RNA–Protein interactions for RNA: ENST00000582370.1

PDLIM1P3-201, Transcript of PDZ and LIM domain 1 pseudogene 3, humanhuman

BASIC

Gene PDLIM1P3, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P3-201ENST00000582370 SPP2Q13103 211 aa10.55□□□□□ -0.72
PDLIM1P3-201ENST00000582370 LRRC24Q50LG9 513 aa10.55□□□□□ -0.72
PDLIM1P3-201ENST00000582370 AACSQ86V21 672 aa10.55□□□□□ -0.72
PDLIM1P3-201ENST00000582370 GPRC5AQ8NFJ5 357 aa10.55□□□□□ -0.72
PDLIM1P3-201ENST00000582370 KLHDC4Q8TBB5 520 aa10.55□□□□□ -0.72
PDLIM1P3-201ENST00000582370 LPAR1Q92633 364 aa10.55□□□□□ -0.72
PDLIM1P3-201ENST00000582370 ASB2Q96Q27 587 aa10.55□□□□□ -0.72
PDLIM1P3-201ENST00000582370 LNPKQ9C0E8 428 aa10.55□□□□□ -0.72
PDLIM1P3-201ENST00000582370 OSBPL5Q9H0X9 879 aaPredicted RBP10.55□□□□□ -0.72
PDLIM1P3-201ENST00000582370 DDX20Q9UHI6 824 aaKnown RBP10.55□□□□□ -0.72
PDLIM1P3-201ENST00000582370 ATP11BQ9Y2G3 1177 aa10.55□□□□□ -0.72
PDLIM1P3-201ENST00000582370 HCN4Q9Y3Q4 1203 aa10.55□□□□□ -0.72
PDLIM1P3-201ENST00000582370 ZNF236Q9UL36 1845 aa10.55□□□□□ -0.72
PDLIM1P3-201ENST00000582370 TCF20Q9UGU0 1960 aaKnown RBP10.55□□□□□ -0.72
PDLIM1P3-201ENST00000582370 GAKO14976 1311 aa10.55□□□□□ -0.72
PDLIM1P3-201ENST00000582370 PDS5AQ29RF7 1337 aaKnown RBP10.55□□□□□ -0.72
PDLIM1P3-201ENST00000582370 PIEZO1Q92508 2521 aa10.54□□□□□ -0.72
PDLIM1P3-201ENST00000582370 SIPA1L1O43166 1804 aa10.54□□□□□ -0.72
PDLIM1P3-201ENST00000582370 XIRP2A4UGR9 3374 aa10.54□□□□□ -0.72
PDLIM1P3-201ENST00000582370 DDTLA6NHG4 134 aaPredicted RBP10.54□□□□□ -0.72
PDLIM1P3-201ENST00000582370 FGFR2P21802 821 aa10.54□□□□□ -0.72
PDLIM1P3-201ENST00000582370 GRIN2CQ14957 1233 aa10.54□□□□□ -0.72
PDLIM1P3-201ENST00000582370 CCL14Q16627 93 aa10.54□□□□□ -0.72
PDLIM1P3-201ENST00000582370 CCAR1Q8IX12 1150 aaKnown RBP10.54□□□□□ -0.72
PDLIM1P3-201ENST00000582370 GTF3C2Q8WUA4 911 aaPredicted RBP10.54□□□□□ -0.72
PDLIM1P3-201ENST00000582370 BADQ92934 168 aa10.54□□□□□ -0.72
PDLIM1P3-201ENST00000582370 RNPC3Q96LT9 517 aaKnown RBP10.54□□□□□ -0.72
PDLIM1P3-201ENST00000582370 AS3MTQ9HBK9 375 aa10.54□□□□□ -0.72
PDLIM1P3-201ENST00000582370 PRDM5Q9NQX1 630 aaPredicted RBP10.54□□□□□ -0.72
PDLIM1P3-201ENST00000582370 GBF1Q92538 1859 aa10.53□□□□□ -0.72
PDLIM1P3-201ENST00000582370 APBB1O00213 710 aa10.53□□□□□ -0.72
PDLIM1P3-201ENST00000582370 ATP5JP18859 108 aa10.53□□□□□ -0.72
PDLIM1P3-201ENST00000582370 DNAJB2P25686 324 aa10.53□□□□□ -0.72
PDLIM1P3-201ENST00000582370 HOXA7P31268 230 aaPredicted RBP10.53□□□□□ -0.72
PDLIM1P3-201ENST00000582370 HERVK_113P62684 666 aa10.53□□□□□ -0.72
PDLIM1P3-201ENST00000582370 MRPS5P82675 430 aaKnown RBP10.53□□□□□ -0.72
PDLIM1P3-201ENST00000582370 SNX17Q15036 470 aa10.53□□□□□ -0.72
PDLIM1P3-201ENST00000582370 TTF1Q15361 905 aaPredicted RBP10.53□□□□□ -0.72
PDLIM1P3-201ENST00000582370 MORN1Q5T089 497 aa10.53□□□□□ -0.72
PDLIM1P3-201ENST00000582370 AKNAD1Q5T1N1 836 aa10.53□□□□□ -0.72
PDLIM1P3-201ENST00000582370 MFSD14CQ5VZR4 134 aa10.53□□□□□ -0.72
PDLIM1P3-201ENST00000582370 GPR142Q7Z601 462 aa10.53□□□□□ -0.72
PDLIM1P3-201ENST00000582370 PLEKHH3Q7Z736 793 aa10.53□□□□□ -0.72
PDLIM1P3-201ENST00000582370 ZGPATQ8N5A5 531 aaKnown RBP10.53□□□□□ -0.72
PDLIM1P3-201ENST00000582370 IL27Q8NEV9 243 aa10.53□□□□□ -0.72
PDLIM1P3-201ENST00000582370 EAF2Q96CJ1 260 aaPredicted RBP10.53□□□□□ -0.72
PDLIM1P3-201ENST00000582370 NEUROD6Q96NK8 337 aa10.53□□□□□ -0.72
PDLIM1P3-201ENST00000582370 GAS2L1Q99501 681 aaPredicted RBP10.53□□□□□ -0.72
PDLIM1P3-201ENST00000582370 TXNRD2Q9NNW7 524 aa10.53□□□□□ -0.72
PDLIM1P3-201ENST00000582370 IL1RAPL2Q9NP60 686 aa10.53□□□□□ -0.72
PDLIM1P3-201ENST00000582370 PDLIM7Q9NR12 457 aa10.53□□□□□ -0.72
PDLIM1P3-201ENST00000582370 FOCADQ5VW36 1801 aa10.53□□□□□ -0.72
PDLIM1P3-201ENST00000582370 CDK5RAP2Q96SN8 1893 aa10.53□□□□□ -0.72
PDLIM1P3-201ENST00000582370 USP17L5A8MUK1 530 aa10.52□□□□□ -0.73
PDLIM1P3-201ENST00000582370 HIP1O00291 1037 aa10.52□□□□□ -0.73
PDLIM1P3-201ENST00000582370 SLURP2P0DP57 97 aa10.52□□□□□ -0.73
PDLIM1P3-201ENST00000582370 PDE1AP54750 535 aa10.52□□□□□ -0.73
PDLIM1P3-201ENST00000582370 ERVK-9P63128 1117 aa10.52□□□□□ -0.73
PDLIM1P3-201ENST00000582370 ERVK-24P63145 666 aa10.52□□□□□ -0.73
PDLIM1P3-201ENST00000582370 MAP2K5Q13163 448 aa10.52□□□□□ -0.73
PDLIM1P3-201ENST00000582370 PICALMQ13492 652 aa10.52□□□□□ -0.73
PDLIM1P3-201ENST00000582370 BMP2KLQ5H9B9 411 aa10.52□□□□□ -0.73
PDLIM1P3-201ENST00000582370 CASC1Q6TDU7 716 aa10.52□□□□□ -0.73
PDLIM1P3-201ENST00000582370 SLC39A5Q6ZMH5 540 aa10.52□□□□□ -0.73
PDLIM1P3-201ENST00000582370 XAGE2Q96GT9 111 aa10.52□□□□□ -0.73
PDLIM1P3-201ENST00000582370 ZNF576Q9H609 170 aa10.52□□□□□ -0.73
PDLIM1P3-201ENST00000582370 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.52□□□□□ -0.73
PDLIM1P3-201ENST00000582370 DENND2AQ9ULE3 1009 aa10.52□□□□□ -0.73
PDLIM1P3-201ENST00000582370 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.51□□□□□ -0.73
PDLIM1P3-201ENST00000582370 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.51□□□□□ -0.73
PDLIM1P3-201ENST00000582370 KBTBD13C9JR72 458 aa10.51□□□□□ -0.73
PDLIM1P3-201ENST00000582370 NPM3O75607 178 aaKnown RBP10.51□□□□□ -0.73
PDLIM1P3-201ENST00000582370 ARID4AP29374 1257 aaPredicted RBP10.51□□□□□ -0.73
PDLIM1P3-201ENST00000582370 CAP2P40123 477 aa10.51□□□□□ -0.73
PDLIM1P3-201ENST00000582370 TRIM60Q495X7 471 aa10.51□□□□□ -0.73
PDLIM1P3-201ENST00000582370 TTC39AQ5SRH9 613 aa10.51□□□□□ -0.73
PDLIM1P3-201ENST00000582370 C1orf53Q5VUE5 145 aa10.51□□□□□ -0.73
PDLIM1P3-201ENST00000582370 ZSCAN25Q6NSZ9 544 aa10.51□□□□□ -0.73
PDLIM1P3-201ENST00000582370 PLEKHM2Q8IWE5 1019 aa10.51□□□□□ -0.73
PDLIM1P3-201ENST00000582370 SLF2Q8IX21 1173 aa10.51□□□□□ -0.73
PDLIM1P3-201ENST00000582370 ARRDC4Q8NCT1 418 aa10.51□□□□□ -0.73
PDLIM1P3-201ENST00000582370 EDC3Q96F86 508 aaKnown RBP10.51□□□□□ -0.73
PDLIM1P3-201ENST00000582370 P2RX7Q99572 595 aaKnown RBP10.51□□□□□ -0.73
PDLIM1P3-201ENST00000582370 PORCNQ9H237 461 aa10.51□□□□□ -0.73
PDLIM1P3-201ENST00000582370 CWC22Q9HCG8 908 aaKnown RBP10.51□□□□□ -0.73
PDLIM1P3-201ENST00000582370 DDX4Q9NQI0 724 aaKnown RBP10.51□□□□□ -0.73
PDLIM1P3-201ENST00000582370 TMOD4Q9NZQ9 345 aa10.51□□□□□ -0.73
PDLIM1P3-201ENST00000582370 DBNLQ9UJU6 430 aaKnown RBP10.51□□□□□ -0.73
PDLIM1P3-201ENST00000582370 SALL3Q9BXA9 1300 aa10.51□□□□□ -0.73
PDLIM1P3-201ENST00000582370 CNGA1P29973 690 aa10.5□□□□□ -0.73
PDLIM1P3-201ENST00000582370 BACE1P56817 501 aa10.5□□□□□ -0.73
PDLIM1P3-201ENST00000582370 TIMM10P62072 90 aa10.5□□□□□ -0.73
PDLIM1P3-201ENST00000582370 MTMR2Q13614 643 aa10.5□□□□□ -0.73
PDLIM1P3-201ENST00000582370 CCDC102BQ68D86 513 aa10.5□□□□□ -0.73
PDLIM1P3-201ENST00000582370 TIFAQ96CG3 184 aa10.5□□□□□ -0.73
PDLIM1P3-201ENST00000582370 EVI5LQ96CN4 794 aa10.5□□□□□ -0.73
PDLIM1P3-201ENST00000582370 FAM163AQ96GL9 167 aaPredicted RBP10.5□□□□□ -0.73
PDLIM1P3-201ENST00000582370 WDR18Q9BV38 432 aa10.5□□□□□ -0.73
PDLIM1P3-201ENST00000582370 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.5□□□□□ -0.73
PDLIM1P3-201ENST00000582370 RBPJLQ9UBG7 517 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms