RNA–Protein interactions for RNA: ENST00000581835.1

PPP4R1-220, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 379 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-220ENST00000581835 SMCR8Q8TEV9 937 aaPredicted RBP12.3□□□□□ -0.44
PPP4R1-220ENST00000581835 ASCC2Q9H1I8 757 aaPredicted RBP12.3□□□□□ -0.44
PPP4R1-220ENST00000581835 BRCA2P51587 3418 aa12.29□□□□□ -0.44
PPP4R1-220ENST00000581835 ECM2O94769 699 aaPredicted RBP12.29□□□□□ -0.44
PPP4R1-220ENST00000581835 GNRH1P01148 92 aa12.29□□□□□ -0.44
PPP4R1-220ENST00000581835 AKR1B1P15121 316 aa12.29□□□□□ -0.44
PPP4R1-220ENST00000581835 OSBPP22059 807 aa12.29□□□□□ -0.44
PPP4R1-220ENST00000581835 PSMC4P43686 418 aa12.29□□□□□ -0.44
PPP4R1-220ENST00000581835 ZYXQ15942 572 aaKnown RBP12.29□□□□□ -0.44
PPP4R1-220ENST00000581835 TMEM179Q6ZVK1 233 aa12.29□□□□□ -0.44
PPP4R1-220ENST00000581835 IFNL3Q8IZI9 196 aa12.29□□□□□ -0.44
PPP4R1-220ENST00000581835 ANKRD13CQ8N6S4 541 aa12.29□□□□□ -0.44
PPP4R1-220ENST00000581835 TRIM47Q96LD4 638 aa12.29□□□□□ -0.44
PPP4R1-220ENST00000581835 C12orf42Q96LP6 360 aa12.29□□□□□ -0.44
PPP4R1-220ENST00000581835 CCDC17Q96LX7 622 aa12.29□□□□□ -0.44
PPP4R1-220ENST00000581835 FEZ1Q99689 392 aa12.29□□□□□ -0.44
PPP4R1-220ENST00000581835 KIAA1683Q9H0B3 1180 aa12.29□□□□□ -0.44
PPP4R1-220ENST00000581835 A0A1W2PRG0 241 aa12.28□□□□□ -0.44
PPP4R1-220ENST00000581835 MINDY4BA8MYZ0 360 aa12.28□□□□□ -0.44
PPP4R1-220ENST00000581835 FMNL1O95466 1100 aaPredicted RBP12.28□□□□□ -0.44
PPP4R1-220ENST00000581835 APPP05067 770 aa12.28□□□□□ -0.44
PPP4R1-220ENST00000581835 GCLCP48506 637 aaPredicted RBP12.28□□□□□ -0.44
PPP4R1-220ENST00000581835 TDO2P48775 406 aa12.28□□□□□ -0.44
PPP4R1-220ENST00000581835 USP14P54578 494 aa12.28□□□□□ -0.44
PPP4R1-220ENST00000581835 IRX3P78415 501 aaPredicted RBP12.28□□□□□ -0.44
PPP4R1-220ENST00000581835 FAM110CQ1W6H9 321 aa12.28□□□□□ -0.44
PPP4R1-220ENST00000581835 CCDC129Q6ZRS4 1044 aa12.28□□□□□ -0.44
PPP4R1-220ENST00000581835 TICAM2Q86XR7 235 aa12.28□□□□□ -0.44
PPP4R1-220ENST00000581835 P2RX7Q99572 595 aaKnown RBP12.28□□□□□ -0.44
PPP4R1-220ENST00000581835 PTCH2Q9Y6C5 1203 aa12.28□□□□□ -0.44
PPP4R1-220ENST00000581835 GREB1LQ9C091 1923 aaPredicted RBP12.28□□□□□ -0.44
PPP4R1-220ENST00000581835 TRIM6-TRIM34B2RNG4 842 aa12.27□□□□□ -0.45
PPP4R1-220ENST00000581835 RGS19P49795 217 aa12.27□□□□□ -0.45
PPP4R1-220ENST00000581835 PRMT2P55345 433 aa12.27□□□□□ -0.45
PPP4R1-220ENST00000581835 FCGRTP55899 365 aa12.27□□□□□ -0.45
PPP4R1-220ENST00000581835 SIAH1Q8IUQ4 282 aa12.27□□□□□ -0.45
PPP4R1-220ENST00000581835 STK11IPQ8N1F8 1099 aa12.27□□□□□ -0.45
PPP4R1-220ENST00000581835 RILPL2Q969X0 211 aa12.27□□□□□ -0.45
PPP4R1-220ENST00000581835 NACAP1Q9BZK3 213 aa12.27□□□□□ -0.45
PPP4R1-220ENST00000581835 HELLSQ9NRZ9 838 aa12.27□□□□□ -0.45
PPP4R1-220ENST00000581835 SRRDQ9UH36 339 aa12.27□□□□□ -0.45
PPP4R1-220ENST00000581835 ROBO3Q96MS0 1386 aa12.27□□□□□ -0.45
PPP4R1-220ENST00000581835 USP17L15C9J2P7 530 aa12.26□□□□□ -0.45
PPP4R1-220ENST00000581835 USP17L13C9JLJ4 530 aa12.26□□□□□ -0.45
PPP4R1-220ENST00000581835 USP17L11C9JVI0 530 aa12.26□□□□□ -0.45
PPP4R1-220ENST00000581835 USP17L18D6R9N7 530 aa12.26□□□□□ -0.45
PPP4R1-220ENST00000581835 USP17L22D6RA61 530 aa12.26□□□□□ -0.45
PPP4R1-220ENST00000581835 USP17L17D6RBQ6 530 aa12.26□□□□□ -0.45
PPP4R1-220ENST00000581835 USP17L19D6RCP7 530 aa12.26□□□□□ -0.45
PPP4R1-220ENST00000581835 USP17L20D6RJB6 530 aa12.26□□□□□ -0.45
PPP4R1-220ENST00000581835 FOXP2O15409 715 aa12.26□□□□□ -0.45
PPP4R1-220ENST00000581835 VCAM1P19320 739 aa12.26□□□□□ -0.45
PPP4R1-220ENST00000581835 RASA1P20936 1047 aa12.26□□□□□ -0.45
PPP4R1-220ENST00000581835 PDE4AP27815 886 aa12.26□□□□□ -0.45
PPP4R1-220ENST00000581835 HOXD10P28358 340 aa12.26□□□□□ -0.45
PPP4R1-220ENST00000581835 HERVK_113P62684 666 aa12.26□□□□□ -0.45
PPP4R1-220ENST00000581835 USP17L24Q0WX57 530 aa12.26□□□□□ -0.45
PPP4R1-220ENST00000581835 MCMDC2Q4G0Z9 681 aa12.26□□□□□ -0.45
PPP4R1-220ENST00000581835 CATSPERGQ6ZRH7 1159 aa12.26□□□□□ -0.45
PPP4R1-220ENST00000581835 CLEC10AQ8IUN9 316 aa12.26□□□□□ -0.45
PPP4R1-220ENST00000581835 ARMC5Q96C12 935 aa12.26□□□□□ -0.45
PPP4R1-220ENST00000581835 FAM227BQ96M60 508 aa12.26□□□□□ -0.45
PPP4R1-220ENST00000581835 MKNK2Q9HBH9 465 aa12.26□□□□□ -0.45
PPP4R1-220ENST00000581835 PDE4DIPQ5VU43 2346 aa12.26□□□□□ -0.45
PPP4R1-220ENST00000581835 RLFQ13129 1914 aa12.25□□□□□ -0.45
PPP4R1-220ENST00000581835 MYH4Q9Y623 1939 aa12.25□□□□□ -0.45
PPP4R1-220ENST00000581835 A0A0D9SFI3 127 aa12.25□□□□□ -0.45
PPP4R1-220ENST00000581835 SOX10P56693 466 aa12.25□□□□□ -0.45
PPP4R1-220ENST00000581835 ICA1Q05084 483 aa12.25□□□□□ -0.45
PPP4R1-220ENST00000581835 NMIQ13287 307 aaPredicted RBP12.25□□□□□ -0.45
PPP4R1-220ENST00000581835 VPS53Q5VIR6 699 aa12.25□□□□□ -0.45
PPP4R1-220ENST00000581835 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.25□□□□□ -0.45
PPP4R1-220ENST00000581835 NAPBQ9H115 298 aa12.25□□□□□ -0.45
PPP4R1-220ENST00000581835 ARHGEF10LQ9HCE6 1279 aa12.25□□□□□ -0.45
PPP4R1-220ENST00000581835 RBPJLQ9UBG7 517 aa12.25□□□□□ -0.45
PPP4R1-220ENST00000581835 MORF4L1Q9UBU8 362 aa12.25□□□□□ -0.45
PPP4R1-220ENST00000581835 TMX2Q9Y320 296 aa12.25□□□□□ -0.45
PPP4R1-220ENST00000581835 MYPNQ86TC9 1320 aa12.25□□□□□ -0.45
PPP4R1-220ENST00000581835 TNPO2O14787 897 aaKnown RBP12.24□□□□□ -0.45
PPP4R1-220ENST00000581835 PEX10O60683 326 aa12.24□□□□□ -0.45
PPP4R1-220ENST00000581835 EEF2P13639 858 aaKnown RBP12.24□□□□□ -0.45
PPP4R1-220ENST00000581835 SDSP20132 328 aa12.24□□□□□ -0.45
PPP4R1-220ENST00000581835 PRKCZQ05513 592 aa12.24□□□□□ -0.45
PPP4R1-220ENST00000581835 PPARAQ07869 468 aa12.24□□□□□ -0.45
PPP4R1-220ENST00000581835 PARP14Q460N5 1801 aa12.24□□□□□ -0.45
PPP4R1-220ENST00000581835 SLC9C1Q4G0N8 1177 aa12.24□□□□□ -0.45
PPP4R1-220ENST00000581835 KIAA1755Q5JYT7 1200 aa12.24□□□□□ -0.45
PPP4R1-220ENST00000581835 POTEEQ6S8J3 1075 aa12.24□□□□□ -0.45
PPP4R1-220ENST00000581835 ZNF589Q86UQ0 364 aaPredicted RBP12.24□□□□□ -0.45
PPP4R1-220ENST00000581835 GTF3C2Q8WUA4 911 aaPredicted RBP12.24□□□□□ -0.45
PPP4R1-220ENST00000581835 ZNF333Q96JL9 665 aa12.24□□□□□ -0.45
PPP4R1-220ENST00000581835 RPAP3Q9H6T3 665 aaPredicted RBP12.24□□□□□ -0.45
PPP4R1-220ENST00000581835 KANSL2Q9H9L4 492 aa12.24□□□□□ -0.45
PPP4R1-220ENST00000581835 ZNF287Q9HBT7 754 aa12.24□□□□□ -0.45
PPP4R1-220ENST00000581835 TXNRD2Q9NNW7 524 aa12.24□□□□□ -0.45
PPP4R1-220ENST00000581835 GABRQQ9UN88 632 aa12.24□□□□□ -0.45
PPP4R1-220ENST00000581835 PLXNB2O15031 1838 aa12.23□□□□□ -0.45
PPP4R1-220ENST00000581835 PRDM1O75626 825 aa12.23□□□□□ -0.45
PPP4R1-220ENST00000581835 HSPD1P10809 573 aaKnown RBP12.23□□□□□ -0.45
PPP4R1-220ENST00000581835 ALX1Q15699 326 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms