RNA–Protein interactions for RNA: ENST00000583877.5

NUP85-223, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-223ENST00000583877 RBPJLQ9UBG7 517 aa10.75□□□□□ -0.69
NUP85-223ENST00000583877 COL11A1P12107 1806 aaPredicted RBP10.74□□□□□ -0.69
NUP85-223ENST00000583877 NAV1Q8NEY1 1877 aa10.74□□□□□ -0.69
NUP85-223ENST00000583877 TTC28Q96AY4 2481 aa10.74□□□□□ -0.69
NUP85-223ENST00000583877 PEX10O60683 326 aa10.74□□□□□ -0.69
NUP85-223ENST00000583877 BAG3O95817 575 aa10.74□□□□□ -0.69
NUP85-223ENST00000583877 GNAI3P08754 354 aa10.74□□□□□ -0.69
NUP85-223ENST00000583877 UQCRFS1P1P0C7P4 283 aa10.74□□□□□ -0.69
NUP85-223ENST00000583877 PLCG2P16885 1265 aa10.74□□□□□ -0.69
NUP85-223ENST00000583877 CCND3P30281 292 aaPredicted RBP10.74□□□□□ -0.69
NUP85-223ENST00000583877 MCAMP43121 646 aa10.74□□□□□ -0.69
NUP85-223ENST00000583877 JAG1P78504 1218 aa10.74□□□□□ -0.69
NUP85-223ENST00000583877 LRRC26Q2I0M4 334 aa10.74□□□□□ -0.69
NUP85-223ENST00000583877 FAM109BQ6ICB4 259 aaPredicted RBP10.74□□□□□ -0.69
NUP85-223ENST00000583877 GPR142Q7Z601 462 aa10.74□□□□□ -0.69
NUP85-223ENST00000583877 PLEKHH3Q7Z736 793 aa10.74□□□□□ -0.69
NUP85-223ENST00000583877 FOXP4Q8IVH2 680 aaPredicted RBP10.74□□□□□ -0.69
NUP85-223ENST00000583877 CCAR1Q8IX12 1150 aaKnown RBP10.74□□□□□ -0.69
NUP85-223ENST00000583877 TRMT2AQ8IZ69 625 aaKnown RBP10.74□□□□□ -0.69
NUP85-223ENST00000583877 APBA2Q99767 749 aa10.74□□□□□ -0.69
NUP85-223ENST00000583877 DNAJC18Q9H819 358 aa10.74□□□□□ -0.69
NUP85-223ENST00000583877 LRP2BPQ9P2M1 347 aa10.74□□□□□ -0.69
NUP85-223ENST00000583877 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.74□□□□□ -0.69
NUP85-223ENST00000583877 NCOR1O75376 2440 aa10.73□□□□□ -0.69
NUP85-223ENST00000583877 POTEB2H3BUK9 544 aa10.73□□□□□ -0.69
NUP85-223ENST00000583877 PPP4CP60510 307 aa10.73□□□□□ -0.69
NUP85-223ENST00000583877 MDM2Q00987 491 aaPredicted RBP10.73□□□□□ -0.69
NUP85-223ENST00000583877 CCL14Q16627 93 aa10.73□□□□□ -0.69
NUP85-223ENST00000583877 Q3C1V9 767 aa10.73□□□□□ -0.69
NUP85-223ENST00000583877 NAA16Q6N069 864 aaPredicted RBP10.73□□□□□ -0.69
NUP85-223ENST00000583877 CDCA7LQ96GN5 454 aa10.73□□□□□ -0.69
NUP85-223ENST00000583877 TRIM34Q9BYJ4 488 aa10.73□□□□□ -0.69
NUP85-223ENST00000583877 PORCNQ9H237 461 aa10.73□□□□□ -0.69
NUP85-223ENST00000583877 AATFQ9NY61 560 aaKnown RBP eCLIP10.73□□□□□ -0.69
NUP85-223ENST00000583877 ZBTB21Q9ULJ3 1066 aa10.73□□□□□ -0.69
NUP85-223ENST00000583877 FLT1P17948 1338 aa10.73□□□□□ -0.69
NUP85-223ENST00000583877 MAP3K13O43283 966 aa10.72□□□□□ -0.69
NUP85-223ENST00000583877 IGSF3O75054 1194 aa10.72□□□□□ -0.69
NUP85-223ENST00000583877 GDF11O95390 407 aa10.72□□□□□ -0.69
NUP85-223ENST00000583877 MAP2K5Q13163 448 aa10.72□□□□□ -0.69
NUP85-223ENST00000583877 USP17L2Q6R6M4 530 aa10.72□□□□□ -0.69
NUP85-223ENST00000583877 POTEEQ6S8J3 1075 aa10.72□□□□□ -0.69
NUP85-223ENST00000583877 CRACR2BQ8N4Y2 399 aaPredicted RBP10.72□□□□□ -0.69
NUP85-223ENST00000583877 TGFBRAP1Q8WUH2 860 aa10.72□□□□□ -0.69
NUP85-223ENST00000583877 ARHGAP45Q92619 1136 aa10.72□□□□□ -0.69
NUP85-223ENST00000583877 KIF12Q96FN5 646 aa10.72□□□□□ -0.69
NUP85-223ENST00000583877 PAGR1Q9BTK6 254 aa10.72□□□□□ -0.69
NUP85-223ENST00000583877 COL25A1Q9BXS0 654 aaPredicted RBP10.72□□□□□ -0.69
NUP85-223ENST00000583877 EMILIN3Q9NT22 766 aa10.72□□□□□ -0.69
NUP85-223ENST00000583877 RABGAP1Q9Y3P9 1069 aa10.72□□□□□ -0.69
NUP85-223ENST00000583877 A0A0G2JMZ2 1700 aa10.72□□□□□ -0.69
NUP85-223ENST00000583877 MSCO60682 206 aa10.71□□□□□ -0.69
NUP85-223ENST00000583877 GLRX3O76003 335 aaKnown RBP10.71□□□□□ -0.69
NUP85-223ENST00000583877 CCNA1P78396 465 aa10.71□□□□□ -0.69
NUP85-223ENST00000583877 SHROOM1Q2M3G4 852 aaPredicted RBP10.71□□□□□ -0.69
NUP85-223ENST00000583877 ATF7IPQ6VMQ6 1270 aa10.71□□□□□ -0.69
NUP85-223ENST00000583877 MAPKAPK5Q8IW41 473 aa10.71□□□□□ -0.69
NUP85-223ENST00000583877 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.71□□□□□ -0.69
NUP85-223ENST00000583877 EDC3Q96F86 508 aaKnown RBP10.71□□□□□ -0.69
NUP85-223ENST00000583877 C12orf42Q96LP6 360 aa10.71□□□□□ -0.69
NUP85-223ENST00000583877 GUCD1Q96NT3 240 aa10.71□□□□□ -0.69
NUP85-223ENST00000583877 LBHD1Q9BQE6 289 aaPredicted RBP10.71□□□□□ -0.69
NUP85-223ENST00000583877 CWC22Q9HCG8 908 aaKnown RBP10.71□□□□□ -0.69
NUP85-223ENST00000583877 PALD1Q9ULE6 856 aa10.71□□□□□ -0.69
NUP85-223ENST00000583877 MYH7P12883 1935 aa10.7□□□□□ -0.7
NUP85-223ENST00000583877 BAZ2AQ9UIF9 1905 aaKnown RBP10.7□□□□□ -0.7
NUP85-223ENST00000583877 ZNF316A6NFI3 1004 aaPredicted RBP10.7□□□□□ -0.7
NUP85-223ENST00000583877 SLC15A5A6NIM6 579 aa10.7□□□□□ -0.7
NUP85-223ENST00000583877 USP17L15C9J2P7 530 aa10.7□□□□□ -0.7
NUP85-223ENST00000583877 USP17L13C9JLJ4 530 aa10.7□□□□□ -0.7
NUP85-223ENST00000583877 USP17L11C9JVI0 530 aa10.7□□□□□ -0.7
NUP85-223ENST00000583877 USP17L18D6R9N7 530 aa10.7□□□□□ -0.7
NUP85-223ENST00000583877 USP17L22D6RA61 530 aa10.7□□□□□ -0.7
NUP85-223ENST00000583877 USP17L17D6RBQ6 530 aa10.7□□□□□ -0.7
NUP85-223ENST00000583877 USP17L19D6RCP7 530 aa10.7□□□□□ -0.7
NUP85-223ENST00000583877 USP17L20D6RJB6 530 aa10.7□□□□□ -0.7
NUP85-223ENST00000583877 CNMDO75829 334 aa10.7□□□□□ -0.7
NUP85-223ENST00000583877 HLA-DOAP06340 250 aa10.7□□□□□ -0.7
NUP85-223ENST00000583877 USP17L24Q0WX57 530 aa10.7□□□□□ -0.7
NUP85-223ENST00000583877 G3BP1Q13283 466 aaKnown RBP eCLIP10.7□□□□□ -0.7
NUP85-223ENST00000583877 MFSD14CQ5VZR4 134 aa10.7□□□□□ -0.7
NUP85-223ENST00000583877 ADGRA1Q86SQ6 560 aa10.7□□□□□ -0.7
NUP85-223ENST00000583877 LPAR1Q92633 364 aa10.7□□□□□ -0.7
NUP85-223ENST00000583877 MFRPQ9BY79 579 aa10.7□□□□□ -0.7
NUP85-223ENST00000583877 SENP6Q9GZR1 1112 aaPredicted RBP10.7□□□□□ -0.7
NUP85-223ENST00000583877 DNM1LO00429 736 aa10.69□□□□□ -0.7
NUP85-223ENST00000583877 GH2P01242 217 aa10.69□□□□□ -0.7
NUP85-223ENST00000583877 GNAI2P04899 355 aa10.69□□□□□ -0.7
NUP85-223ENST00000583877 CYP2E1P05181 493 aaPredicted RBP10.69□□□□□ -0.7
NUP85-223ENST00000583877 HOXC6P09630 235 aa10.69□□□□□ -0.7
NUP85-223ENST00000583877 PTPREP23469 700 aa10.69□□□□□ -0.7
NUP85-223ENST00000583877 RARSP54136 660 aaKnown RBP10.69□□□□□ -0.7
NUP85-223ENST00000583877 USP14P54578 494 aa10.69□□□□□ -0.7
NUP85-223ENST00000583877 CCDC158Q5M9N0 1113 aa10.69□□□□□ -0.7
NUP85-223ENST00000583877 TTC39AQ5SRH9 613 aa10.69□□□□□ -0.7
NUP85-223ENST00000583877 LBX2Q6XYB7 198 aa10.69□□□□□ -0.7
NUP85-223ENST00000583877 CATSPERGQ6ZRH7 1159 aa10.69□□□□□ -0.7
NUP85-223ENST00000583877 GPR108Q9NPR9 543 aa10.69□□□□□ -0.7
NUP85-223ENST00000583877 SNRKQ9NRH2 765 aa10.69□□□□□ -0.7
NUP85-223ENST00000583877 FLRT1Q9NZU1 646 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms