RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 A0A1W2PQ64 194 aa12.84□□□□□ -0.35
TOP3A-217ENST00000584582 A0A1W2PQD8 194 aa12.84□□□□□ -0.35
TOP3A-217ENST00000584582 TMEM232C9JQI7 657 aa12.84□□□□□ -0.35
TOP3A-217ENST00000584582 FGFR2P21802 821 aa12.84□□□□□ -0.35
TOP3A-217ENST00000584582 TXKP42681 527 aa12.84□□□□□ -0.35
TOP3A-217ENST00000584582 TEX35Q5T0J7 233 aa12.84□□□□□ -0.35
TOP3A-217ENST00000584582 STAG2Q8N3U4 1231 aa12.84□□□□□ -0.35
TOP3A-217ENST00000584582 PRIMPOLQ96LW4 560 aa12.84□□□□□ -0.35
TOP3A-217ENST00000584582 MXD3Q9BW11 206 aa12.84□□□□□ -0.35
TOP3A-217ENST00000584582 BIN2Q9UBW5 565 aaPredicted RBP12.84□□□□□ -0.35
TOP3A-217ENST00000584582 NARFQ9UHQ1 456 aa12.84□□□□□ -0.35
TOP3A-217ENST00000584582 IPO7O95373 1038 aaKnown RBP12.84□□□□□ -0.35
TOP3A-217ENST00000584582 WDR66Q8TBY9 1149 aa12.84□□□□□ -0.35
TOP3A-217ENST00000584582 EYA3Q99504 573 aa12.84□□□□□ -0.35
TOP3A-217ENST00000584582 QTRT2Q9H974 415 aaKnown RBP12.84□□□□□ -0.35
TOP3A-217ENST00000584582 CCNT1O60563 726 aaKnown RBP12.84□□□□□ -0.35
TOP3A-217ENST00000584582 STAG1Q8WVM7 1258 aa12.84□□□□□ -0.35
TOP3A-217ENST00000584582 TRIM47Q96LD4 638 aa12.84□□□□□ -0.35
TOP3A-217ENST00000584582 BCL2L12Q9HB09 334 aa12.84□□□□□ -0.35
TOP3A-217ENST00000584582 ZNF287Q9HBT7 754 aa12.84□□□□□ -0.35
TOP3A-217ENST00000584582 TCP11L1Q9NUJ3 509 aa12.84□□□□□ -0.35
TOP3A-217ENST00000584582 U2AF2P26368 475 aaKnown RBP eCLIP12.83□□□□□ -0.363e-6■■□□□ 13
TOP3A-217ENST00000584582 ARHGAP29Q52LW3 1261 aa12.83□□□□□ -0.36
TOP3A-217ENST00000584582 TTF2Q9UNY4 1162 aaKnown RBP12.83□□□□□ -0.36
TOP3A-217ENST00000584582 RFX7Q2KHR2 1363 aa12.83□□□□□ -0.36
TOP3A-217ENST00000584582 TCRBV5S4A2TA0A5A2 114 aa12.83□□□□□ -0.36
TOP3A-217ENST00000584582 KLRF2D3W0D1 207 aa12.83□□□□□ -0.36
TOP3A-217ENST00000584582 CALM1P0DP23 149 aa12.83□□□□□ -0.36
TOP3A-217ENST00000584582 CALM2P0DP24 149 aa12.83□□□□□ -0.36
TOP3A-217ENST00000584582 CALM3P0DP25 149 aa12.83□□□□□ -0.36
TOP3A-217ENST00000584582 SCG2P13521 617 aa12.83□□□□□ -0.36
TOP3A-217ENST00000584582 IQCB1Q15051 598 aa12.83□□□□□ -0.36
TOP3A-217ENST00000584582 CLEC4GQ6UXB4 293 aa12.83□□□□□ -0.36
TOP3A-217ENST00000584582 DTHD1Q6ZMT9 781 aa12.83□□□□□ -0.36
TOP3A-217ENST00000584582 DPF2Q92785 391 aa12.83□□□□□ -0.36
TOP3A-217ENST00000584582 NSUN4Q96CB9 384 aaKnown RBP12.83□□□□□ -0.36
TOP3A-217ENST00000584582 PDCL3Q9H2J4 239 aa12.83□□□□□ -0.36
TOP3A-217ENST00000584582 DBNDD1Q9H9R9 158 aa12.83□□□□□ -0.36
TOP3A-217ENST00000584582 SPATA31A5Q5VU36 1347 aa12.83□□□□□ -0.36
TOP3A-217ENST00000584582 SPATA31A7Q8IWB4 1347 aa12.83□□□□□ -0.36
TOP3A-217ENST00000584582 PP2D1A8MPX8 630 aa12.83□□□□□ -0.36
TOP3A-217ENST00000584582 VEGFAP15692 232 aaPredicted RBP12.83□□□□□ -0.36
TOP3A-217ENST00000584582 ASIC1P78348 528 aa12.83□□□□□ -0.36
TOP3A-217ENST00000584582 GSTO1P78417 241 aa12.83□□□□□ -0.36
TOP3A-217ENST00000584582 ZYXQ15942 572 aaKnown RBP12.83□□□□□ -0.36
TOP3A-217ENST00000584582 DHX40Q8IX18 779 aaKnown RBP12.83□□□□□ -0.36
TOP3A-217ENST00000584582 MYRIPQ8NFW9 859 aa12.83□□□□□ -0.36
TOP3A-217ENST00000584582 SLC16A2P36021 539 aa12.82□□□□□ -0.36
TOP3A-217ENST00000584582 UBXN4Q92575 508 aa12.82□□□□□ -0.36
TOP3A-217ENST00000584582 TAB2Q9NYJ8 693 aa12.82□□□□□ -0.36
TOP3A-217ENST00000584582 PARP1P09874 1014 aaKnown RBP12.82□□□□□ -0.36
TOP3A-217ENST00000584582 SKIDA1Q1XH10 827 aa12.82□□□□□ -0.36
TOP3A-217ENST00000584582 ZNF771Q7L3S4 317 aaPredicted RBP12.82□□□□□ -0.36
TOP3A-217ENST00000584582 DYMQ7RTS9 669 aa12.82□□□□□ -0.36
TOP3A-217ENST00000584582 IQUBQ8NA54 791 aa12.82□□□□□ -0.36
TOP3A-217ENST00000584582 THRAP3Q9Y2W1 955 aaKnown RBP12.82□□□□□ -0.36
TOP3A-217ENST00000584582 CACNA1FO60840 1977 aa12.82□□□□□ -0.36
TOP3A-217ENST00000584582 STIM1Q13586 685 aa12.82□□□□□ -0.36
TOP3A-217ENST00000584582 ENGASEQ8NFI3 743 aa12.82□□□□□ -0.36
TOP3A-217ENST00000584582 RBM28Q9NW13 759 aaKnown RBP12.82□□□□□ -0.36
TOP3A-217ENST00000584582 RIC1Q4ADV7 1423 aa12.81□□□□□ -0.36
TOP3A-217ENST00000584582 ABCC12Q96J65 1359 aa12.81□□□□□ -0.36
TOP3A-217ENST00000584582 APBA3O96018 575 aa12.81□□□□□ -0.36
TOP3A-217ENST00000584582 SLURP2P0DP57 97 aa12.81□□□□□ -0.36
TOP3A-217ENST00000584582 AXDND1Q5T1B0 1012 aaPredicted RBP12.81□□□□□ -0.36
TOP3A-217ENST00000584582 SRBD1Q8N5C6 995 aaKnown RBP12.81□□□□□ -0.36
TOP3A-217ENST00000584582 SRCAPQ6ZRS2 3230 aa12.81□□□□□ -0.36
TOP3A-217ENST00000584582 SGMS1Q86VZ5 419 aa12.81□□□□□ -0.36
TOP3A-217ENST00000584582 CCDC150Q8NCX0 1101 aa12.81□□□□□ -0.36
TOP3A-217ENST00000584582 CCDC12Q8WUD4 166 aaPredicted RBP12.81□□□□□ -0.36
TOP3A-217ENST00000584582 AGXT2Q9BYV1 514 aa12.81□□□□□ -0.36
TOP3A-217ENST00000584582 MTIF2P46199 727 aaKnown RBP12.81□□□□□ -0.36
TOP3A-217ENST00000584582 PLCD1P51178 756 aa12.81□□□□□ -0.36
TOP3A-217ENST00000584582 KIF4BQ2VIQ3 1234 aa12.81□□□□□ -0.36
TOP3A-217ENST00000584582 DPP8Q6V1X1 898 aaPredicted RBP12.81□□□□□ -0.36
TOP3A-217ENST00000584582 RBM17Q96I25 401 aaKnown RBP12.81□□□□□ -0.36
TOP3A-217ENST00000584582 FAM217BQ9NTX9 383 aaPredicted RBP12.81□□□□□ -0.36
TOP3A-217ENST00000584582 ARPP21Q9UBL0 812 aaPredicted RBP12.81□□□□□ -0.36
TOP3A-217ENST00000584582 MAN1B1Q9UKM7 699 aa12.81□□□□□ -0.36
TOP3A-217ENST00000584582 NEMFO60524 1076 aa12.8□□□□□ -0.36
TOP3A-217ENST00000584582 GRIK5Q16478 980 aa12.8□□□□□ -0.36
TOP3A-217ENST00000584582 EARS2Q5JPH6 523 aaKnown RBP12.8□□□□□ -0.36
TOP3A-217ENST00000584582 KANK3Q6NY19 840 aa12.8□□□□□ -0.36
TOP3A-217ENST00000584582 METTL16Q86W50 562 aaKnown RBP12.8□□□□□ -0.36
TOP3A-217ENST00000584582 COA7Q96BR5 231 aa12.8□□□□□ -0.36
TOP3A-217ENST00000584582 IL17RAQ96F46 866 aa12.8□□□□□ -0.36
TOP3A-217ENST00000584582 RNF26Q9BY78 433 aaPredicted RBP12.8□□□□□ -0.36
TOP3A-217ENST00000584582 TBC1D7Q9P0N9 293 aa12.8□□□□□ -0.36
TOP3A-217ENST00000584582 ZNF215Q9UL58 517 aaPredicted RBP12.8□□□□□ -0.36
TOP3A-217ENST00000584582 TACC3Q9Y6A5 838 aa12.8□□□□□ -0.36
TOP3A-217ENST00000584582 TECP42680 631 aa12.8□□□□□ -0.36
TOP3A-217ENST00000584582 ELF2Q15723 593 aa12.8□□□□□ -0.36
TOP3A-217ENST00000584582 RBM26Q5T8P6 1007 aaKnown RBP12.8□□□□□ -0.36
TOP3A-217ENST00000584582 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.8□□□□□ -0.36
TOP3A-217ENST00000584582 BLIDQ8IZY5 108 aa12.8□□□□□ -0.36
TOP3A-217ENST00000584582 RRP36Q96EU6 259 aaKnown RBP12.8□□□□□ -0.36
TOP3A-217ENST00000584582 MRFAP1L1Q96HT8 127 aa12.8□□□□□ -0.36
TOP3A-217ENST00000584582 USP40Q9NVE5 1235 aa12.8□□□□□ -0.36
TOP3A-217ENST00000584582 SMCO2A6NFE2 343 aa12.8□□□□□ -0.36
TOP3A-217ENST00000584582 CALML3P27482 149 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms