RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 HERVK_113P62684 666 aa21.69■■□□□ 1.06
SRSF1-208ENST00000584773 TAOK2Q9UL54 1235 aa21.69■■□□□ 1.06
SRSF1-208ENST00000584773 PLXNB2O15031 1838 aa21.68■■□□□ 1.06
SRSF1-208ENST00000584773 A0A1W2PRG0 241 aa21.68■■□□□ 1.06
SRSF1-208ENST00000584773 M0R2C6 588 aa21.68■■□□□ 1.06
SRSF1-208ENST00000584773 AKR1B1P15121 316 aa21.68■■□□□ 1.06
SRSF1-208ENST00000584773 ANKRD45Q5TZF3 282 aa21.68■■□□□ 1.06
SRSF1-208ENST00000584773 C12orf60Q5U649 245 aa21.68■■□□□ 1.06
SRSF1-208ENST00000584773 C12orf42Q96LP6 360 aa21.68■■□□□ 1.06
SRSF1-208ENST00000584773 STRBPQ96SI9 672 aaKnown RBP21.68■■□□□ 1.06
SRSF1-208ENST00000584773 TTC41PQ6P2S7 1318 aa21.68■■□□□ 1.06
SRSF1-208ENST00000584773 SALL3Q9BXA9 1300 aa21.68■■□□□ 1.06
SRSF1-208ENST00000584773 RNF113AO15541 343 aaKnown RBP21.67■■□□□ 1.06
SRSF1-208ENST00000584773 VCAM1P19320 739 aa21.67■■□□□ 1.06
SRSF1-208ENST00000584773 CTR9Q6PD62 1173 aa21.67■■□□□ 1.06
SRSF1-208ENST00000584773 APPBP2Q92624 585 aa21.67■■□□□ 1.06
SRSF1-208ENST00000584773 PAGR1Q9BTK6 254 aa21.67■■□□□ 1.06
SRSF1-208ENST00000584773 KIAA1683Q9H0B3 1180 aa21.67■■□□□ 1.06
SRSF1-208ENST00000584773 RBPJLQ9UBG7 517 aa21.67■■□□□ 1.06
SRSF1-208ENST00000584773 MORF4L1Q9UBU8 362 aa21.67■■□□□ 1.06
SRSF1-208ENST00000584773 BIN2Q9UBW5 565 aaPredicted RBP21.67■■□□□ 1.06
SRSF1-208ENST00000584773 ADCY3O60266 1144 aa21.66■■□□□ 1.06
SRSF1-208ENST00000584773 MX1P20591 662 aa21.66■■□□□ 1.06
SRSF1-208ENST00000584773 CDK8P49336 464 aa21.66■■□□□ 1.06
SRSF1-208ENST00000584773 Q3C1V9 767 aa21.66■■□□□ 1.06
SRSF1-208ENST00000584773 STK11IPQ8N1F8 1099 aa21.66■■□□□ 1.06
SRSF1-208ENST00000584773 SEC62Q99442 399 aaKnown RBP21.66■■□□□ 1.06
SRSF1-208ENST00000584773 SWAP70Q9UH65 585 aa21.66■■□□□ 1.06
SRSF1-208ENST00000584773 GSG1L2A8MUP6 293 aa21.65■■□□□ 1.06
SRSF1-208ENST00000584773 CCL5P13501 91 aa21.65■■□□□ 1.06
SRSF1-208ENST00000584773 HDAC1Q13547 482 aaPredicted RBP21.65■■□□□ 1.06
SRSF1-208ENST00000584773 KIAA1755Q5JYT7 1200 aa21.65■■□□□ 1.06
SRSF1-208ENST00000584773 SLAIN1Q8ND83 568 aa21.65■■□□□ 1.06
SRSF1-208ENST00000584773 COA7Q96BR5 231 aa21.65■■□□□ 1.06
SRSF1-208ENST00000584773 EPB41L4AQ9HCS5 686 aaPredicted RBP21.65■■□□□ 1.06
SRSF1-208ENST00000584773 ERC2O15083 957 aa21.64■■□□□ 1.05
SRSF1-208ENST00000584773 GPAA1O43292 621 aa21.64■■□□□ 1.05
SRSF1-208ENST00000584773 GLRX3O76003 335 aaKnown RBP21.64■■□□□ 1.05
SRSF1-208ENST00000584773 USP14P54578 494 aa21.64■■□□□ 1.05
SRSF1-208ENST00000584773 C16orf86Q6ZW13 317 aa21.64■■□□□ 1.05
SRSF1-208ENST00000584773 SIAH1Q8IUQ4 282 aa21.64■■□□□ 1.05
SRSF1-208ENST00000584773 EXOC6Q8TAG9 804 aa21.64■■□□□ 1.05
SRSF1-208ENST00000584773 SHISA4Q96DD7 197 aa21.64■■□□□ 1.05
SRSF1-208ENST00000584773 UNC93B1Q9H1C4 597 aa21.64■■□□□ 1.05
SRSF1-208ENST00000584773 PORCNQ9H237 461 aa21.64■■□□□ 1.05
SRSF1-208ENST00000584773 RPAP3Q9H6T3 665 aaPredicted RBP21.64■■□□□ 1.05
SRSF1-208ENST00000584773 USP17L15C9J2P7 530 aa21.63■■□□□ 1.05
SRSF1-208ENST00000584773 USP17L13C9JLJ4 530 aa21.63■■□□□ 1.05
SRSF1-208ENST00000584773 USP17L11C9JVI0 530 aa21.63■■□□□ 1.05
SRSF1-208ENST00000584773 USP17L18D6R9N7 530 aa21.63■■□□□ 1.05
SRSF1-208ENST00000584773 USP17L22D6RA61 530 aa21.63■■□□□ 1.05
SRSF1-208ENST00000584773 USP17L17D6RBQ6 530 aa21.63■■□□□ 1.05
SRSF1-208ENST00000584773 USP17L19D6RCP7 530 aa21.63■■□□□ 1.05
SRSF1-208ENST00000584773 USP17L20D6RJB6 530 aa21.63■■□□□ 1.05
SRSF1-208ENST00000584773 CNMDO75829 334 aa21.63■■□□□ 1.05
SRSF1-208ENST00000584773 INHAP05111 366 aa21.63■■□□□ 1.05
SRSF1-208ENST00000584773 ERVK-9P63128 1117 aa21.63■■□□□ 1.05
SRSF1-208ENST00000584773 ERVK-24P63145 666 aa21.63■■□□□ 1.05
SRSF1-208ENST00000584773 USP17L24Q0WX57 530 aa21.63■■□□□ 1.05
SRSF1-208ENST00000584773 IRF5Q13568 498 aa21.63■■□□□ 1.05
SRSF1-208ENST00000584773 CATSPERGQ6ZRH7 1159 aa21.63■■□□□ 1.05
SRSF1-208ENST00000584773 TMEM179Q6ZVK1 233 aa21.63■■□□□ 1.05
SRSF1-208ENST00000584773 GPRC5AQ8NFJ5 357 aa21.63■■□□□ 1.05
SRSF1-208ENST00000584773 DDRGK1Q96HY6 314 aa21.63■■□□□ 1.05
SRSF1-208ENST00000584773 FSD1Q9BTV5 496 aa21.63■■□□□ 1.05
SRSF1-208ENST00000584773 GJD2Q9UKL4 321 aa21.63■■□□□ 1.05
SRSF1-208ENST00000584773 AMOTL1Q8IY63 956 aa21.62■■□□□ 1.05
SRSF1-208ENST00000584773 RNF208Q9H0X6 261 aa21.62■■□□□ 1.05
SRSF1-208ENST00000584773 ZFYP08048 801 aaPredicted RBP21.61■■□□□ 1.05
SRSF1-208ENST00000584773 UBXN2AP68543 259 aa21.61■■□□□ 1.05
SRSF1-208ENST00000584773 ICA1Q05084 483 aa21.61■■□□□ 1.05
SRSF1-208ENST00000584773 GCC1Q96CN9 775 aa21.61■■□□□ 1.05
SRSF1-208ENST00000584773 ARPP21Q9UBL0 812 aaPredicted RBP21.61■■□□□ 1.05
SRSF1-208ENST00000584773 RLFQ13129 1914 aa21.61■■□□□ 1.05
SRSF1-208ENST00000584773 MINDY4BA8MYZ0 360 aa21.6■■□□□ 1.05
SRSF1-208ENST00000584773 TRIM32Q13049 653 aa21.6■■□□□ 1.05
SRSF1-208ENST00000584773 PXYLP1Q8TE99 480 aa21.6■■□□□ 1.05
SRSF1-208ENST00000584773 BTBD7Q9P203 1132 aa21.6■■□□□ 1.05
SRSF1-208ENST00000584773 SPDYE16A6NNV3 312 aaPredicted RBP21.59■■□□□ 1.05
SRSF1-208ENST00000584773 IGHDP01880 384 aa21.59■■□□□ 1.05
SRSF1-208ENST00000584773 B4GALNT3Q6L9W6 998 aa21.59■■□□□ 1.05
SRSF1-208ENST00000584773 CCDC129Q6ZRS4 1044 aa21.59■■□□□ 1.05
SRSF1-208ENST00000584773 SPICE1Q8N0Z3 855 aa21.59■■□□□ 1.05
SRSF1-208ENST00000584773 GREB1LQ9C091 1923 aaPredicted RBP21.59■■□□□ 1.05
SRSF1-208ENST00000584773 LNPKQ9C0E8 428 aa21.59■■□□□ 1.05
SRSF1-208ENST00000584773 ZBTB47Q9UFB7 747 aaPredicted RBP21.59■■□□□ 1.05
SRSF1-208ENST00000584773 CYP2B6P20813 491 aa21.58■■□□□ 1.05
SRSF1-208ENST00000584773 TDO2P48775 406 aa21.58■■□□□ 1.05
SRSF1-208ENST00000584773 PDE1AP54750 535 aa21.58■■□□□ 1.05
SRSF1-208ENST00000584773 ATP2B2Q01814 1243 aa21.58■■□□□ 1.05
SRSF1-208ENST00000584773 SBK1Q52WX2 424 aa21.58■■□□□ 1.05
SRSF1-208ENST00000584773 ZMYM1Q5SVZ6 1142 aa21.58■■□□□ 1.05
SRSF1-208ENST00000584773 CCDC17Q96LX7 622 aa21.58■■□□□ 1.05
SRSF1-208ENST00000584773 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.58■■□□□ 1.05
SRSF1-208ENST00000584773 APPP05067 770 aa21.57■■□□□ 1.04
SRSF1-208ENST00000584773 GJB1P08034 283 aa21.57■■□□□ 1.04
SRSF1-208ENST00000584773 EEF2P13639 858 aaKnown RBP21.57■■□□□ 1.04
SRSF1-208ENST00000584773 RASA1P20936 1047 aa21.57■■□□□ 1.04
SRSF1-208ENST00000584773 PRPF38BQ5VTL8 546 aaKnown RBP21.57■■□□□ 1.04
SRSF1-208ENST00000584773 GPR142Q7Z601 462 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms