RNA–Protein interactions for RNA: ENST00000582648.5

ERBB2-211, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5

Gene ERBB2, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-211ENST00000582648 PATL2C9JE40 543 aaKnown RBP21.54■■□□□ 1.04
ERBB2-211ENST00000582648 NMIQ13287 307 aaPredicted RBP21.54■■□□□ 1.04
ERBB2-211ENST00000582648 KIF22Q14807 665 aa21.54■■□□□ 1.04
ERBB2-211ENST00000582648 FBXO46Q6PJ61 603 aaPredicted RBP21.54■■□□□ 1.04
ERBB2-211ENST00000582648 EMILIN3Q9NT22 766 aa21.54■■□□□ 1.04
ERBB2-211ENST00000582648 ROBO3Q96MS0 1386 aa21.53■■□□□ 1.04
ERBB2-211ENST00000582648 BCRP11274 1271 aa21.53■■□□□ 1.04
ERBB2-211ENST00000582648 IRX3P78415 501 aaPredicted RBP21.53■■□□□ 1.04
ERBB2-211ENST00000582648 PABPC4Q13310 644 aaKnown RBP eCLIP21.53■■□□□ 1.04
ERBB2-211ENST00000582648 SBK1Q52WX2 424 aa21.53■■□□□ 1.04
ERBB2-211ENST00000582648 USP17L2Q6R6M4 530 aa21.53■■□□□ 1.04
ERBB2-211ENST00000582648 TMEM179Q6ZVK1 233 aa21.53■■□□□ 1.04
ERBB2-211ENST00000582648 NACAP1Q9BZK3 213 aa21.53■■□□□ 1.04
ERBB2-211ENST00000582648 NAPBQ9H115 298 aa21.53■■□□□ 1.04
ERBB2-211ENST00000582648 ASCC2Q9H1I8 757 aaPredicted RBP21.53■■□□□ 1.04
ERBB2-211ENST00000582648 OSBPP22059 807 aa21.52■■□□□ 1.04
ERBB2-211ENST00000582648 CTGFP29279 349 aa21.52■■□□□ 1.04
ERBB2-211ENST00000582648 VPS53Q5VIR6 699 aa21.52■■□□□ 1.04
ERBB2-211ENST00000582648 ANKRD13CQ8N6S4 541 aa21.52■■□□□ 1.04
ERBB2-211ENST00000582648 HELLSQ9NRZ9 838 aa21.52■■□□□ 1.04
ERBB2-211ENST00000582648 GREB1LQ9C091 1923 aaPredicted RBP21.51■■□□□ 1.03
ERBB2-211ENST00000582648 FOXP2O15409 715 aa21.51■■□□□ 1.03
ERBB2-211ENST00000582648 ICA1Q05084 483 aa21.51■■□□□ 1.03
ERBB2-211ENST00000582648 TAOK2Q9UL54 1235 aa21.51■■□□□ 1.03
ERBB2-211ENST00000582648 PRDM1O75626 825 aa21.5■■□□□ 1.03
ERBB2-211ENST00000582648 PSMC4P43686 418 aa21.5■■□□□ 1.03
ERBB2-211ENST00000582648 ATP2B2Q01814 1243 aa21.5■■□□□ 1.03
ERBB2-211ENST00000582648 ZNF589Q86UQ0 364 aaPredicted RBP21.5■■□□□ 1.03
ERBB2-211ENST00000582648 TRIM47Q96LD4 638 aa21.5■■□□□ 1.03
ERBB2-211ENST00000582648 CCDC17Q96LX7 622 aa21.5■■□□□ 1.03
ERBB2-211ENST00000582648 KIAA1683Q9H0B3 1180 aa21.5■■□□□ 1.03
ERBB2-211ENST00000582648 MKNK2Q9HBH9 465 aa21.5■■□□□ 1.03
ERBB2-211ENST00000582648 PTPN22Q9Y2R2 807 aa21.5■■□□□ 1.03
ERBB2-211ENST00000582648 A0A1W2PRG0 241 aa21.49■■□□□ 1.03
ERBB2-211ENST00000582648 FMNL1O95466 1100 aaPredicted RBP21.49■■□□□ 1.03
ERBB2-211ENST00000582648 VCAM1P19320 739 aa21.49■■□□□ 1.03
ERBB2-211ENST00000582648 SDSP20132 328 aa21.49■■□□□ 1.03
ERBB2-211ENST00000582648 USP14P54578 494 aa21.49■■□□□ 1.03
ERBB2-211ENST00000582648 ARHGEF6Q15052 776 aa21.49■■□□□ 1.03
ERBB2-211ENST00000582648 MCMDC2Q4G0Z9 681 aa21.49■■□□□ 1.03
ERBB2-211ENST00000582648 C12orf42Q96LP6 360 aa21.49■■□□□ 1.03
ERBB2-211ENST00000582648 PTCH2Q9Y6C5 1203 aa21.49■■□□□ 1.03
ERBB2-211ENST00000582648 PEX10O60683 326 aa21.48■■□□□ 1.03
ERBB2-211ENST00000582648 GSPT1P15170 499 aaKnown RBP21.48■■□□□ 1.03
ERBB2-211ENST00000582648 RASA1P20936 1047 aa21.48■■□□□ 1.03
ERBB2-211ENST00000582648 PPARAQ07869 468 aa21.48■■□□□ 1.03
ERBB2-211ENST00000582648 ARHGEF10LQ9HCE6 1279 aa21.48■■□□□ 1.03
ERBB2-211ENST00000582648 DIAPH3Q9NSV4 1193 aa21.48■■□□□ 1.03
ERBB2-211ENST00000582648 CCDC171Q6TFL3 1326 aa21.48■■□□□ 1.03
ERBB2-211ENST00000582648 HTTP42858 3142 aa21.47■■□□□ 1.03
ERBB2-211ENST00000582648 HOXA7P31268 230 aaPredicted RBP21.47■■□□□ 1.03
ERBB2-211ENST00000582648 TTC22Q5TAA0 569 aa21.47■■□□□ 1.03
ERBB2-211ENST00000582648 P2RX7Q99572 595 aaKnown RBP21.47■■□□□ 1.03
ERBB2-211ENST00000582648 GCLCP48506 637 aaPredicted RBP21.46■■□□□ 1.03
ERBB2-211ENST00000582648 FCGRTP55899 365 aa21.46■■□□□ 1.03
ERBB2-211ENST00000582648 SOX10P56693 466 aa21.46■■□□□ 1.03
ERBB2-211ENST00000582648 HERVK_113P62684 666 aa21.46■■□□□ 1.03
ERBB2-211ENST00000582648 CTDSPL2Q05D32 466 aa21.46■■□□□ 1.03
ERBB2-211ENST00000582648 FAM110CQ1W6H9 321 aa21.46■■□□□ 1.03
ERBB2-211ENST00000582648 CWC27Q6UX04 472 aaKnown RBP21.46■■□□□ 1.03
ERBB2-211ENST00000582648 RPAP3Q9H6T3 665 aaPredicted RBP21.46■■□□□ 1.03
ERBB2-211ENST00000582648 MYH4Q9Y623 1939 aa21.45■■□□□ 1.02
ERBB2-211ENST00000582648 EEF2P13639 858 aaKnown RBP21.45■■□□□ 1.02
ERBB2-211ENST00000582648 KIAA1755Q5JYT7 1200 aa21.45■■□□□ 1.02
ERBB2-211ENST00000582648 SIAH1Q8IUQ4 282 aa21.45■■□□□ 1.02
ERBB2-211ENST00000582648 SPICE1Q8N0Z3 855 aa21.45■■□□□ 1.02
ERBB2-211ENST00000582648 PAGR1Q9BTK6 254 aa21.45■■□□□ 1.02
ERBB2-211ENST00000582648 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.45■■□□□ 1.02
ERBB2-211ENST00000582648 MYPNQ86TC9 1320 aa21.45■■□□□ 1.02
ERBB2-211ENST00000582648 USP17L15C9J2P7 530 aa21.44■■□□□ 1.02
ERBB2-211ENST00000582648 USP17L13C9JLJ4 530 aa21.44■■□□□ 1.02
ERBB2-211ENST00000582648 USP17L11C9JVI0 530 aa21.44■■□□□ 1.02
ERBB2-211ENST00000582648 USP17L18D6R9N7 530 aa21.44■■□□□ 1.02
ERBB2-211ENST00000582648 USP17L22D6RA61 530 aa21.44■■□□□ 1.02
ERBB2-211ENST00000582648 USP17L17D6RBQ6 530 aa21.44■■□□□ 1.02
ERBB2-211ENST00000582648 USP17L19D6RCP7 530 aa21.44■■□□□ 1.02
ERBB2-211ENST00000582648 USP17L20D6RJB6 530 aa21.44■■□□□ 1.02
ERBB2-211ENST00000582648 TNPO2O14787 897 aaKnown RBP21.44■■□□□ 1.02
ERBB2-211ENST00000582648 RAD21O60216 631 aa21.44■■□□□ 1.02
ERBB2-211ENST00000582648 SLC3A2P08195 630 aaKnown RBP21.44■■□□□ 1.02
ERBB2-211ENST00000582648 HSPD1P10809 573 aaKnown RBP21.44■■□□□ 1.02
ERBB2-211ENST00000582648 USP17L24Q0WX57 530 aa21.44■■□□□ 1.02
ERBB2-211ENST00000582648 TICAM2Q86XR7 235 aa21.44■■□□□ 1.02
ERBB2-211ENST00000582648 TANGO6Q9C0B7 1094 aa21.44■■□□□ 1.02
ERBB2-211ENST00000582648 SH2D4AQ9H788 454 aa21.44■■□□□ 1.02
ERBB2-211ENST00000582648 KANSL2Q9H9L4 492 aa21.44■■□□□ 1.02
ERBB2-211ENST00000582648 ZNF287Q9HBT7 754 aa21.44■■□□□ 1.02
ERBB2-211ENST00000582648 TXNRD2Q9NNW7 524 aa21.44■■□□□ 1.02
ERBB2-211ENST00000582648 SRRDQ9UH36 339 aa21.44■■□□□ 1.02
ERBB2-211ENST00000582648 DOCK3Q8IZD9 2030 aa21.43■■□□□ 1.02
ERBB2-211ENST00000582648 PRKCZQ05513 592 aa21.43■■□□□ 1.02
ERBB2-211ENST00000582648 PDE4BQ07343 736 aa21.43■■□□□ 1.02
ERBB2-211ENST00000582648 ZNF444Q8N0Y2 327 aaPredicted RBP21.43■■□□□ 1.02
ERBB2-211ENST00000582648 TMX2Q9Y320 296 aa21.43■■□□□ 1.02
ERBB2-211ENST00000582648 HIP1O00291 1037 aa21.42■■□□□ 1.02
ERBB2-211ENST00000582648 GNRH1P01148 92 aa21.42■■□□□ 1.02
ERBB2-211ENST00000582648 LAMA4Q16363 1823 aa21.42■■□□□ 1.02
ERBB2-211ENST00000582648 SLC9C1Q4G0N8 1177 aa21.42■■□□□ 1.02
ERBB2-211ENST00000582648 FAM47AQ5JRC9 791 aa21.42■■□□□ 1.02
ERBB2-211ENST00000582648 CATSPERGQ6ZRH7 1159 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms