RNA–Protein interactions for RNA: ENST00000583908.1

NARF-222, Transcript of nuclear prelamin A recognition factor, human

TSL 3

Gene NARF, Length 430 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NARF-222	ENST00000583908	ALX1	Q15699	326 aa		11.76	□□□□□ -0.53
NARF-222	ENST00000583908	BMP2KL	Q5H9B9	411 aa		11.76	□□□□□ -0.53
NARF-222	ENST00000583908	SH3D19	Q5HYK7	790 aa		11.76	□□□□□ -0.53
NARF-222	ENST00000583908	FAM43A	Q8N2R8	423 aa		11.76	□□□□□ -0.53
NARF-222	ENST00000583908	DYNLL2	Q96FJ2	89 aa		11.76	□□□□□ -0.53
NARF-222	ENST00000583908	PTPN18	Q99952	460 aa		11.76	□□□□□ -0.53
NARF-222	ENST00000583908	KANSL2	Q9H9L4	492 aa		11.76	□□□□□ -0.53
NARF-222	ENST00000583908	BAZ2A	Q9UIF9	1905 aa	Known RBP	11.76	□□□□□ -0.53
NARF-222	ENST00000583908	CYP2D7	A0A087X1C5	515 aa		11.75	□□□□□ -0.53
NARF-222	ENST00000583908	TLR2	O60603	784 aa		11.75	□□□□□ -0.53
NARF-222	ENST00000583908	TSPY3	P0CV98	308 aa		11.75	□□□□□ -0.53
NARF-222	ENST00000583908	TSPY8	P0CW00	308 aa		11.75	□□□□□ -0.53
NARF-222	ENST00000583908	SLURP2	P0DP57	97 aa		11.75	□□□□□ -0.53
NARF-222	ENST00000583908	PKN2	Q16513	984 aa	Known RBP	11.75	□□□□□ -0.53
NARF-222	ENST00000583908	IMMT	Q16891	758 aa	Known RBP	11.75	□□□□□ -0.53
NARF-222	ENST00000583908	KIAA1211	Q6ZU35	1233 aa		11.75	□□□□□ -0.53
NARF-222	ENST00000583908	SLC44A5	Q8NCS7	719 aa		11.75	□□□□□ -0.53
NARF-222	ENST00000583908	ZNF296	Q8WUU4	475 aa	Predicted RBP	11.75	□□□□□ -0.53
NARF-222	ENST00000583908	LPAR1	Q92633	364 aa		11.75	□□□□□ -0.53
NARF-222	ENST00000583908	DSCC1	Q9BVC3	393 aa		11.75	□□□□□ -0.53
NARF-222	ENST00000583908	KIAA1683	Q9H0B3	1180 aa		11.75	□□□□□ -0.53
NARF-222	ENST00000583908	GOPC	Q9HD26	462 aa		11.75	□□□□□ -0.53
NARF-222	ENST00000583908	TOMM22	Q9NS69	142 aa		11.75	□□□□□ -0.53
NARF-222	ENST00000583908	LOC285556	D6RIA3	1793 aa		11.74	□□□□□ -0.53
NARF-222	ENST00000583908	TSPY2	A6NKD2	308 aa		11.74	□□□□□ -0.53
NARF-222	ENST00000583908	ZNF213	O14771	459 aa		11.74	□□□□□ -0.53
NARF-222	ENST00000583908	AKR1B1	P15121	316 aa		11.74	□□□□□ -0.53
NARF-222	ENST00000583908	GCLC	P48506	637 aa	Predicted RBP	11.74	□□□□□ -0.53
NARF-222	ENST00000583908	ATP2B2	Q01814	1243 aa		11.74	□□□□□ -0.53
NARF-222	ENST00000583908	SP3	Q02447	781 aa		11.74	□□□□□ -0.53
NARF-222	ENST00000583908	RRP1B	Q14684	758 aa	Known RBP	11.74	□□□□□ -0.53
NARF-222	ENST00000583908	SEPT2	Q15019	361 aa		11.74	□□□□□ -0.53
NARF-222	ENST00000583908	CTU1	Q7Z7A3	348 aa	Known RBP	11.74	□□□□□ -0.53
NARF-222	ENST00000583908	ZNF589	Q86UQ0	364 aa	Predicted RBP	11.74	□□□□□ -0.53
NARF-222	ENST00000583908	CCDC84	Q86UT8	332 aa	Predicted RBP	11.74	□□□□□ -0.53
NARF-222	ENST00000583908	TNS4	Q8IZW8	715 aa		11.74	□□□□□ -0.53
NARF-222	ENST00000583908	C12orf42	Q96LP6	360 aa		11.74	□□□□□ -0.53
NARF-222	ENST00000583908	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	11.74	□□□□□ -0.53
NARF-222	ENST00000583908	ANAPC4	Q9UJX5	808 aa		11.74	□□□□□ -0.53
NARF-222	ENST00000583908	SYNPO2	Q9UMS6	1093 aa		11.74	□□□□□ -0.53
NARF-222	ENST00000583908	GNRH1	P01148	92 aa		11.73	□□□□□ -0.53
NARF-222	ENST00000583908	FGA	P02671	866 aa		11.73	□□□□□ -0.53
NARF-222	ENST00000583908	CHML	P26374	656 aa		11.73	□□□□□ -0.53
NARF-222	ENST00000583908	ZYX	Q15942	572 aa	Known RBP	11.73	□□□□□ -0.53
NARF-222	ENST00000583908	VPS53	Q5VIR6	699 aa		11.73	□□□□□ -0.53
NARF-222	ENST00000583908	STK11IP	Q8N1F8	1099 aa		11.73	□□□□□ -0.53
NARF-222	ENST00000583908	PHIP	Q8WWQ0	1821 aa		11.73	□□□□□ -0.53
NARF-222	ENST00000583908	PLIN4	Q96Q06	1357 aa		11.73	□□□□□ -0.53
NARF-222	ENST00000583908	USP17L15	C9J2P7	530 aa		11.72	□□□□□ -0.53
NARF-222	ENST00000583908	USP17L13	C9JLJ4	530 aa		11.72	□□□□□ -0.53
NARF-222	ENST00000583908	USP17L11	C9JVI0	530 aa		11.72	□□□□□ -0.53
NARF-222	ENST00000583908	USP17L18	D6R9N7	530 aa		11.72	□□□□□ -0.53
NARF-222	ENST00000583908	USP17L22	D6RA61	530 aa		11.72	□□□□□ -0.53
NARF-222	ENST00000583908	USP17L17	D6RBQ6	530 aa		11.72	□□□□□ -0.53
NARF-222	ENST00000583908	USP17L19	D6RCP7	530 aa		11.72	□□□□□ -0.53
NARF-222	ENST00000583908	USP17L20	D6RJB6	530 aa		11.72	□□□□□ -0.53
NARF-222	ENST00000583908	ORC4	O43929	436 aa		11.72	□□□□□ -0.53
NARF-222	ENST00000583908	TTLL1	O95922	423 aa		11.72	□□□□□ -0.53
NARF-222	ENST00000583908	RASA1	P20936	1047 aa		11.72	□□□□□ -0.53
NARF-222	ENST00000583908	HOXD10	P28358	340 aa		11.72	□□□□□ -0.53
NARF-222	ENST00000583908	HOXA7	P31268	230 aa	Predicted RBP	11.72	□□□□□ -0.53
NARF-222	ENST00000583908	USP17L24	Q0WX57	530 aa		11.72	□□□□□ -0.53
NARF-222	ENST00000583908	TRDN	Q13061	729 aa		11.72	□□□□□ -0.53
NARF-222	ENST00000583908	MOGS	Q13724	837 aa		11.72	□□□□□ -0.53
NARF-222	ENST00000583908	GPAT2	Q6NUI2	795 aa		11.72	□□□□□ -0.53
NARF-222	ENST00000583908	MFSD6	Q6ZSS7	791 aa		11.72	□□□□□ -0.53
NARF-222	ENST00000583908	ESR2	Q92731	530 aa		11.72	□□□□□ -0.53
NARF-222	ENST00000583908	CNNM2	Q9H8M5	875 aa		11.72	□□□□□ -0.53
NARF-222	ENST00000583908	TMX2	Q9Y320	296 aa		11.72	□□□□□ -0.53
NARF-222	ENST00000583908		U3KPZ7	1027 aa	Predicted RBP	11.72	□□□□□ -0.53
NARF-222	ENST00000583908	PTPRF	P10586	1907 aa		11.72	□□□□□ -0.53
NARF-222	ENST00000583908	WDR46	O15213	610 aa	Known RBP	11.71	□□□□□ -0.53
NARF-222	ENST00000583908	RAD21	O60216	631 aa		11.71	□□□□□ -0.53
NARF-222	ENST00000583908	RANBP6	O60518	1105 aa	Known RBP	11.71	□□□□□ -0.53
NARF-222	ENST00000583908	CDC45	O75419	566 aa		11.71	□□□□□ -0.53
NARF-222	ENST00000583908	PRDM1	O75626	825 aa		11.71	□□□□□ -0.53
NARF-222	ENST00000583908	CYP2C8	P10632	490 aa		11.71	□□□□□ -0.53
NARF-222	ENST00000583908	VCAM1	P19320	739 aa		11.71	□□□□□ -0.53
NARF-222	ENST00000583908	PRMT2	P55345	433 aa		11.71	□□□□□ -0.53
NARF-222	ENST00000583908	FCGRT	P55899	365 aa		11.71	□□□□□ -0.53
NARF-222	ENST00000583908	DGKZ	Q13574	1117 aa		11.71	□□□□□ -0.53
NARF-222	ENST00000583908	FAM110C	Q1W6H9	321 aa		11.71	□□□□□ -0.53
NARF-222	ENST00000583908	CCDC178	Q5BJE1	867 aa		11.71	□□□□□ -0.53
NARF-222	ENST00000583908	RRP12	Q5JTH9	1297 aa	Known RBP	11.71	□□□□□ -0.53
NARF-222	ENST00000583908	AKNAD1	Q5T1N1	836 aa		11.71	□□□□□ -0.53
NARF-222	ENST00000583908	TREML2	Q5T2D2	321 aa		11.71	□□□□□ -0.53
NARF-222	ENST00000583908	IQCA1	Q86XH1	822 aa		11.71	□□□□□ -0.53
NARF-222	ENST00000583908	CCAR1	Q8IX12	1150 aa	Known RBP	11.71	□□□□□ -0.53
NARF-222	ENST00000583908	NEDD1	Q8NHV4	660 aa		11.71	□□□□□ -0.53
NARF-222	ENST00000583908	STAG1	Q8WVM7	1258 aa		11.71	□□□□□ -0.53
NARF-222	ENST00000583908	TANGO6	Q9C0B7	1094 aa		11.71	□□□□□ -0.53
NARF-222	ENST00000583908	VCPKMT	Q9H867	229 aa		11.71	□□□□□ -0.53
NARF-222	ENST00000583908	EFCC1	Q9HA90	598 aa		11.71	□□□□□ -0.53
NARF-222	ENST00000583908	CWC22	Q9HCG8	908 aa	Known RBP	11.71	□□□□□ -0.53
NARF-222	ENST00000583908	NYAP2	Q9P242	653 aa		11.71	□□□□□ -0.53
NARF-222	ENST00000583908	SGSM2	O43147	1006 aa		11.7	□□□□□ -0.54
NARF-222	ENST00000583908	EIF5B	O60841	1220 aa	Known RBP	11.7	□□□□□ -0.54
NARF-222	ENST00000583908	EEF2	P13639	858 aa	Known RBP	11.7	□□□□□ -0.54
NARF-222	ENST00000583908	GUCY1A2	P33402	732 aa		11.7	□□□□□ -0.54
NARF-222	ENST00000583908	CCNA1	P78396	465 aa		11.7	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms