RNA–Protein interactions for RNA: ENST00000581391.5

CUEDC1-209, Transcript of CUE domain containing 1, humanhuman

TSL 2

Gene CUEDC1, Length 857 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-209ENST00000581391 GIMAP6Q6P9H5 292 aa16.28■□□□□ 0.2
CUEDC1-209ENST00000581391 AMOTL1Q8IY63 956 aa16.28■□□□□ 0.2
CUEDC1-209ENST00000581391 PROCA1Q8NCQ7 364 aaPredicted RBP16.28■□□□□ 0.2
CUEDC1-209ENST00000581391 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.28■□□□□ 0.2
CUEDC1-209ENST00000581391 GINM1Q9NU53 330 aa16.28■□□□□ 0.2
CUEDC1-209ENST00000581391 ARPP21Q9UBL0 812 aaPredicted RBP16.28■□□□□ 0.2
CUEDC1-209ENST00000581391 BCRP11274 1271 aa16.27■□□□□ 0.2
CUEDC1-209ENST00000581391 RASA1P20936 1047 aa16.27■□□□□ 0.2
CUEDC1-209ENST00000581391 CTDSPL2Q05D32 466 aa16.27■□□□□ 0.2
CUEDC1-209ENST00000581391 TTC22Q5TAA0 569 aa16.27■□□□□ 0.2
CUEDC1-209ENST00000581391 POTEEQ6S8J3 1075 aa16.27■□□□□ 0.2
CUEDC1-209ENST00000581391 CWC27Q6UX04 472 aaKnown RBP16.27■□□□□ 0.2
CUEDC1-209ENST00000581391 ERO1AQ96HE7 468 aa16.27■□□□□ 0.2
CUEDC1-209ENST00000581391 PARK7Q99497 189 aaKnown RBP16.27■□□□□ 0.2
CUEDC1-209ENST00000581391 P2RX7Q99572 595 aaKnown RBP16.27■□□□□ 0.2
CUEDC1-209ENST00000581391 TBC1D2Q9BYX2 928 aa16.27■□□□□ 0.2
CUEDC1-209ENST00000581391 NAPBQ9H115 298 aa16.27■□□□□ 0.2
CUEDC1-209ENST00000581391 ASCC2Q9H1I8 757 aaPredicted RBP16.27■□□□□ 0.2
CUEDC1-209ENST00000581391 IL25Q9H293 177 aa16.27■□□□□ 0.2
CUEDC1-209ENST00000581391 TMOD4Q9NZQ9 345 aa16.27■□□□□ 0.2
CUEDC1-209ENST00000581391 LOC285556D6RIA3 1793 aa16.26■□□□□ 0.19
CUEDC1-209ENST00000581391 CCDC85CA6NKD9 419 aa16.26■□□□□ 0.19
CUEDC1-209ENST00000581391 C19orf81C9J6K1 198 aa16.26■□□□□ 0.19
CUEDC1-209ENST00000581391 LACTBP83111 547 aaPredicted RBP16.26■□□□□ 0.19
CUEDC1-209ENST00000581391 USP17L2Q6R6M4 530 aa16.26■□□□□ 0.19
CUEDC1-209ENST00000581391 ANKRD13CQ8N6S4 541 aa16.26■□□□□ 0.19
CUEDC1-209ENST00000581391 FEZ1Q99689 392 aa16.26■□□□□ 0.19
CUEDC1-209ENST00000581391 EFCC1Q9HA90 598 aa16.26■□□□□ 0.19
CUEDC1-209ENST00000581391 MKNK2Q9HBH9 465 aa16.26■□□□□ 0.19
CUEDC1-209ENST00000581391 DOCK3Q8IZD9 2030 aa16.26■□□□□ 0.19
CUEDC1-209ENST00000581391 FGAP02671 866 aa16.25■□□□□ 0.19
CUEDC1-209ENST00000581391 HSPD1P10809 573 aaKnown RBP16.25■□□□□ 0.19
CUEDC1-209ENST00000581391 ATP2B2Q01814 1243 aa16.25■□□□□ 0.19
CUEDC1-209ENST00000581391 PPARAQ07869 468 aa16.25■□□□□ 0.19
CUEDC1-209ENST00000581391 FAM47AQ5JRC9 791 aa16.25■□□□□ 0.19
CUEDC1-209ENST00000581391 TMEM179Q6ZVK1 233 aa16.25■□□□□ 0.19
CUEDC1-209ENST00000581391 NKX2-3Q8TAU0 364 aa16.25■□□□□ 0.19
CUEDC1-209ENST00000581391 SMCR8Q8TEV9 937 aaPredicted RBP16.25■□□□□ 0.19
CUEDC1-209ENST00000581391 NACAP1Q9BZK3 213 aa16.25■□□□□ 0.19
CUEDC1-209ENST00000581391 HPS5Q9UPZ3 1129 aa16.25■□□□□ 0.19
CUEDC1-209ENST00000581391 SLC45A1Q9Y2W3 748 aa16.25■□□□□ 0.19
CUEDC1-209ENST00000581391 CENPFP49454 3210 aa16.24■□□□□ 0.19
CUEDC1-209ENST00000581391 EEF2P13639 858 aaKnown RBP16.24■□□□□ 0.19
CUEDC1-209ENST00000581391 PSMC4P43686 418 aa16.24■□□□□ 0.19
CUEDC1-209ENST00000581391 TRIM47Q96LD4 638 aa16.24■□□□□ 0.19
CUEDC1-209ENST00000581391 CCDC17Q96LX7 622 aa16.24■□□□□ 0.19
CUEDC1-209ENST00000581391 KIAA1683Q9H0B3 1180 aa16.24■□□□□ 0.19
CUEDC1-209ENST00000581391 HTTP42858 3142 aa16.24■□□□□ 0.19
CUEDC1-209ENST00000581391 CCDC171Q6TFL3 1326 aa16.23■□□□□ 0.19
CUEDC1-209ENST00000581391 VCAM1P19320 739 aa16.23■□□□□ 0.19
CUEDC1-209ENST00000581391 OSBPP22059 807 aa16.23■□□□□ 0.19
CUEDC1-209ENST00000581391 HOXA7P31268 230 aaPredicted RBP16.23■□□□□ 0.19
CUEDC1-209ENST00000581391 HAND2P61296 217 aa16.23■□□□□ 0.19
CUEDC1-209ENST00000581391 ICA1Q05084 483 aa16.23■□□□□ 0.19
CUEDC1-209ENST00000581391 SPICE1Q8N0Z3 855 aa16.23■□□□□ 0.19
CUEDC1-209ENST00000581391 TXNRD2Q9NNW7 524 aa16.23■□□□□ 0.19
CUEDC1-209ENST00000581391 DIAPH3Q9NSV4 1193 aa16.23■□□□□ 0.19
CUEDC1-209ENST00000581391 PTPN22Q9Y2R2 807 aa16.23■□□□□ 0.19
CUEDC1-209ENST00000581391 FMNL1O95466 1100 aaPredicted RBP16.22■□□□□ 0.19
CUEDC1-209ENST00000581391 IRX3P78415 501 aaPredicted RBP16.22■□□□□ 0.19
CUEDC1-209ENST00000581391 ALX1Q15699 326 aa16.22■□□□□ 0.19
CUEDC1-209ENST00000581391 Q3C1V9 767 aa16.22■□□□□ 0.19
CUEDC1-209ENST00000581391 FBXO46Q6PJ61 603 aaPredicted RBP16.22■□□□□ 0.19
CUEDC1-209ENST00000581391 ZNF444Q8N0Y2 327 aaPredicted RBP16.22■□□□□ 0.19
CUEDC1-209ENST00000581391 CHMP4CQ96CF2 233 aa16.22■□□□□ 0.19
CUEDC1-209ENST00000581391 C12orf42Q96LP6 360 aa16.22■□□□□ 0.19
CUEDC1-209ENST00000581391 RPAP3Q9H6T3 665 aaPredicted RBP16.22■□□□□ 0.19
CUEDC1-209ENST00000581391 RBPJLQ9UBG7 517 aa16.22■□□□□ 0.19
CUEDC1-209ENST00000581391 PTCH2Q9Y6C5 1203 aa16.22■□□□□ 0.19
CUEDC1-209ENST00000581391 ROBO3Q96MS0 1386 aa16.22■□□□□ 0.19
CUEDC1-209ENST00000581391 USP14P54578 494 aa16.21■□□□□ 0.19
CUEDC1-209ENST00000581391 HERVK_113P62684 666 aa16.21■□□□□ 0.19
CUEDC1-209ENST00000581391 CATSPERGQ6ZRH7 1159 aa16.21■□□□□ 0.19
CUEDC1-209ENST00000581391 CENPQQ7L2Z9 268 aaPredicted RBP16.21■□□□□ 0.19
CUEDC1-209ENST00000581391 NBPF3Q9H094 633 aa16.21■□□□□ 0.19
CUEDC1-209ENST00000581391 PNMA3Q9UL41 463 aa16.21■□□□□ 0.19
CUEDC1-209ENST00000581391 GABRQQ9UN88 632 aa16.21■□□□□ 0.19
CUEDC1-209ENST00000581391 TMX2Q9Y320 296 aa16.21■□□□□ 0.19
CUEDC1-209ENST00000581391 IGKV6D-41A0A0C4DH26 115 aa16.2■□□□□ 0.18
CUEDC1-209ENST00000581391 USP17L15C9J2P7 530 aa16.2■□□□□ 0.18
CUEDC1-209ENST00000581391 USP17L13C9JLJ4 530 aa16.2■□□□□ 0.18
CUEDC1-209ENST00000581391 USP17L11C9JVI0 530 aa16.2■□□□□ 0.18
CUEDC1-209ENST00000581391 USP17L18D6R9N7 530 aa16.2■□□□□ 0.18
CUEDC1-209ENST00000581391 USP17L22D6RA61 530 aa16.2■□□□□ 0.18
CUEDC1-209ENST00000581391 USP17L17D6RBQ6 530 aa16.2■□□□□ 0.18
CUEDC1-209ENST00000581391 USP17L19D6RCP7 530 aa16.2■□□□□ 0.18
CUEDC1-209ENST00000581391 USP17L20D6RJB6 530 aa16.2■□□□□ 0.18
CUEDC1-209ENST00000581391 RAD21O60216 631 aa16.2■□□□□ 0.18
CUEDC1-209ENST00000581391 NMT2O60551 498 aa16.2■□□□□ 0.18
CUEDC1-209ENST00000581391 TFAP4Q01664 338 aa16.2■□□□□ 0.18
CUEDC1-209ENST00000581391 USP17L24Q0WX57 530 aa16.2■□□□□ 0.18
CUEDC1-209ENST00000581391 PABPC4Q13310 644 aaKnown RBP eCLIP16.2■□□□□ 0.18
CUEDC1-209ENST00000581391 KIF22Q14807 665 aa16.2■□□□□ 0.18
CUEDC1-209ENST00000581391 PKN2Q16513 984 aaKnown RBP16.2■□□□□ 0.18
CUEDC1-209ENST00000581391 SAMD1Q6SPF0 538 aaPredicted RBP16.2■□□□□ 0.18
CUEDC1-209ENST00000581391 CCDC136Q96JN2 1154 aa16.2■□□□□ 0.18
CUEDC1-209ENST00000581391 PAGR1Q9BTK6 254 aa16.2■□□□□ 0.18
CUEDC1-209ENST00000581391 KANSL2Q9H9L4 492 aa16.2■□□□□ 0.18
CUEDC1-209ENST00000581391 CLIP2Q9UDT6 1046 aa16.2■□□□□ 0.18
CUEDC1-209ENST00000581391 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms