RNA–Protein interactions for RNA: ENST00000584550.1

GGA3-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-219ENST00000584550 PTPREP23469 700 aa12.55□□□□□ -0.4
GGA3-219ENST00000584550 TFCP2Q12800 502 aa12.55□□□□□ -0.4
GGA3-219ENST00000584550 MAPKAPK5Q8IW41 473 aa12.55□□□□□ -0.4
GGA3-219ENST00000584550 TGFBRAP1Q8WUH2 860 aa12.55□□□□□ -0.4
GGA3-219ENST00000584550 API5Q9BZZ5 524 aaKnown RBP12.55□□□□□ -0.4
GGA3-219ENST00000584550 DNAJC18Q9H819 358 aa12.55□□□□□ -0.4
GGA3-219ENST00000584550 AATFQ9NY61 560 aaKnown RBP eCLIP12.55□□□□□ -0.4
GGA3-219ENST00000584550 PDS5AQ29RF7 1337 aaKnown RBP12.55□□□□□ -0.4
GGA3-219ENST00000584550 SLC15A5A6NIM6 579 aa12.54□□□□□ -0.4
GGA3-219ENST00000584550 KBTBD13C9JR72 458 aa12.54□□□□□ -0.4
GGA3-219ENST00000584550 ITGB8P26012 769 aa12.54□□□□□ -0.4
GGA3-219ENST00000584550 ADCYAP1R1P41586 468 aa12.54□□□□□ -0.4
GGA3-219ENST00000584550 EPHB4P54760 987 aa12.54□□□□□ -0.4
GGA3-219ENST00000584550 CCNA1P78396 465 aa12.54□□□□□ -0.4
GGA3-219ENST00000584550 USP17L2Q6R6M4 530 aa12.54□□□□□ -0.4
GGA3-219ENST00000584550 SPATA5Q8NB90 893 aa12.54□□□□□ -0.4
GGA3-219ENST00000584550 ARRDC4Q8NCT1 418 aa12.54□□□□□ -0.4
GGA3-219ENST00000584550 GTF3C2Q8WUA4 911 aaPredicted RBP12.54□□□□□ -0.4
GGA3-219ENST00000584550 RNPC3Q96LT9 517 aaKnown RBP12.54□□□□□ -0.4
GGA3-219ENST00000584550 NOL10Q9BSC4 688 aaKnown RBP12.54□□□□□ -0.4
GGA3-219ENST00000584550 PDLIM7Q9NR12 457 aa12.54□□□□□ -0.4
GGA3-219ENST00000584550 LRP2BPQ9P2M1 347 aa12.54□□□□□ -0.4
GGA3-219ENST00000584550 SAP30BPQ9UHR5 308 aaKnown RBP12.54□□□□□ -0.4
GGA3-219ENST00000584550 PALD1Q9ULE6 856 aa12.54□□□□□ -0.4
GGA3-219ENST00000584550 ZBTB21Q9ULJ3 1066 aa12.54□□□□□ -0.4
GGA3-219ENST00000584550 RABGAP1Q9Y3P9 1069 aa12.54□□□□□ -0.4
GGA3-219ENST00000584550 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.54□□□□□ -0.4
GGA3-219ENST00000584550 IVNS1ABPQ9Y6Y0 642 aa12.54□□□□□ -0.4
GGA3-219ENST00000584550 IPO8O15397 1037 aaKnown RBP12.53□□□□□ -0.4
GGA3-219ENST00000584550 MAP4K4O95819 1239 aaPredicted RBP12.53□□□□□ -0.4
GGA3-219ENST00000584550 MVPQ14764 893 aaKnown RBP12.53□□□□□ -0.4
GGA3-219ENST00000584550 PRAMEF19Q5SWL8 479 aa12.53□□□□□ -0.4
GGA3-219ENST00000584550 GORABQ5T7V8 394 aa12.53□□□□□ -0.4
GGA3-219ENST00000584550 DPP9Q86TI2 863 aa12.53□□□□□ -0.4
GGA3-219ENST00000584550 CLUAP1Q96AJ1 413 aa12.53□□□□□ -0.4
GGA3-219ENST00000584550 FEZ1Q99689 392 aa12.53□□□□□ -0.4
GGA3-219ENST00000584550 DHX36Q9H2U1 1008 aaKnown RBP12.53□□□□□ -0.4
GGA3-219ENST00000584550 BTBD7Q9P203 1132 aa12.53□□□□□ -0.4
GGA3-219ENST00000584550 TNNQ9UQP3 1299 aa12.53□□□□□ -0.4
GGA3-219ENST00000584550 USP17L15C9J2P7 530 aa12.52□□□□□ -0.41
GGA3-219ENST00000584550 USP17L13C9JLJ4 530 aa12.52□□□□□ -0.41
GGA3-219ENST00000584550 USP17L11C9JVI0 530 aa12.52□□□□□ -0.41
GGA3-219ENST00000584550 USP17L18D6R9N7 530 aa12.52□□□□□ -0.41
GGA3-219ENST00000584550 USP17L22D6RA61 530 aa12.52□□□□□ -0.41
GGA3-219ENST00000584550 USP17L17D6RBQ6 530 aa12.52□□□□□ -0.41
GGA3-219ENST00000584550 USP17L19D6RCP7 530 aa12.52□□□□□ -0.41
GGA3-219ENST00000584550 USP17L20D6RJB6 530 aa12.52□□□□□ -0.41
GGA3-219ENST00000584550 ZBTB22O15209 634 aa12.52□□□□□ -0.41
GGA3-219ENST00000584550 GH2P01242 217 aa12.52□□□□□ -0.41
GGA3-219ENST00000584550 CYBAP13498 195 aa12.52□□□□□ -0.41
GGA3-219ENST00000584550 TLE2Q04725 743 aa12.52□□□□□ -0.41
GGA3-219ENST00000584550 USP17L24Q0WX57 530 aa12.52□□□□□ -0.41
GGA3-219ENST00000584550 GRB14Q14449 540 aa12.52□□□□□ -0.41
GGA3-219ENST00000584550 FOXP4Q8IVH2 680 aaPredicted RBP12.52□□□□□ -0.41
GGA3-219ENST00000584550 FAM122AQ96E09 287 aa12.52□□□□□ -0.41
GGA3-219ENST00000584550 COPRSQ9NQ92 184 aa12.52□□□□□ -0.41
GGA3-219ENST00000584550 AKAP2Q9Y2D5 859 aa12.52□□□□□ -0.41
GGA3-219ENST00000584550 HOXC6P09630 235 aa12.51□□□□□ -0.41
GGA3-219ENST00000584550 PLA2G5P39877 138 aa12.51□□□□□ -0.41
GGA3-219ENST00000584550 RAB3GAP1Q15042 981 aa12.51□□□□□ -0.41
GGA3-219ENST00000584550 CATSPERGQ6ZRH7 1159 aa12.51□□□□□ -0.41
GGA3-219ENST00000584550 ZNF576Q9H609 170 aa12.51□□□□□ -0.41
GGA3-219ENST00000584550 SNRKQ9NRH2 765 aa12.51□□□□□ -0.41
GGA3-219ENST00000584550 FLT1P17948 1338 aa12.51□□□□□ -0.41
GGA3-219ENST00000584550 BAG3O95817 575 aa12.5□□□□□ -0.41
GGA3-219ENST00000584550 TRIM27P14373 513 aa12.5□□□□□ -0.41
GGA3-219ENST00000584550 DNAJB2P25686 324 aa12.5□□□□□ -0.41
GGA3-219ENST00000584550 MCAMP43121 646 aa12.5□□□□□ -0.41
GGA3-219ENST00000584550 SNX17Q15036 470 aa12.5□□□□□ -0.41
GGA3-219ENST00000584550 LRRC41Q15345 812 aa12.5□□□□□ -0.41
GGA3-219ENST00000584550 CCDC85BQ15834 202 aaPredicted RBP12.5□□□□□ -0.41
GGA3-219ENST00000584550 ZKSCAN2Q63HK3 967 aa12.5□□□□□ -0.41
GGA3-219ENST00000584550 NAA16Q6N069 864 aaPredicted RBP12.5□□□□□ -0.41
GGA3-219ENST00000584550 ATF7IPQ6VMQ6 1270 aa12.5□□□□□ -0.41
GGA3-219ENST00000584550 ADGRA1Q86SQ6 560 aa12.5□□□□□ -0.41
GGA3-219ENST00000584550 METTL16Q86W50 562 aaKnown RBP12.5□□□□□ -0.41
GGA3-219ENST00000584550 ARHGAP45Q92619 1136 aa12.5□□□□□ -0.41
GGA3-219ENST00000584550 CDK5RAP2Q96SN8 1893 aa12.5□□□□□ -0.41
GGA3-219ENST00000584550 SEPT4O43236 478 aa12.49□□□□□ -0.41
GGA3-219ENST00000584550 PQBP1O60828 265 aaKnown RBP12.49□□□□□ -0.41
GGA3-219ENST00000584550 CLTBP09497 229 aa12.49□□□□□ -0.41
GGA3-219ENST00000584550 RAG1P15918 1043 aa12.49□□□□□ -0.41
GGA3-219ENST00000584550 VCAM1P19320 739 aa12.49□□□□□ -0.41
GGA3-219ENST00000584550 ADORA2AP29274 412 aa12.49□□□□□ -0.41
GGA3-219ENST00000584550 MAP3K12Q12852 859 aa12.49□□□□□ -0.41
GGA3-219ENST00000584550 ACER1Q8TDN7 264 aa12.49□□□□□ -0.41
GGA3-219ENST00000584550 ADAMTS19Q8TE59 1207 aa12.49□□□□□ -0.41
GGA3-219ENST00000584550 RPAP3Q9H6T3 665 aaPredicted RBP12.49□□□□□ -0.41
GGA3-219ENST00000584550 GINM1Q9NU53 330 aa12.49□□□□□ -0.41
GGA3-219ENST00000584550 TACC3Q9Y6A5 838 aa12.49□□□□□ -0.41
GGA3-219ENST00000584550 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.48□□□□□ -0.41
GGA3-219ENST00000584550 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.48□□□□□ -0.41
GGA3-219ENST00000584550 SRGAP3O43295 1099 aa12.48□□□□□ -0.41
GGA3-219ENST00000584550 COBLO75128 1261 aa12.48□□□□□ -0.41
GGA3-219ENST00000584550 IGHA2P01877 340 aa12.48□□□□□ -0.41
GGA3-219ENST00000584550 HLA-DOAP06340 250 aa12.48□□□□□ -0.41
GGA3-219ENST00000584550 DYNLL1P63167 89 aaKnown RBP12.48□□□□□ -0.41
GGA3-219ENST00000584550 FPGSQ05932 587 aa12.48□□□□□ -0.41
GGA3-219ENST00000584550 FAM47AQ5JRC9 791 aa12.48□□□□□ -0.41
GGA3-219ENST00000584550 TIFAQ96CG3 184 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms