RNA–Protein interactions for RNA: ENST00000581790.5

NF1-221, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 1,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-221ENST00000581790 PALD1Q9ULE6 856 aa7.78□□□□□ -1.16
NF1-221ENST00000581790 TBC1D2BQ9UPU7 963 aa7.78□□□□□ -1.16
NF1-221ENST00000581790 ZNF652Q9Y2D9 606 aa7.78□□□□□ -1.16
NF1-221ENST00000581790 UBR3Q6ZT12 1888 aa7.78□□□□□ -1.16
NF1-221ENST00000581790 SH3TC1Q8TE82 1336 aa7.78□□□□□ -1.16
NF1-221ENST00000581790 ABCC12Q96J65 1359 aa7.77□□□□□ -1.17
NF1-221ENST00000581790 MED23Q9ULK4 1368 aa7.77□□□□□ -1.17
NF1-221ENST00000581790 A0A1B0GUL7 405 aa7.77□□□□□ -1.17
NF1-221ENST00000581790 IFIT1P09914 478 aaKnown RBP7.77□□□□□ -1.17
NF1-221ENST00000581790 ZKSCAN1P17029 563 aaPredicted RBP7.77□□□□□ -1.17
NF1-221ENST00000581790 MCM4P33991 863 aa7.77□□□□□ -1.17
NF1-221ENST00000581790 DEKP35659 375 aaKnown RBP7.77□□□□□ -1.17
NF1-221ENST00000581790 ITPK1Q13572 414 aa7.77□□□□□ -1.17
NF1-221ENST00000581790 TTC39AQ5SRH9 613 aa7.77□□□□□ -1.17
NF1-221ENST00000581790 GORABQ5T7V8 394 aa7.77□□□□□ -1.17
NF1-221ENST00000581790 INTS5Q6P9B9 1019 aaKnown RBP7.77□□□□□ -1.17
NF1-221ENST00000581790 TTLL11Q8NHH1 800 aa7.77□□□□□ -1.17
NF1-221ENST00000581790 XAGE2Q96GT9 111 aa7.77□□□□□ -1.17
NF1-221ENST00000581790 DNAJC2Q99543 621 aaKnown RBP7.77□□□□□ -1.17
NF1-221ENST00000581790 CNNM1Q9NRU3 951 aa7.77□□□□□ -1.17
NF1-221ENST00000581790 HCN2Q9UL51 889 aa7.77□□□□□ -1.17
NF1-221ENST00000581790 PCDHGC4Q9Y5F7 938 aa7.77□□□□□ -1.17
NF1-221ENST00000581790 SNX14Q9Y5W7 946 aa7.77□□□□□ -1.17
NF1-221ENST00000581790 RIC1Q4ADV7 1423 aa7.77□□□□□ -1.17
NF1-221ENST00000581790 UBN2Q6ZU65 1347 aa7.77□□□□□ -1.17
NF1-221ENST00000581790 A0A0D9SFI3 127 aa7.76□□□□□ -1.17
NF1-221ENST00000581790 GOLGA6L22H0YM25 854 aa7.76□□□□□ -1.17
NF1-221ENST00000581790 APBA3O96018 575 aa7.76□□□□□ -1.17
NF1-221ENST00000581790 PSMA5P28066 241 aa7.76□□□□□ -1.17
NF1-221ENST00000581790 PRRT3Q5FWE3 981 aa7.76□□□□□ -1.17
NF1-221ENST00000581790 METTL24Q5JXM2 366 aa7.76□□□□□ -1.17
NF1-221ENST00000581790 FAM182BQ5T319 152 aa7.76□□□□□ -1.17
NF1-221ENST00000581790 LDHAL6AQ6ZMR3 332 aa7.76□□□□□ -1.17
NF1-221ENST00000581790 KBTBD3Q8NAB2 608 aa7.76□□□□□ -1.17
NF1-221ENST00000581790 RHBDD1Q8TEB9 315 aa7.76□□□□□ -1.17
NF1-221ENST00000581790 MAP4K1Q92918 833 aa7.76□□□□□ -1.17
NF1-221ENST00000581790 TNPO1Q92973 898 aaKnown RBP7.76□□□□□ -1.17
NF1-221ENST00000581790 INTS4Q96HW7 963 aaKnown RBP7.76□□□□□ -1.17
NF1-221ENST00000581790 FAM227BQ96M60 508 aa7.76□□□□□ -1.17
NF1-221ENST00000581790 CCDC85AQ96PX6 553 aaPredicted RBP7.76□□□□□ -1.17
NF1-221ENST00000581790 UTP14AQ9BVJ6 771 aaKnown RBP7.76□□□□□ -1.17
NF1-221ENST00000581790 PUS3Q9BZE2 481 aaKnown RBP7.76□□□□□ -1.17
NF1-221ENST00000581790 TM6SF1Q9BZW5 370 aa7.76□□□□□ -1.17
NF1-221ENST00000581790 ZCCHC2Q9C0B9 1178 aaKnown RBP7.76□□□□□ -1.17
NF1-221ENST00000581790 PAG1Q9NWQ8 432 aa7.76□□□□□ -1.17
NF1-221ENST00000581790 HMG20BQ9P0W2 317 aa7.76□□□□□ -1.17
NF1-221ENST00000581790 RBM8AQ9Y5S9 174 aaKnown RBP7.76□□□□□ -1.17
NF1-221ENST00000581790 CNTNAP4Q9C0A0 1308 aa7.76□□□□□ -1.17
NF1-221ENST00000581790 SPDYE3A6NKU9 549 aa7.75□□□□□ -1.17
NF1-221ENST00000581790 KCNQ2O43526 872 aa7.75□□□□□ -1.17
NF1-221ENST00000581790 CAMTA2O94983 1202 aa7.75□□□□□ -1.17
NF1-221ENST00000581790 CD33P20138 364 aa7.75□□□□□ -1.17
NF1-221ENST00000581790 CASTP20810 708 aaKnown RBP7.75□□□□□ -1.17
NF1-221ENST00000581790 TIMM10P62072 90 aa7.75□□□□□ -1.17
NF1-221ENST00000581790 PTH1RQ03431 593 aa7.75□□□□□ -1.17
NF1-221ENST00000581790 CUL4AQ13619 759 aa7.75□□□□□ -1.17
NF1-221ENST00000581790 NECTIN1Q15223 517 aa7.75□□□□□ -1.17
NF1-221ENST00000581790 ATP2B3Q16720 1220 aa7.75□□□□□ -1.17
NF1-221ENST00000581790 MCMDC2Q4G0Z9 681 aa7.75□□□□□ -1.17
NF1-221ENST00000581790 CREB3L3Q68CJ9 461 aa7.75□□□□□ -1.17
NF1-221ENST00000581790 PRPF40BQ6NWY9 871 aaKnown RBP7.75□□□□□ -1.17
NF1-221ENST00000581790 CLEC4GQ6UXB4 293 aa7.75□□□□□ -1.17
NF1-221ENST00000581790 KCNB2Q92953 911 aa7.75□□□□□ -1.17
NF1-221ENST00000581790 TMX3Q96JJ7 454 aa7.75□□□□□ -1.17
NF1-221ENST00000581790 UPF3BQ9BZI7 483 aaKnown RBP7.75□□□□□ -1.17
NF1-221ENST00000581790 GREM2Q9H772 168 aa7.75□□□□□ -1.17
NF1-221ENST00000581790 HELLSQ9NRZ9 838 aa7.75□□□□□ -1.17
NF1-221ENST00000581790 NIP7Q9Y221 180 aaKnown RBP eCLIP7.75□□□□□ -1.17
NF1-221ENST00000581790 CYP46A1Q9Y6A2 500 aa7.75□□□□□ -1.17
NF1-221ENST00000581790 MYH6P13533 1939 aa7.75□□□□□ -1.17
NF1-221ENST00000581790 MROH5Q6ZUA9 1318 aa7.75□□□□□ -1.17
NF1-221ENST00000581790 RTL9Q8NET4 1388 aa7.74□□□□□ -1.17
NF1-221ENST00000581790 DCDC2BA2VCK2 349 aa7.74□□□□□ -1.17
NF1-221ENST00000581790 GOLIM4O00461 696 aa7.74□□□□□ -1.17
NF1-221ENST00000581790 ATXN7O15265 892 aaPredicted RBP7.74□□□□□ -1.17
NF1-221ENST00000581790 ZFYP08048 801 aaPredicted RBP7.74□□□□□ -1.17
NF1-221ENST00000581790 SSFA2P28290 1259 aa7.74□□□□□ -1.17
NF1-221ENST00000581790 KRT32Q14532 448 aa7.74□□□□□ -1.17
NF1-221ENST00000581790 CCDC152Q4G0S7 254 aa7.74□□□□□ -1.17
NF1-221ENST00000581790 VPS53Q5VIR6 699 aa7.74□□□□□ -1.17
NF1-221ENST00000581790 SUSD4Q5VX71 490 aa7.74□□□□□ -1.17
NF1-221ENST00000581790 NOL8Q76FK4 1167 aaKnown RBP7.74□□□□□ -1.17
NF1-221ENST00000581790 DDX46Q7L014 1031 aaKnown RBP7.74□□□□□ -1.17
NF1-221ENST00000581790 EDC3Q96F86 508 aaKnown RBP7.74□□□□□ -1.17
NF1-221ENST00000581790 GJD4Q96KN9 370 aaPredicted RBP7.74□□□□□ -1.17
NF1-221ENST00000581790 JAKMIP1Q96N16 626 aaKnown RBP7.74□□□□□ -1.17
NF1-221ENST00000581790 TTC14Q96N46 770 aa7.74□□□□□ -1.17
NF1-221ENST00000581790 TRPC5Q9UL62 973 aaPredicted RBP7.74□□□□□ -1.17
NF1-221ENST00000581790 RIPOR2Q9Y4F9 1068 aa7.74□□□□□ -1.17
NF1-221ENST00000581790 ATRNO75882 1429 aa7.74□□□□□ -1.17
NF1-221ENST00000581790 KIAA1551Q9HCM1 1747 aa7.73□□□□□ -1.17
NF1-221ENST00000581790 SLC27A2O14975 620 aa7.73□□□□□ -1.17
NF1-221ENST00000581790 RNF113AO15541 343 aaKnown RBP7.73□□□□□ -1.17
NF1-221ENST00000581790 TAF5LO75529 589 aa7.73□□□□□ -1.17
NF1-221ENST00000581790 MAPTP10636 758 aaKnown RBP7.73□□□□□ -1.17
NF1-221ENST00000581790 ATP4AP20648 1035 aa7.73□□□□□ -1.17
NF1-221ENST00000581790 IGHMBP2P38935 993 aaKnown RBP7.73□□□□□ -1.17
NF1-221ENST00000581790 AK2P54819 239 aa7.73□□□□□ -1.17
NF1-221ENST00000581790 MCCD1P59942 119 aaPredicted RBP7.73□□□□□ -1.17
NF1-221ENST00000581790 SKOR2Q2VWA4 1001 aaPredicted RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms