RNA–Protein interactions for RNA: ENST00000582981.5

TOP3A-214, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,239 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-214ENST00000582981 CPDO75976 1380 aa11.91□□□□□ -0.5
TOP3A-214ENST00000582981 MYH15Q9Y2K3 1946 aa11.91□□□□□ -0.5
TOP3A-214ENST00000582981 MYO5AQ9Y4I1 1855 aaKnown RBP11.9□□□□□ -0.5
TOP3A-214ENST00000582981 IKBKBO14920 756 aa11.9□□□□□ -0.5
TOP3A-214ENST00000582981 CIAO1O76071 339 aa11.9□□□□□ -0.5
TOP3A-214ENST00000582981 RASGRF1Q13972 1273 aa11.9□□□□□ -0.5
TOP3A-214ENST00000582981 BEND6Q5SZJ8 279 aaPredicted RBP11.9□□□□□ -0.5
TOP3A-214ENST00000582981 IFNL3Q8IZI9 196 aa11.9□□□□□ -0.5
TOP3A-214ENST00000582981 ACRBPQ8NEB7 543 aa11.9□□□□□ -0.5
TOP3A-214ENST00000582981 PNKPQ96T60 521 aa11.9□□□□□ -0.5
TOP3A-214ENST00000582981 TMEM94Q12767 1356 aa11.9□□□□□ -0.5
TOP3A-214ENST00000582981 PPFIA4O75335 1185 aa11.9□□□□□ -0.5
TOP3A-214ENST00000582981 CD44P16070 742 aaKnown RBP11.9□□□□□ -0.5
TOP3A-214ENST00000582981 CCT5P48643 541 aa11.9□□□□□ -0.5
TOP3A-214ENST00000582981 EVA1CP58658 441 aa11.9□□□□□ -0.5
TOP3A-214ENST00000582981 GDAP1L1Q96MZ0 367 aa11.9□□□□□ -0.5
TOP3A-214ENST00000582981 STRBPQ96SI9 672 aaKnown RBP11.9□□□□□ -0.5
TOP3A-214ENST00000582981 CEP89Q96ST8 783 aa11.9□□□□□ -0.5
TOP3A-214ENST00000582981 BPIFA3Q9BQP9 254 aa11.9□□□□□ -0.5
TOP3A-214ENST00000582981 SLC4A4Q9Y6R1 1079 aa11.9□□□□□ -0.5
TOP3A-214ENST00000582981 SLIT3O75094 1523 aa11.9□□□□□ -0.5
TOP3A-214ENST00000582981 ANKRD18BA2A2Z9 1011 aa11.9□□□□□ -0.51
TOP3A-214ENST00000582981 H0YHG0 523 aa11.9□□□□□ -0.51
TOP3A-214ENST00000582981 ZNF174Q15697 407 aa11.9□□□□□ -0.51
TOP3A-214ENST00000582981 SWT1Q5T5J6 900 aaKnown RBP11.9□□□□□ -0.51
TOP3A-214ENST00000582981 SMIM5Q71RC9 77 aa11.9□□□□□ -0.51
TOP3A-214ENST00000582981 SHISA4Q96DD7 197 aa11.9□□□□□ -0.51
TOP3A-214ENST00000582981 CDC5LQ99459 802 aaKnown RBP11.9□□□□□ -0.51
TOP3A-214ENST00000582981 SCN11AQ9UI33 1791 aa11.89□□□□□ -0.51
TOP3A-214ENST00000582981 RIC1Q4ADV7 1423 aa11.89□□□□□ -0.51
TOP3A-214ENST00000582981 CBFA2T2O43439 604 aa11.89□□□□□ -0.51
TOP3A-214ENST00000582981 ECM2O94769 699 aaPredicted RBP11.89□□□□□ -0.51
TOP3A-214ENST00000582981 SCP2P22307 547 aa11.89□□□□□ -0.51
TOP3A-214ENST00000582981 HNRNPH1P31943 449 aaKnown RBP11.89□□□□□ -0.51
TOP3A-214ENST00000582981 GSCP56915 257 aaPredicted RBP11.89□□□□□ -0.51
TOP3A-214ENST00000582981 CASP8Q14790 479 aa11.89□□□□□ -0.51
TOP3A-214ENST00000582981 RTN1Q16799 776 aa11.89□□□□□ -0.51
TOP3A-214ENST00000582981 RAD9BQ6WBX8 426 aa11.89□□□□□ -0.51
TOP3A-214ENST00000582981 RPAINQ86UA6 219 aa11.89□□□□□ -0.51
TOP3A-214ENST00000582981 GIMAP7Q8NHV1 300 aa11.89□□□□□ -0.51
TOP3A-214ENST00000582981 PLIN2Q99541 437 aa11.89□□□□□ -0.51
TOP3A-214ENST00000582981 CDKL5O76039 1030 aa11.89□□□□□ -0.51
TOP3A-214ENST00000582981 SAFBQ15424 915 aaKnown RBP eCLIP11.89□□□□□ -0.51
TOP3A-214ENST00000582981 PIGBQ92521 554 aa11.89□□□□□ -0.51
TOP3A-214ENST00000582981 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.89□□□□□ -0.512e-7■■□□□ 13.3
TOP3A-214ENST00000582981 CUTAO60888 179 aa11.88□□□□□ -0.51
TOP3A-214ENST00000582981 SETQ01105 290 aaPredicted RBP11.88□□□□□ -0.51
TOP3A-214ENST00000582981 RBL2Q08999 1139 aa11.88□□□□□ -0.51
TOP3A-214ENST00000582981 SPECC1LQ69YQ0 1117 aa11.88□□□□□ -0.51
TOP3A-214ENST00000582981 MFSD6Q6ZSS7 791 aa11.88□□□□□ -0.51
TOP3A-214ENST00000582981 NLRP10Q86W26 655 aa11.88□□□□□ -0.51
TOP3A-214ENST00000582981 FBXO2Q9UK22 296 aaPredicted RBP11.88□□□□□ -0.51
TOP3A-214ENST00000582981 PCDH11XQ9BZA7 1347 aa11.88□□□□□ -0.51
TOP3A-214ENST00000582981 PCDH11YQ9BZA8 1340 aa11.88□□□□□ -0.51
TOP3A-214ENST00000582981 ADAMTS3O15072 1205 aa11.88□□□□□ -0.51
TOP3A-214ENST00000582981 ARHGAP6O43182 974 aa11.88□□□□□ -0.51
TOP3A-214ENST00000582981 RNF40O75150 1001 aa11.88□□□□□ -0.51
TOP3A-214ENST00000582981 VEGFAP15692 232 aaPredicted RBP11.88□□□□□ -0.51
TOP3A-214ENST00000582981 KCNJ6P48051 423 aa11.88□□□□□ -0.51
TOP3A-214ENST00000582981 EIF5P55010 431 aaKnown RBP11.88□□□□□ -0.51
TOP3A-214ENST00000582981 CTSWP56202 376 aa11.88□□□□□ -0.51
TOP3A-214ENST00000582981 SATB1Q01826 763 aa11.88□□□□□ -0.51
TOP3A-214ENST00000582981 DPYDQ12882 1025 aa11.88□□□□□ -0.51
TOP3A-214ENST00000582981 WTAPQ15007 396 aa11.88□□□□□ -0.51
TOP3A-214ENST00000582981 GBP6Q6ZN66 633 aa11.88□□□□□ -0.51
TOP3A-214ENST00000582981 ZBTB38Q8NAP3 1195 aaPredicted RBP11.88□□□□□ -0.51
TOP3A-214ENST00000582981 VPS16Q9H269 839 aa11.88□□□□□ -0.51
TOP3A-214ENST00000582981 PPP6R2O75170 966 aa11.88□□□□□ -0.51
TOP3A-214ENST00000582981 PDE8BO95263 885 aa11.88□□□□□ -0.51
TOP3A-214ENST00000582981 PLEKHA8P1O95397 391 aa11.88□□□□□ -0.51
TOP3A-214ENST00000582981 PCCAP05165 728 aaPredicted RBP11.88□□□□□ -0.51
TOP3A-214ENST00000582981 ZNF569Q5MCW4 686 aa11.88□□□□□ -0.51
TOP3A-214ENST00000582981 AFAP1L1Q8TED9 768 aa11.88□□□□□ -0.51
TOP3A-214ENST00000582981 SMARCC1Q92922 1105 aaPredicted RBP11.88□□□□□ -0.51
TOP3A-214ENST00000582981 ANKZF1Q9H8Y5 726 aa11.88□□□□□ -0.51
TOP3A-214ENST00000582981 TRIM10Q9UDY6 481 aa11.88□□□□□ -0.51
TOP3A-214ENST00000582981 MMP1P03956 469 aa11.87□□□□□ -0.51
TOP3A-214ENST00000582981 VSNL1P62760 191 aa11.87□□□□□ -0.51
TOP3A-214ENST00000582981 KIF4BQ2VIQ3 1234 aa11.87□□□□□ -0.51
TOP3A-214ENST00000582981 ADGRA1Q86SQ6 560 aa11.87□□□□□ -0.51
TOP3A-214ENST00000582981 IGSF22Q8N9C0 903 aa11.87□□□□□ -0.51
TOP3A-214ENST00000582981 RIN2Q8WYP3 895 aaPredicted RBP11.87□□□□□ -0.51
TOP3A-214ENST00000582981 LRP2BPQ9P2M1 347 aa11.87□□□□□ -0.51
TOP3A-214ENST00000582981 GSG1L2A8MUP6 293 aa11.87□□□□□ -0.51
TOP3A-214ENST00000582981 RNF225M0QZC1 329 aaPredicted RBP11.87□□□□□ -0.51
TOP3A-214ENST00000582981 EXOC5O00471 708 aa11.87□□□□□ -0.51
TOP3A-214ENST00000582981 KIF1CO43896 1103 aaKnown RBP11.87□□□□□ -0.51
TOP3A-214ENST00000582981 NMT2O60551 498 aa11.87□□□□□ -0.51
TOP3A-214ENST00000582981 RPS6KA5O75582 802 aa11.87□□□□□ -0.51
TOP3A-214ENST00000582981 IL2RBP14784 551 aa11.87□□□□□ -0.51
TOP3A-214ENST00000582981 ERCC3P19447 782 aa11.87□□□□□ -0.51
TOP3A-214ENST00000582981 CASP14P31944 242 aa11.87□□□□□ -0.51
TOP3A-214ENST00000582981 USP8P40818 1118 aa11.87□□□□□ -0.51
TOP3A-214ENST00000582981 TRIM22Q8IYM9 498 aa11.87□□□□□ -0.51
TOP3A-214ENST00000582981 SPATA5Q8NB90 893 aa11.87□□□□□ -0.51
TOP3A-214ENST00000582981 FAM71BQ8TC56 605 aa11.87□□□□□ -0.51
TOP3A-214ENST00000582981 SLC4A9Q96Q91 983 aa11.87□□□□□ -0.51
TOP3A-214ENST00000582981 MED4Q9NPJ6 270 aa11.87□□□□□ -0.51
TOP3A-214ENST00000582981 L1RE1Q9UN81 338 aa11.87□□□□□ -0.51
TOP3A-214ENST00000582981 CCDC196A0A1B0GTZ2 297 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms