RNA–Protein interactions for RNA: ENST00000583697.1

CDK5RAP3-229, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-229ENST00000583697 USP17L15C9J2P7 530 aa10.54□□□□□ -0.72
CDK5RAP3-229ENST00000583697 USP17L13C9JLJ4 530 aa10.54□□□□□ -0.72
CDK5RAP3-229ENST00000583697 USP17L11C9JVI0 530 aa10.54□□□□□ -0.72
CDK5RAP3-229ENST00000583697 USP17L18D6R9N7 530 aa10.54□□□□□ -0.72
CDK5RAP3-229ENST00000583697 USP17L22D6RA61 530 aa10.54□□□□□ -0.72
CDK5RAP3-229ENST00000583697 USP17L17D6RBQ6 530 aa10.54□□□□□ -0.72
CDK5RAP3-229ENST00000583697 USP17L19D6RCP7 530 aa10.54□□□□□ -0.72
CDK5RAP3-229ENST00000583697 USP17L20D6RJB6 530 aa10.54□□□□□ -0.72
CDK5RAP3-229ENST00000583697 MPHOSPH10O00566 681 aaKnown RBP10.54□□□□□ -0.72
CDK5RAP3-229ENST00000583697 PDE6AP16499 860 aa10.54□□□□□ -0.72
CDK5RAP3-229ENST00000583697 RGS2P41220 211 aa10.54□□□□□ -0.72
CDK5RAP3-229ENST00000583697 CCNA1P78396 465 aa10.54□□□□□ -0.72
CDK5RAP3-229ENST00000583697 USP17L24Q0WX57 530 aa10.54□□□□□ -0.72
CDK5RAP3-229ENST00000583697 WDR78Q5VTH9 848 aa10.54□□□□□ -0.72
CDK5RAP3-229ENST00000583697 AMOTL1Q8IY63 956 aa10.54□□□□□ -0.72
CDK5RAP3-229ENST00000583697 TRMT44Q8IYL2 757 aaKnown RBP10.54□□□□□ -0.72
CDK5RAP3-229ENST00000583697 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.54□□□□□ -0.72
CDK5RAP3-229ENST00000583697 PAWRQ96IZ0 340 aaKnown RBP10.54□□□□□ -0.72
CDK5RAP3-229ENST00000583697 P2RX7Q99572 595 aaKnown RBP10.54□□□□□ -0.72
CDK5RAP3-229ENST00000583697 APBA2Q99767 749 aa10.54□□□□□ -0.72
CDK5RAP3-229ENST00000583697 CRISPLD2Q9H0B8 497 aa10.54□□□□□ -0.72
CDK5RAP3-229ENST00000583697 TXNRD2Q9NNW7 524 aa10.54□□□□□ -0.72
CDK5RAP3-229ENST00000583697 EMILIN3Q9NT22 766 aa10.54□□□□□ -0.72
CDK5RAP3-229ENST00000583697 MCM9Q9NXL9 1143 aa10.54□□□□□ -0.72
CDK5RAP3-229ENST00000583697 ZNF532Q9HCE3 1301 aa10.54□□□□□ -0.72
CDK5RAP3-229ENST00000583697 RAB11FIP3O75154 756 aa10.53□□□□□ -0.72
CDK5RAP3-229ENST00000583697 GLRX3O76003 335 aaKnown RBP10.53□□□□□ -0.72
CDK5RAP3-229ENST00000583697 PRKAR2AP13861 404 aaKnown RBP10.53□□□□□ -0.72
CDK5RAP3-229ENST00000583697 VCAM1P19320 739 aa10.53□□□□□ -0.72
CDK5RAP3-229ENST00000583697 TRIM32Q13049 653 aa10.53□□□□□ -0.72
CDK5RAP3-229ENST00000583697 GPR142Q7Z601 462 aa10.53□□□□□ -0.72
CDK5RAP3-229ENST00000583697 SDR42E1Q8WUS8 393 aa10.53□□□□□ -0.72
CDK5RAP3-229ENST00000583697 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.53□□□□□ -0.723e-7■■■□□ 15.8
CDK5RAP3-229ENST00000583697 KIAA1683Q9H0B3 1180 aa10.53□□□□□ -0.72
CDK5RAP3-229ENST00000583697 PORCNQ9H237 461 aa10.53□□□□□ -0.72
CDK5RAP3-229ENST00000583697 RBM27Q9P2N5 1060 aaKnown RBP10.53□□□□□ -0.72
CDK5RAP3-229ENST00000583697 RBPJLQ9UBG7 517 aa10.53□□□□□ -0.72
CDK5RAP3-229ENST00000583697 GJD2Q9UKL4 321 aa10.53□□□□□ -0.72
CDK5RAP3-229ENST00000583697 DOCK3Q8IZD9 2030 aa10.53□□□□□ -0.72
CDK5RAP3-229ENST00000583697 BAZ2AQ9UIF9 1905 aaKnown RBP10.52□□□□□ -0.72
CDK5RAP3-229ENST00000583697 PEX10O60683 326 aa10.52□□□□□ -0.73
CDK5RAP3-229ENST00000583697 XRCC5P13010 732 aaKnown RBP10.52□□□□□ -0.73
CDK5RAP3-229ENST00000583697 SHMT1P34896 483 aa10.52□□□□□ -0.73
CDK5RAP3-229ENST00000583697 PLCD1P51178 756 aa10.52□□□□□ -0.73
CDK5RAP3-229ENST00000583697 PLEKHH3Q7Z736 793 aa10.52□□□□□ -0.73
CDK5RAP3-229ENST00000583697 LCORLQ8N3X6 602 aa10.52□□□□□ -0.73
CDK5RAP3-229ENST00000583697 DIS3LQ8TF46 1054 aaKnown RBP10.52□□□□□ -0.73
CDK5RAP3-229ENST00000583697 DDRGK1Q96HY6 314 aa10.52□□□□□ -0.73
CDK5RAP3-229ENST00000583697 NBPF3Q9H094 633 aa10.52□□□□□ -0.73
CDK5RAP3-229ENST00000583697 RPAP3Q9H6T3 665 aaPredicted RBP10.52□□□□□ -0.73
CDK5RAP3-229ENST00000583697 PAG1Q9NWQ8 432 aa10.52□□□□□ -0.73
CDK5RAP3-229ENST00000583697 SWAP70Q9UH65 585 aa10.52□□□□□ -0.73
CDK5RAP3-229ENST00000583697 RCAN3Q9UKA8 241 aa10.52□□□□□ -0.73
CDK5RAP3-229ENST00000583697 RABGAP1Q9Y3P9 1069 aa10.52□□□□□ -0.73
CDK5RAP3-229ENST00000583697 IVNS1ABPQ9Y6Y0 642 aa10.52□□□□□ -0.73
CDK5RAP3-229ENST00000583697 ADD2P35612 726 aa10.51□□□□□ -0.73
CDK5RAP3-229ENST00000583697 MAP2K5Q13163 448 aa10.51□□□□□ -0.73
CDK5RAP3-229ENST00000583697 SEPT2Q15019 361 aa10.51□□□□□ -0.73
CDK5RAP3-229ENST00000583697 MAP3K21Q5TCX8 1036 aa10.51□□□□□ -0.73
CDK5RAP3-229ENST00000583697 TMEM179Q6ZVK1 233 aa10.51□□□□□ -0.73
CDK5RAP3-229ENST00000583697 C7orf61Q8IZ16 206 aa10.51□□□□□ -0.73
CDK5RAP3-229ENST00000583697 ACER1Q8TDN7 264 aa10.51□□□□□ -0.73
CDK5RAP3-229ENST00000583697 EDC3Q96F86 508 aaKnown RBP10.51□□□□□ -0.73
CDK5RAP3-229ENST00000583697 TANGO6Q9C0B7 1094 aa10.51□□□□□ -0.73
CDK5RAP3-229ENST00000583697 BOLA2Q9H3K6 86 aa10.51□□□□□ -0.73
CDK5RAP3-229ENST00000583697 C11orf49Q9H6J7 331 aa10.51□□□□□ -0.73
CDK5RAP3-229ENST00000583697 SH2D4AQ9H788 454 aa10.51□□□□□ -0.73
CDK5RAP3-229ENST00000583697 ARMT1Q9H993 441 aa10.51□□□□□ -0.73
CDK5RAP3-229ENST00000583697 ARHGEF10LQ9HCE6 1279 aa10.51□□□□□ -0.73
CDK5RAP3-229ENST00000583697 ZBTB40Q9NUA8 1239 aa10.51□□□□□ -0.73
CDK5RAP3-229ENST00000583697 PARP14Q460N5 1801 aa10.51□□□□□ -0.73
CDK5RAP3-229ENST00000583697 A0A1W2PPC1 479 aa10.5□□□□□ -0.73
CDK5RAP3-229ENST00000583697 TCRBV5S4A2TA0A5A2 114 aa10.5□□□□□ -0.73
CDK5RAP3-229ENST00000583697 SPDYE16A6NNV3 312 aaPredicted RBP10.5□□□□□ -0.73
CDK5RAP3-229ENST00000583697 MBD4O95243 580 aa10.5□□□□□ -0.73
CDK5RAP3-229ENST00000583697 CENPBP07199 599 aaPredicted RBP10.5□□□□□ -0.73
CDK5RAP3-229ENST00000583697 GABPAQ06546 454 aa10.5□□□□□ -0.73
CDK5RAP3-229ENST00000583697 Q3C1V9 767 aa10.5□□□□□ -0.73
CDK5RAP3-229ENST00000583697 ZSCAN25Q6NSZ9 544 aa10.5□□□□□ -0.73
CDK5RAP3-229ENST00000583697 LBX2Q6XYB7 198 aa10.5□□□□□ -0.73
CDK5RAP3-229ENST00000583697 CATSPERGQ6ZRH7 1159 aa10.5□□□□□ -0.73
CDK5RAP3-229ENST00000583697 LRRCC1Q9C099 1032 aa10.5□□□□□ -0.73
CDK5RAP3-229ENST00000583697 DCP1AQ9NPI6 582 aaPredicted RBP10.5□□□□□ -0.73
CDK5RAP3-229ENST00000583697 OGDHLQ9ULD0 1010 aa10.5□□□□□ -0.73
CDK5RAP3-229ENST00000583697 CNMDO75829 334 aa10.49□□□□□ -0.73
CDK5RAP3-229ENST00000583697 ATP5JP18859 108 aa10.49□□□□□ -0.73
CDK5RAP3-229ENST00000583697 ICA1Q05084 483 aa10.49□□□□□ -0.73
CDK5RAP3-229ENST00000583697 CACNB2Q08289 660 aaPredicted RBP10.49□□□□□ -0.73
CDK5RAP3-229ENST00000583697 CCL14Q16627 93 aa10.49□□□□□ -0.73
CDK5RAP3-229ENST00000583697 MORN1Q5T089 497 aa10.49□□□□□ -0.73
CDK5RAP3-229ENST00000583697 MFSD14CQ5VZR4 134 aa10.49□□□□□ -0.73
CDK5RAP3-229ENST00000583697 SIRT2Q8IXJ6 389 aa10.49□□□□□ -0.73
CDK5RAP3-229ENST00000583697 SLC44A5Q8NCS7 719 aa10.49□□□□□ -0.73
CDK5RAP3-229ENST00000583697 GPATCH3Q96I76 525 aa10.49□□□□□ -0.73
CDK5RAP3-229ENST00000583697 HAUS7Q99871 368 aa10.49□□□□□ -0.73
CDK5RAP3-229ENST00000583697 ATP8A2Q9NTI2 1148 aa10.49□□□□□ -0.73
CDK5RAP3-229ENST00000583697 SLC15A5A6NIM6 579 aa10.48□□□□□ -0.73
CDK5RAP3-229ENST00000583697 MSCO60682 206 aa10.48□□□□□ -0.73
CDK5RAP3-229ENST00000583697 CYP2D6P10635 497 aa10.48□□□□□ -0.73
CDK5RAP3-229ENST00000583697 PTPREP23469 700 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms