RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 TCP10L2B9ZVM9 353 aa16.3■□□□□ 0.2
UBBP4-202ENST00000584755 AKR1B1P15121 316 aa16.3■□□□□ 0.2
UBBP4-202ENST00000584755 FUT2Q10981 343 aa16.3■□□□□ 0.2
UBBP4-202ENST00000584755 CDC37L1Q7L3B6 337 aa16.3■□□□□ 0.2
UBBP4-202ENST00000584755 NBPF11Q86T75 865 aa16.3■□□□□ 0.2
UBBP4-202ENST00000584755 ZSCAN29Q8IWY8 852 aaPredicted RBP16.3■□□□□ 0.2
UBBP4-202ENST00000584755 CRACR2BQ8N4Y2 399 aaPredicted RBP16.3■□□□□ 0.2
UBBP4-202ENST00000584755 PNMA1Q8ND90 353 aa16.3■□□□□ 0.2
UBBP4-202ENST00000584755 NUP133Q8WUM0 1156 aa16.3■□□□□ 0.2
UBBP4-202ENST00000584755 CEP95Q96GE4 821 aa16.3■□□□□ 0.2
UBBP4-202ENST00000584755 KAT14Q9H8E8 782 aa16.3■□□□□ 0.2
UBBP4-202ENST00000584755 HERC5Q9UII4 1024 aaKnown RBP16.3■□□□□ 0.2
UBBP4-202ENST00000584755 FMNL1O95466 1100 aaPredicted RBP16.29■□□□□ 0.2
UBBP4-202ENST00000584755 EGFRP00533 1210 aa16.29■□□□□ 0.2
UBBP4-202ENST00000584755 CSRNP1Q96S65 589 aa16.29■□□□□ 0.2
UBBP4-202ENST00000584755 TMEM47Q9BQJ4 181 aa16.29■□□□□ 0.2
UBBP4-202ENST00000584755 MTMR4Q9NYA4 1195 aa16.29■□□□□ 0.2
UBBP4-202ENST00000584755 VPS37CA5D8V6 355 aaPredicted RBP16.29■□□□□ 0.2
UBBP4-202ENST00000584755 DDX11L8A8MPP1 907 aa16.29■□□□□ 0.2
UBBP4-202ENST00000584755 TBC1D12O60347 775 aa16.29■□□□□ 0.2
UBBP4-202ENST00000584755 TOP1P11387 765 aaKnown RBP16.29■□□□□ 0.2
UBBP4-202ENST00000584755 MAP3K10Q02779 954 aa16.29■□□□□ 0.2
UBBP4-202ENST00000584755 FOXD4L5Q5VV16 416 aaPredicted RBP16.29■□□□□ 0.2
UBBP4-202ENST00000584755 TMTC3Q6ZXV5 915 aa16.29■□□□□ 0.2
UBBP4-202ENST00000584755 FOXD4L4Q8WXT5 416 aaPredicted RBP16.29■□□□□ 0.2
UBBP4-202ENST00000584755 PHKBQ93100 1093 aa16.29■□□□□ 0.2
UBBP4-202ENST00000584755 VEZTQ9HBM0 779 aa16.29■□□□□ 0.2
UBBP4-202ENST00000584755 GPRC5DQ9NZD1 345 aa16.29■□□□□ 0.2
UBBP4-202ENST00000584755 ATP6V1DQ9Y5K8 247 aa16.29■□□□□ 0.2
UBBP4-202ENST00000584755 SLURP2P0DP57 97 aa16.28■□□□□ 0.2
UBBP4-202ENST00000584755 SSRP1Q08945 709 aaKnown RBP16.28■□□□□ 0.2
UBBP4-202ENST00000584755 GRM4Q14833 912 aa16.28■□□□□ 0.2
UBBP4-202ENST00000584755 PPP4R3BQ5MIZ7 849 aa16.28■□□□□ 0.2
UBBP4-202ENST00000584755 CTCFLQ8NI51 663 aaPredicted RBP16.28■□□□□ 0.2
UBBP4-202ENST00000584755 RNF26Q9BY78 433 aaPredicted RBP16.28■□□□□ 0.2
UBBP4-202ENST00000584755 STX8Q9UNK0 236 aa16.28■□□□□ 0.2
UBBP4-202ENST00000584755 H3BQV1 296 aa16.27■□□□□ 0.19
UBBP4-202ENST00000584755 H7C1D1 291 aa16.27■□□□□ 0.19
UBBP4-202ENST00000584755 PPFIA3O75145 1194 aa16.27■□□□□ 0.19
UBBP4-202ENST00000584755 KIF5BP33176 963 aa16.27■□□□□ 0.19
UBBP4-202ENST00000584755 TNNI2P48788 182 aa16.27■□□□□ 0.19
UBBP4-202ENST00000584755 KIF4BQ2VIQ3 1234 aa16.27■□□□□ 0.19
UBBP4-202ENST00000584755 CERKLQ49MI3 558 aaPredicted RBP16.27■□□□□ 0.19
UBBP4-202ENST00000584755 IFFO2Q5TF58 517 aa16.27■□□□□ 0.19
UBBP4-202ENST00000584755 SAMD7Q7Z3H4 446 aa16.27■□□□□ 0.19
UBBP4-202ENST00000584755 FBXO18Q8NFZ0 1043 aa16.27■□□□□ 0.19
UBBP4-202ENST00000584755 RNF181Q9P0P0 153 aa16.27■□□□□ 0.19
UBBP4-202ENST00000584755 FAM196BA6NMK8 535 aa16.26■□□□□ 0.19
UBBP4-202ENST00000584755 PLEKHA8P1O95397 391 aa16.26■□□□□ 0.19
UBBP4-202ENST00000584755 TTLL1O95922 423 aa16.26■□□□□ 0.19
UBBP4-202ENST00000584755 RESTQ13127 1097 aa16.26■□□□□ 0.19
UBBP4-202ENST00000584755 TNFAIP1Q13829 316 aa16.26■□□□□ 0.19
UBBP4-202ENST00000584755 NBR1Q14596 966 aa16.26■□□□□ 0.19
UBBP4-202ENST00000584755 TBC1D10BQ4KMP7 808 aaPredicted RBP16.26■□□□□ 0.19
UBBP4-202ENST00000584755 TRIM22Q8IYM9 498 aa16.26■□□□□ 0.19
UBBP4-202ENST00000584755 WASF1Q92558 559 aa16.26■□□□□ 0.19
UBBP4-202ENST00000584755 C8orf76Q96K31 380 aa16.26■□□□□ 0.19
UBBP4-202ENST00000584755 SLC26A6Q9BXS9 759 aa16.26■□□□□ 0.19
UBBP4-202ENST00000584755 TRIM34Q9BYJ4 488 aa16.26■□□□□ 0.19
UBBP4-202ENST00000584755 TMEM39BQ9GZU3 492 aa16.26■□□□□ 0.19
UBBP4-202ENST00000584755 ZSCAN16Q9H4T2 348 aaPredicted RBP16.26■□□□□ 0.19
UBBP4-202ENST00000584755 CNTNAP5Q8WYK1 1306 aa16.25■□□□□ 0.19
UBBP4-202ENST00000584755 PALM3A6NDB9 673 aaPredicted RBP16.25■□□□□ 0.19
UBBP4-202ENST00000584755 PRPF3O43395 683 aaKnown RBP16.25■□□□□ 0.19
UBBP4-202ENST00000584755 DEXIO95424 95 aa16.25■□□□□ 0.19
UBBP4-202ENST00000584755 PTMSP20962 102 aa16.25■□□□□ 0.19
UBBP4-202ENST00000584755 GNAQP50148 359 aa16.25■□□□□ 0.19
UBBP4-202ENST00000584755 TMEM179Q6ZVK1 233 aa16.25■□□□□ 0.19
UBBP4-202ENST00000584755 SRBD1Q8N5C6 995 aaKnown RBP16.25■□□□□ 0.19
UBBP4-202ENST00000584755 MKL1Q969V6 931 aa16.25■□□□□ 0.19
UBBP4-202ENST00000584755 TEPSINQ96N21 525 aa16.25■□□□□ 0.19
UBBP4-202ENST00000584755 ALG1Q9BT22 464 aa16.25■□□□□ 0.19
UBBP4-202ENST00000584755 MAD2L2Q9UI95 211 aa16.25■□□□□ 0.19
UBBP4-202ENST00000584755 UTRNP46939 3433 aa16.25■□□□□ 0.19
UBBP4-202ENST00000584755 GOLGA6L22H0YM25 854 aa16.24■□□□□ 0.19
UBBP4-202ENST00000584755 SNHG28P0DPA3 235 aa16.24■□□□□ 0.19
UBBP4-202ENST00000584755 GUCY1A2P33402 732 aa16.24■□□□□ 0.19
UBBP4-202ENST00000584755 RASA3Q14644 834 aa16.24■□□□□ 0.19
UBBP4-202ENST00000584755 RBM26Q5T8P6 1007 aaKnown RBP16.24■□□□□ 0.19
UBBP4-202ENST00000584755 C9orf131Q5VYM1 1079 aa16.24■□□□□ 0.19
UBBP4-202ENST00000584755 KANSL2Q9H9L4 492 aa16.24■□□□□ 0.19
UBBP4-202ENST00000584755 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.24■□□□□ 0.19
UBBP4-202ENST00000584755 NYAP2Q9P242 653 aa16.24■□□□□ 0.19
UBBP4-202ENST00000584755 RRP1BQ14684 758 aaKnown RBP16.23■□□□□ 0.19
UBBP4-202ENST00000584755 PKN1Q16512 942 aa16.23■□□□□ 0.19
UBBP4-202ENST00000584755 ABCB5Q2M3G0 1257 aa16.23■□□□□ 0.19
UBBP4-202ENST00000584755 MCTP1Q6DN14 999 aa16.23■□□□□ 0.19
UBBP4-202ENST00000584755 CDAN1Q8IWY9 1227 aa16.23■□□□□ 0.19
UBBP4-202ENST00000584755 CMTR1Q8N1G2 835 aaKnown RBP16.23■□□□□ 0.19
UBBP4-202ENST00000584755 CHAMP1Q96JM3 812 aa16.23■□□□□ 0.19
UBBP4-202ENST00000584755 AIFM3Q96NN9 605 aa16.23■□□□□ 0.19
UBBP4-202ENST00000584755 LZTS2Q9BRK4 669 aa16.23■□□□□ 0.19
UBBP4-202ENST00000584755 ANP32EQ9BTT0 268 aa16.23■□□□□ 0.19
UBBP4-202ENST00000584755 HACL1Q9UJ83 578 aa16.23■□□□□ 0.19
UBBP4-202ENST00000584755 ASTN2O75129 1339 aaPredicted RBP16.23■□□□□ 0.19
UBBP4-202ENST00000584755 ZC3H4Q9UPT8 1303 aaKnown RBP16.23■□□□□ 0.19
UBBP4-202ENST00000584755 UBE2Q2LH0YL09 131 aa16.22■□□□□ 0.19
UBBP4-202ENST00000584755 MPHOSPH10O00566 681 aaKnown RBP16.22■□□□□ 0.19
UBBP4-202ENST00000584755 SMARCA1P28370 1054 aa16.22■□□□□ 0.19
UBBP4-202ENST00000584755 FERMT3Q86UX7 667 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms