RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 PABPC4Q13310 644 aaKnown RBP eCLIP15.05■□□□□ -0
SMARCE1-218ENST00000582955 MCMDC2Q4G0Z9 681 aa15.05■□□□□ -0
SMARCE1-218ENST00000582955 TMEM179Q6ZVK1 233 aa15.05■□□□□ -0
SMARCE1-218ENST00000582955 SMCR8Q8TEV9 937 aaPredicted RBP15.05■□□□□ -0
SMARCE1-218ENST00000582955 CCDC17Q96LX7 622 aa15.05■□□□□ -0
SMARCE1-218ENST00000582955 PNMA3Q9UL41 463 aa15.05■□□□□ -0
SMARCE1-218ENST00000582955 TRIM17Q9Y577 477 aa15.05■□□□□ -0
SMARCE1-218ENST00000582955 LOC285556D6RIA3 1793 aa15.05■□□□□ -0
SMARCE1-218ENST00000582955 ECM2O94769 699 aaPredicted RBP15.04■□□□□ -0
SMARCE1-218ENST00000582955 GUCY1A2P33402 732 aa15.04■□□□□ -0
SMARCE1-218ENST00000582955 TTC22Q5TAA0 569 aa15.04■□□□□ -0
SMARCE1-218ENST00000582955 USP17L2Q6R6M4 530 aa15.04■□□□□ -0
SMARCE1-218ENST00000582955 C17orf99Q6UX52 265 aa15.04■□□□□ -0
SMARCE1-218ENST00000582955 ACER1Q8TDN7 264 aa15.04■□□□□ -0
SMARCE1-218ENST00000582955 ABHD8Q96I13 439 aa15.04■□□□□ -0
SMARCE1-218ENST00000582955 MKNK2Q9HBH9 465 aa15.04■□□□□ -0
SMARCE1-218ENST00000582955 DIAPH3Q9NSV4 1193 aa15.04■□□□□ -0
SMARCE1-218ENST00000582955 ROBO3Q96MS0 1386 aa15.03■□□□□ -0
SMARCE1-218ENST00000582955 ADGRA2Q96PE1 1338 aa15.03■□□□□ -0
SMARCE1-218ENST00000582955 HIP1O00291 1037 aa15.03■□□□□ -0
SMARCE1-218ENST00000582955 CENPBP07199 599 aaPredicted RBP15.03■□□□□ -0
SMARCE1-218ENST00000582955 OSBPP22059 807 aa15.03■□□□□ -0
SMARCE1-218ENST00000582955 KIF22Q14807 665 aa15.03■□□□□ -0
SMARCE1-218ENST00000582955 PKN2Q16513 984 aaKnown RBP15.03■□□□□ -0
SMARCE1-218ENST00000582955 IFFO2Q5TF58 517 aa15.03■□□□□ -0
SMARCE1-218ENST00000582955 VPS53Q5VIR6 699 aa15.03■□□□□ -0
SMARCE1-218ENST00000582955 CENPQQ7L2Z9 268 aaPredicted RBP15.03■□□□□ -0
SMARCE1-218ENST00000582955 EFCC1Q9HA90 598 aa15.03■□□□□ -0
SMARCE1-218ENST00000582955 CCDC171Q6TFL3 1326 aa15.02■□□□□ -0
SMARCE1-218ENST00000582955 SLC3A2P08195 630 aaKnown RBP15.02■□□□□ -0
SMARCE1-218ENST00000582955 GSPT1P15170 499 aaKnown RBP15.02■□□□□ -0
SMARCE1-218ENST00000582955 USP14P54578 494 aa15.02■□□□□ -0
SMARCE1-218ENST00000582955 MFAP1P55081 439 aaKnown RBP15.02■□□□□ -0
SMARCE1-218ENST00000582955 IRX3P78415 501 aaPredicted RBP15.02■□□□□ -0
SMARCE1-218ENST00000582955 LACTBP83111 547 aaPredicted RBP15.02■□□□□ -0
SMARCE1-218ENST00000582955 ICA1Q05084 483 aa15.02■□□□□ -0
SMARCE1-218ENST00000582955 PPARAQ07869 468 aa15.02■□□□□ -0
SMARCE1-218ENST00000582955 ARHGEF6Q15052 776 aa15.02■□□□□ -0
SMARCE1-218ENST00000582955 CWC27Q6UX04 472 aaKnown RBP15.02■□□□□ -0
SMARCE1-218ENST00000582955 OTOP1Q7RTM1 612 aa15.02■□□□□ -0
SMARCE1-218ENST00000582955 ZNF589Q86UQ0 364 aaPredicted RBP15.02■□□□□ -0
SMARCE1-218ENST00000582955 CLEC10AQ8IUN9 316 aa15.02■□□□□ -0
SMARCE1-218ENST00000582955 KIAA1683Q9H0B3 1180 aa15.02■□□□□ -0
SMARCE1-218ENST00000582955 ASCC2Q9H1I8 757 aaPredicted RBP15.02■□□□□ -0
SMARCE1-218ENST00000582955 ZNF287Q9HBT7 754 aa15.02■□□□□ -0
SMARCE1-218ENST00000582955 EMILIN3Q9NT22 766 aa15.02■□□□□ -0
SMARCE1-218ENST00000582955 FOXP2O15409 715 aa15.01□□□□□ -0.01
SMARCE1-218ENST00000582955 PRDM1O75626 825 aa15.01□□□□□ -0.01
SMARCE1-218ENST00000582955 RASA1P20936 1047 aa15.01□□□□□ -0.01
SMARCE1-218ENST00000582955 ATP2B2Q01814 1243 aa15.01□□□□□ -0.01
SMARCE1-218ENST00000582955 ZNF444Q8N0Y2 327 aaPredicted RBP15.01□□□□□ -0.01
SMARCE1-218ENST00000582955 CCDC136Q96JN2 1154 aa15.01□□□□□ -0.01
SMARCE1-218ENST00000582955 ARHGEF10LQ9HCE6 1279 aa15.01□□□□□ -0.01
SMARCE1-218ENST00000582955 A0A1W2PRG0 241 aa15□□□□□ -0.01
SMARCE1-218ENST00000582955 BCRP11274 1271 aa15□□□□□ -0.01
SMARCE1-218ENST00000582955 CAP1Q01518 475 aa15□□□□□ -0.01
SMARCE1-218ENST00000582955 PDE4BQ07343 736 aa15□□□□□ -0.01
SMARCE1-218ENST00000582955 FBXO46Q6PJ61 603 aaPredicted RBP15□□□□□ -0.01
SMARCE1-218ENST00000582955 ANKRD13CQ8N6S4 541 aa15□□□□□ -0.01
SMARCE1-218ENST00000582955 C12orf42Q96LP6 360 aa15□□□□□ -0.01
SMARCE1-218ENST00000582955 ARHGAP39Q9C0H5 1083 aa15□□□□□ -0.01
SMARCE1-218ENST00000582955 SH2D4AQ9H788 454 aa15□□□□□ -0.01
SMARCE1-218ENST00000582955 CCDC85CA6NKD9 419 aa14.99□□□□□ -0.01
SMARCE1-218ENST00000582955 HSPD1P10809 573 aaKnown RBP14.99□□□□□ -0.01
SMARCE1-218ENST00000582955 VCAM1P19320 739 aa14.99□□□□□ -0.01
SMARCE1-218ENST00000582955 HOXA7P31268 230 aaPredicted RBP14.99□□□□□ -0.01
SMARCE1-218ENST00000582955 PSMC4P43686 418 aa14.99□□□□□ -0.01
SMARCE1-218ENST00000582955 GCLCP48506 637 aaPredicted RBP14.99□□□□□ -0.01
SMARCE1-218ENST00000582955 CTDSPL2Q05D32 466 aa14.99□□□□□ -0.01
SMARCE1-218ENST00000582955 ALX1Q15699 326 aa14.99□□□□□ -0.01
SMARCE1-218ENST00000582955 KANSL2Q9H9L4 492 aa14.99□□□□□ -0.01
SMARCE1-218ENST00000582955 ZSWIM8A7E2V4 1837 aa14.99□□□□□ -0.01
SMARCE1-218ENST00000582955 USP17L15C9J2P7 530 aa14.98□□□□□ -0.01
SMARCE1-218ENST00000582955 USP17L13C9JLJ4 530 aa14.98□□□□□ -0.01
SMARCE1-218ENST00000582955 USP17L11C9JVI0 530 aa14.98□□□□□ -0.01
SMARCE1-218ENST00000582955 USP17L18D6R9N7 530 aa14.98□□□□□ -0.01
SMARCE1-218ENST00000582955 USP17L22D6RA61 530 aa14.98□□□□□ -0.01
SMARCE1-218ENST00000582955 USP17L17D6RBQ6 530 aa14.98□□□□□ -0.01
SMARCE1-218ENST00000582955 USP17L19D6RCP7 530 aa14.98□□□□□ -0.01
SMARCE1-218ENST00000582955 USP17L20D6RJB6 530 aa14.98□□□□□ -0.01
SMARCE1-218ENST00000582955 FMNL1O95466 1100 aaPredicted RBP14.98□□□□□ -0.01
SMARCE1-218ENST00000582955 FGAP02671 866 aa14.98□□□□□ -0.01
SMARCE1-218ENST00000582955 EEF2P13639 858 aaKnown RBP14.98□□□□□ -0.01
SMARCE1-218ENST00000582955 USP17L24Q0WX57 530 aa14.98□□□□□ -0.01
SMARCE1-218ENST00000582955 P2RX7Q99572 595 aaKnown RBP14.98□□□□□ -0.01
SMARCE1-218ENST00000582955 RPAP3Q9H6T3 665 aaPredicted RBP14.98□□□□□ -0.01
SMARCE1-218ENST00000582955 HPS5Q9UPZ3 1129 aa14.98□□□□□ -0.01
SMARCE1-218ENST00000582955 PTPN22Q9Y2R2 807 aa14.98□□□□□ -0.01
SMARCE1-218ENST00000582955 TMX2Q9Y320 296 aa14.98□□□□□ -0.01
SMARCE1-218ENST00000582955 RAD21O60216 631 aa14.97□□□□□ -0.01
SMARCE1-218ENST00000582955 TSPY3P0CV98 308 aa14.97□□□□□ -0.01
SMARCE1-218ENST00000582955 TSPY8P0CW00 308 aa14.97□□□□□ -0.01
SMARCE1-218ENST00000582955 FCGRTP55899 365 aa14.97□□□□□ -0.01
SMARCE1-218ENST00000582955 HERVK_113P62684 666 aa14.97□□□□□ -0.01
SMARCE1-218ENST00000582955 FAM110CQ1W6H9 321 aa14.97□□□□□ -0.01
SMARCE1-218ENST00000582955 SIAH1Q8IUQ4 282 aa14.97□□□□□ -0.01
SMARCE1-218ENST00000582955 TRIM47Q96LD4 638 aa14.97□□□□□ -0.01
SMARCE1-218ENST00000582955 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.97□□□□□ -0.01
SMARCE1-218ENST00000582955 TOMM22Q9NS69 142 aa14.97□□□□□ -0.01
SMARCE1-218ENST00000582955 ZMYM6O95789 1325 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms