RNA–Protein interactions for RNA: ENST00000581655.1

CSNK1D-218, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-218ENST00000581655 ZYXQ15942 572 aaKnown RBP15.53■□□□□ 0.08
CSNK1D-218ENST00000581655 CRACR2BQ8N4Y2 399 aaPredicted RBP15.53■□□□□ 0.08
CSNK1D-218ENST00000581655 FERMT2Q96AC1 680 aa15.53■□□□□ 0.08
CSNK1D-218ENST00000581655 TRIM34Q9BYJ4 488 aa15.53■□□□□ 0.08
CSNK1D-218ENST00000581655 GINM1Q9NU53 330 aa15.53■□□□□ 0.08
CSNK1D-218ENST00000581655 USP17L15C9J2P7 530 aa15.52■□□□□ 0.08
CSNK1D-218ENST00000581655 USP17L13C9JLJ4 530 aa15.52■□□□□ 0.08
CSNK1D-218ENST00000581655 USP17L11C9JVI0 530 aa15.52■□□□□ 0.08
CSNK1D-218ENST00000581655 USP17L18D6R9N7 530 aa15.52■□□□□ 0.08
CSNK1D-218ENST00000581655 USP17L22D6RA61 530 aa15.52■□□□□ 0.08
CSNK1D-218ENST00000581655 USP17L17D6RBQ6 530 aa15.52■□□□□ 0.08
CSNK1D-218ENST00000581655 USP17L19D6RCP7 530 aa15.52■□□□□ 0.08
CSNK1D-218ENST00000581655 USP17L20D6RJB6 530 aa15.52■□□□□ 0.08
CSNK1D-218ENST00000581655 ITGB8P26012 769 aa15.52■□□□□ 0.08
CSNK1D-218ENST00000581655 ADCYAP1R1P41586 468 aa15.52■□□□□ 0.08
CSNK1D-218ENST00000581655 USP17L24Q0WX57 530 aa15.52■□□□□ 0.08
CSNK1D-218ENST00000581655 MAPKAPK5Q8IW41 473 aa15.52■□□□□ 0.08
CSNK1D-218ENST00000581655 PPM1EQ8WY54 764 aa15.52■□□□□ 0.08
CSNK1D-218ENST00000581655 COPRSQ9NQ92 184 aa15.52■□□□□ 0.08
CSNK1D-218ENST00000581655 CDK5RAP2Q96SN8 1893 aa15.51■□□□□ 0.07
CSNK1D-218ENST00000581655 IGHA2P01877 340 aa15.51■□□□□ 0.07
CSNK1D-218ENST00000581655 TLE2Q04725 743 aa15.51■□□□□ 0.07
CSNK1D-218ENST00000581655 METTL16Q86W50 562 aaKnown RBP15.51■□□□□ 0.07
CSNK1D-218ENST00000581655 FOXP4Q8IVH2 680 aaPredicted RBP15.51■□□□□ 0.07
CSNK1D-218ENST00000581655 SPATA5Q8NB90 893 aa15.51■□□□□ 0.07
CSNK1D-218ENST00000581655 TGFBRAP1Q8WUH2 860 aa15.51■□□□□ 0.07
CSNK1D-218ENST00000581655 C12orf42Q96LP6 360 aa15.51■□□□□ 0.07
CSNK1D-218ENST00000581655 FEZ1Q99689 392 aa15.51■□□□□ 0.07
CSNK1D-218ENST00000581655 NOL10Q9BSC4 688 aaKnown RBP15.51■□□□□ 0.07
CSNK1D-218ENST00000581655 MRS2Q9HD23 443 aa15.51■□□□□ 0.07
CSNK1D-218ENST00000581655 AATFQ9NY61 560 aaKnown RBP eCLIP15.51■□□□□ 0.07
CSNK1D-218ENST00000581655 BTBD7Q9P203 1132 aa15.51■□□□□ 0.07
CSNK1D-218ENST00000581655 SEPT4O43236 478 aa15.5■□□□□ 0.07
CSNK1D-218ENST00000581655 TFCP2Q12800 502 aa15.5■□□□□ 0.07
CSNK1D-218ENST00000581655 C1orf53Q5VUE5 145 aa15.5■□□□□ 0.07
CSNK1D-218ENST00000581655 CATSPERGQ6ZRH7 1159 aa15.5■□□□□ 0.07
CSNK1D-218ENST00000581655 ATXN2LQ8WWM7 1075 aaKnown RBP15.5■□□□□ 0.07
CSNK1D-218ENST00000581655 SSH1Q8WYL5 1049 aa15.5■□□□□ 0.07
CSNK1D-218ENST00000581655 NEUROD6Q96NK8 337 aa15.5■□□□□ 0.07
CSNK1D-218ENST00000581655 ZNF576Q9H609 170 aa15.5■□□□□ 0.07
CSNK1D-218ENST00000581655 PALD1Q9ULE6 856 aa15.5■□□□□ 0.07
CSNK1D-218ENST00000581655 AKAP2Q9Y2D5 859 aa15.5■□□□□ 0.07
CSNK1D-218ENST00000581655 TACC3Q9Y6A5 838 aa15.5■□□□□ 0.07
CSNK1D-218ENST00000581655 SMCHD1A6NHR9 2005 aa15.5■□□□□ 0.07
CSNK1D-218ENST00000581655 FLT1P17948 1338 aa15.49■□□□□ 0.07
CSNK1D-218ENST00000581655 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.49■□□□□ 0.07
CSNK1D-218ENST00000581655 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.49■□□□□ 0.07
CSNK1D-218ENST00000581655 GH2P01242 217 aa15.49■□□□□ 0.07
CSNK1D-218ENST00000581655 CLTBP09497 229 aa15.49■□□□□ 0.07
CSNK1D-218ENST00000581655 RAG1P15918 1043 aa15.49■□□□□ 0.07
CSNK1D-218ENST00000581655 MAP3K12Q12852 859 aa15.49■□□□□ 0.07
CSNK1D-218ENST00000581655 LRRC41Q15345 812 aa15.49■□□□□ 0.07
CSNK1D-218ENST00000581655 OLFML2BQ68BL8 750 aa15.49■□□□□ 0.07
CSNK1D-218ENST00000581655 DPP9Q86TI2 863 aa15.49■□□□□ 0.07
CSNK1D-218ENST00000581655 ADAMTS19Q8TE59 1207 aa15.49■□□□□ 0.07
CSNK1D-218ENST00000581655 ASB2Q96Q27 587 aa15.49■□□□□ 0.07
CSNK1D-218ENST00000581655 LRP2BPQ9P2M1 347 aa15.49■□□□□ 0.07
CSNK1D-218ENST00000581655 THEGQ9P2T0 379 aa15.49■□□□□ 0.07
CSNK1D-218ENST00000581655 FOCADQ5VW36 1801 aa15.49■□□□□ 0.07
CSNK1D-218ENST00000581655 BAG3O95817 575 aa15.48■□□□□ 0.07
CSNK1D-218ENST00000581655 VCAM1P19320 739 aa15.48■□□□□ 0.07
CSNK1D-218ENST00000581655 ADORA2AP29274 412 aa15.48■□□□□ 0.07
CSNK1D-218ENST00000581655 LBX2Q6XYB7 198 aa15.48■□□□□ 0.07
CSNK1D-218ENST00000581655 TIFAQ96CG3 184 aa15.48■□□□□ 0.07
CSNK1D-218ENST00000581655 UHRF1Q96T88 793 aaPredicted RBP15.48■□□□□ 0.07
CSNK1D-218ENST00000581655 GAS2L1Q99501 681 aaPredicted RBP15.48■□□□□ 0.07
CSNK1D-218ENST00000581655 SAP30BPQ9UHR5 308 aaKnown RBP15.48■□□□□ 0.07
CSNK1D-218ENST00000581655 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.48■□□□□ 0.07
CSNK1D-218ENST00000581655 ZNF236Q9UL36 1845 aa15.47■□□□□ 0.07
CSNK1D-218ENST00000581655 SPDYE16A6NNV3 312 aaPredicted RBP15.47■□□□□ 0.07
CSNK1D-218ENST00000581655 KIAA0355O15063 1070 aa15.47■□□□□ 0.07
CSNK1D-218ENST00000581655 HLA-DOAP06340 250 aa15.47■□□□□ 0.07
CSNK1D-218ENST00000581655 PLCG2P16885 1265 aa15.47■□□□□ 0.07
CSNK1D-218ENST00000581655 HOXD11P31277 338 aaPredicted RBP15.47■□□□□ 0.07
CSNK1D-218ENST00000581655 FPGSQ05932 587 aa15.47■□□□□ 0.07
CSNK1D-218ENST00000581655 FAM47AQ5JRC9 791 aa15.47■□□□□ 0.07
CSNK1D-218ENST00000581655 PRAMEF19Q5SWL8 479 aa15.47■□□□□ 0.07
CSNK1D-218ENST00000581655 GORABQ5T7V8 394 aa15.47■□□□□ 0.07
CSNK1D-218ENST00000581655 NAA16Q6N069 864 aaPredicted RBP15.47■□□□□ 0.07
CSNK1D-218ENST00000581655 ARID4AP29374 1257 aaPredicted RBP15.46■□□□□ 0.07
CSNK1D-218ENST00000581655 MCAMP43121 646 aa15.46■□□□□ 0.07
CSNK1D-218ENST00000581655 USP14P54578 494 aa15.46■□□□□ 0.07
CSNK1D-218ENST00000581655 PPP4CP60510 307 aa15.46■□□□□ 0.07
CSNK1D-218ENST00000581655 ACER1Q8TDN7 264 aa15.46■□□□□ 0.07
CSNK1D-218ENST00000581655 MOV10L1Q9BXT6 1211 aaKnown RBP15.46■□□□□ 0.07
CSNK1D-218ENST00000581655 PRDM12Q9H4Q4 367 aa15.46■□□□□ 0.07
CSNK1D-218ENST00000581655 PHF24Q9UPV7 400 aa15.46■□□□□ 0.07
CSNK1D-218ENST00000581655 CHD9Q3L8U1 2897 aa15.46■□□□□ 0.06
CSNK1D-218ENST00000581655 PQBP1O60828 265 aaKnown RBP15.45■□□□□ 0.06
CSNK1D-218ENST00000581655 COBLO75128 1261 aa15.45■□□□□ 0.06
CSNK1D-218ENST00000581655 MRPS5P82675 430 aaKnown RBP15.45■□□□□ 0.06
CSNK1D-218ENST00000581655 ATF7IPQ6VMQ6 1270 aa15.45■□□□□ 0.06
CSNK1D-218ENST00000581655 ADGRA1Q86SQ6 560 aa15.45■□□□□ 0.06
CSNK1D-218ENST00000581655 KIAA1683Q9H0B3 1180 aa15.45■□□□□ 0.06
CSNK1D-218ENST00000581655 RPAP3Q9H6T3 665 aaPredicted RBP15.45■□□□□ 0.06
CSNK1D-218ENST00000581655 TMEM39AQ9NV64 488 aa15.45■□□□□ 0.06
CSNK1D-218ENST00000581655 PLXNA1Q9UIW2 1896 aa15.45■□□□□ 0.06
CSNK1D-218ENST00000581655 TCF20Q9UGU0 1960 aaKnown RBP15.45■□□□□ 0.06
CSNK1D-218ENST00000581655 MYH1P12882 1939 aa15.45■□□□□ 0.06
CSNK1D-218ENST00000581655 STRNO43815 780 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms