENST00000585335 PROCA1Q8NCQ7 364 aaPredicted RBP17.16■□□□□ 0.34
SCAMP4-209ENST00000585335 JAKMIP1Q96N16 626 aaKnown RBP17.16■□□□□ 0.34
SCAMP4-209ENST00000585335 ZSCAN10Q96SZ4 725 aaPredicted RBP17.16■□□□□ 0.34
SCAMP4-209ENST00000585335 PHIPQ8WWQ0 1821 aa17.16■□□□□ 0.34
SCAMP4-209ENST00000585335 AOC2O75106 756 aa17.15■□□□□ 0.34
SCAMP4-209ENST00000585335 SEC24BO95487 1268 aa17.15■□□□□ 0.34
SCAMP4-209ENST00000585335 HMGCS2P54868 508 aa17.15■□□□□ 0.34
SCAMP4-209ENST00000585335 PABPC4Q13310 644 aaKnown RBP eCLIP17.15■□□□□ 0.34
SCAMP4-209ENST00000585335 ZYXQ15942 572 aaKnown RBP17.15■□□□□ 0.34
SCAMP4-209ENST00000585335 DGKHQ86XP1 1220 aa17.15■□□□□ 0.34
SCAMP4-209ENST00000585335 MB21D2Q8IYB1 491 aaPredicted RBP17.15■□□□□ 0.34
SCAMP4-209ENST00000585335 ACER1Q8TDN7 264 aa17.15■□□□□ 0.34
SCAMP4-209ENST00000585335 MTA3Q9BTC8 594 aa17.15■□□□□ 0.34
SCAMP4-209ENST00000585335 TMX2Q9Y320 296 aa17.15■□□□□ 0.34
SCAMP4-209ENST00000585335 IFIT3O14879 490 aaKnown RBP17.14■□□□□ 0.33
SCAMP4-209ENST00000585335 PRC1O43663 620 aa17.14■□□□□ 0.33
SCAMP4-209ENST00000585335 RAD21O60216 631 aa17.14■□□□□ 0.33
SCAMP4-209ENST00000585335 NMT2O60551 498 aa17.14■□□□□ 0.33
SCAMP4-209ENST00000585335 TOP1P11387 765 aaKnown RBP17.14■□□□□ 0.33
SCAMP4-209ENST00000585335 SH3D19Q5HYK7 790 aa17.14■□□□□ 0.33
SCAMP4-209ENST00000585335 BLOC1S2Q6QNY1 142 aa17.14■□□□□ 0.33
SCAMP4-209ENST00000585335 CYB5R4Q7L1T6 521 aa17.14■□□□□ 0.33
SCAMP4-209ENST00000585335 LPAR1Q92633 364 aa17.14■□□□□ 0.33
SCAMP4-209ENST00000585335 MS4A4AQ96JQ5 239 aa17.14■□□□□ 0.33
SCAMP4-209ENST00000585335 TMEM87BQ96K49 555 aa17.14■□□□□ 0.33
SCAMP4-209ENST00000585335 ZKSCAN3Q9BRR0 538 aa17.14■□□□□ 0.33
SCAMP4-209ENST00000585335 BACH2Q9BYV9 841 aa17.14■□□□□ 0.33
SCAMP4-209ENST00000585335 IL17RBQ9NRM6 502 aa17.14■□□□□ 0.33
SCAMP4-209ENST00000585335 TNKSO95271 1327 aa17.14■□□□□ 0.33
SCAMP4-209ENST00000585335 WDR19Q8NEZ3 1342 aa17.14■□□□□ 0.33
SCAMP4-209ENST00000585335 TESPA1A2RU30 521 aaPredicted RBP17.13■□□□□ 0.33
SCAMP4-209ENST00000585335 FGD1P98174 961 aa17.13■□□□□ 0.33
SCAMP4-209ENST00000585335 TMEM67Q5HYA8 995 aa17.13■□□□□ 0.33
SCAMP4-209ENST00000585335 IFIT1BQ5T764 474 aaKnown RBP17.13■□□□□ 0.33
SCAMP4-209ENST00000585335 DHX32Q7L7V1 743 aaKnown RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms