RNA–Protein interactions for RNA: ENST00000581080.1

RARA-AS1-201, RARA antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene RARA-AS1, Length 1,790 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-AS1-201ENST00000581080 NSUN7Q8NE18 718 aaKnown RBP27.33■■□□□ 1.97
RARA-AS1-201ENST00000581080 SMARCC2Q8TAQ2 1214 aa27.33■■□□□ 1.97
RARA-AS1-201ENST00000581080 KAT14Q9H8E8 782 aa27.33■■□□□ 1.97
RARA-AS1-201ENST00000581080 MTMR4Q9NYA4 1195 aa27.33■■□□□ 1.97
RARA-AS1-201ENST00000581080 DTNBO60941 627 aa27.32■■□□□ 1.96
RARA-AS1-201ENST00000581080 DDAH1O94760 285 aa27.32■■□□□ 1.96
RARA-AS1-201ENST00000581080 CCDC144CPQ8IYA2 1237 aa27.32■■□□□ 1.96
RARA-AS1-201ENST00000581080 FANCBQ8NB91 859 aa27.32■■□□□ 1.96
RARA-AS1-201ENST00000581080 NUP133Q8WUM0 1156 aa27.32■■□□□ 1.96
RARA-AS1-201ENST00000581080 FAM217BQ9NTX9 383 aaPredicted RBP27.32■■□□□ 1.96
RARA-AS1-201ENST00000581080 MPHOSPH10O00566 681 aaKnown RBP27.32■■□□□ 1.96
RARA-AS1-201ENST00000581080 CPLX1O14810 134 aa27.32■■□□□ 1.96
RARA-AS1-201ENST00000581080 CALM1P0DP23 149 aa27.32■■□□□ 1.96
RARA-AS1-201ENST00000581080 CALM2P0DP24 149 aa27.32■■□□□ 1.96
RARA-AS1-201ENST00000581080 CALM3P0DP25 149 aa27.32■■□□□ 1.96
RARA-AS1-201ENST00000581080 CDC27P30260 824 aa27.32■■□□□ 1.96
RARA-AS1-201ENST00000581080 ADD1P35611 737 aaKnown RBP27.32■■□□□ 1.96
RARA-AS1-201ENST00000581080 PPP2R5BQ15173 497 aa27.32■■□□□ 1.96
RARA-AS1-201ENST00000581080 TMEM47Q9BQJ4 181 aa27.32■■□□□ 1.96
RARA-AS1-201ENST00000581080 JAK2O60674 1132 aa27.31■■□□□ 1.96
RARA-AS1-201ENST00000581080 MIGA2Q7L4E1 593 aa27.31■■□□□ 1.96
RARA-AS1-201ENST00000581080 PITPNM2Q9BZ72 1349 aa27.31■■□□□ 1.96
RARA-AS1-201ENST00000581080 CCDC196A0A1B0GTZ2 297 aa27.3■■□□□ 1.96
RARA-AS1-201ENST00000581080 RTN1Q16799 776 aa27.3■■□□□ 1.96
RARA-AS1-201ENST00000581080 PNMA1Q8ND90 353 aa27.3■■□□□ 1.96
RARA-AS1-201ENST00000581080 GREB1LQ9C091 1923 aaPredicted RBP27.3■■□□□ 1.96
RARA-AS1-201ENST00000581080 ABCB5Q2M3G0 1257 aa27.3■■□□□ 1.96
RARA-AS1-201ENST00000581080 PTPDC1A2A3K4 754 aa27.29■■□□□ 1.96
RARA-AS1-201ENST00000581080 TOP1P11387 765 aaKnown RBP27.29■■□□□ 1.96
RARA-AS1-201ENST00000581080 EPHX2P34913 555 aa27.29■■□□□ 1.96
RARA-AS1-201ENST00000581080 NUCB2P80303 420 aa27.29■■□□□ 1.96
RARA-AS1-201ENST00000581080 HMGN5P82970 282 aaKnown RBP27.29■■□□□ 1.96
RARA-AS1-201ENST00000581080 RRP1BQ14684 758 aaKnown RBP27.29■■□□□ 1.96
RARA-AS1-201ENST00000581080 PPP4R3BQ5MIZ7 849 aa27.29■■□□□ 1.96
RARA-AS1-201ENST00000581080 TMEM179Q6ZVK1 233 aa27.29■■□□□ 1.96
RARA-AS1-201ENST00000581080 USP50Q70EL3 339 aaPredicted RBP27.29■■□□□ 1.96
RARA-AS1-201ENST00000581080 PPP2R3BQ9Y5P8 575 aa27.29■■□□□ 1.96
RARA-AS1-201ENST00000581080 GDF11O95390 407 aa27.28■■□□□ 1.96
RARA-AS1-201ENST00000581080 TTLL1O95922 423 aa27.28■■□□□ 1.96
RARA-AS1-201ENST00000581080 NTRK3Q16288 839 aa27.28■■□□□ 1.96
RARA-AS1-201ENST00000581080 CPLX2Q6PUV4 134 aaKnown RBP27.28■■□□□ 1.96
RARA-AS1-201ENST00000581080 KANSL2Q9H9L4 492 aa27.28■■□□□ 1.96
RARA-AS1-201ENST00000581080 IQCA1LA6NCM1 817 aa27.27■■□□□ 1.96
RARA-AS1-201ENST00000581080 PKP1Q13835 747 aa27.27■■□□□ 1.96
RARA-AS1-201ENST00000581080 SHROOM1Q2M3G4 852 aaPredicted RBP27.27■■□□□ 1.96
RARA-AS1-201ENST00000581080 DDX11Q96FC9 970 aa27.27■■□□□ 1.96
RARA-AS1-201ENST00000581080 CDKL5O76039 1030 aa27.27■■□□□ 1.96
RARA-AS1-201ENST00000581080 NBPF12Q5TAG4 269 aaPredicted RBP27.27■■□□□ 1.96
RARA-AS1-201ENST00000581080 MAP3K14Q99558 947 aa27.27■■□□□ 1.96
RARA-AS1-201ENST00000581080 CABP5Q9NP86 173 aa27.27■■□□□ 1.96
RARA-AS1-201ENST00000581080 GUCY1A2P33402 732 aa27.26■■□□□ 1.95
RARA-AS1-201ENST00000581080 CLEC10AQ8IUN9 316 aa27.26■■□□□ 1.95
RARA-AS1-201ENST00000581080 RBM28Q9NW13 759 aaKnown RBP27.26■■□□□ 1.95
RARA-AS1-201ENST00000581080 CLIP2Q9UDT6 1046 aa27.26■■□□□ 1.95
RARA-AS1-201ENST00000581080 SCN4AP35499 1836 aa27.26■■□□□ 1.95
RARA-AS1-201ENST00000581080 GH2P01242 217 aa27.25■■□□□ 1.95
RARA-AS1-201ENST00000581080 SYT1P21579 422 aa27.25■■□□□ 1.95
RARA-AS1-201ENST00000581080 JAG1P78504 1218 aa27.25■■□□□ 1.95
RARA-AS1-201ENST00000581080 CTCFLQ8NI51 663 aaPredicted RBP27.25■■□□□ 1.95
RARA-AS1-201ENST00000581080 ZC3H15Q8WU90 426 aaKnown RBP27.25■■□□□ 1.95
RARA-AS1-201ENST00000581080 DCPSQ96C86 337 aaKnown RBP27.25■■□□□ 1.95
RARA-AS1-201ENST00000581080 POLR2AP24928 1970 aaKnown RBP27.25■■□□□ 1.95
RARA-AS1-201ENST00000581080 POTECB2RU33 542 aa27.25■■□□□ 1.95
RARA-AS1-201ENST00000581080 PPFIA3O75145 1194 aa27.25■■□□□ 1.95
RARA-AS1-201ENST00000581080 FDPSP14324 419 aaKnown RBP27.25■■□□□ 1.95
RARA-AS1-201ENST00000581080 IFNAR1P17181 557 aa27.25■■□□□ 1.95
RARA-AS1-201ENST00000581080 PDCP20941 246 aa27.25■■□□□ 1.95
RARA-AS1-201ENST00000581080 SEPT2Q15019 361 aa27.25■■□□□ 1.95
RARA-AS1-201ENST00000581080 RAB3GAP1Q15042 981 aa27.25■■□□□ 1.95
RARA-AS1-201ENST00000581080 FAM184AQ8NB25 1140 aa27.25■■□□□ 1.95
RARA-AS1-201ENST00000581080 HOOK2Q96ED9 719 aa27.25■■□□□ 1.95
RARA-AS1-201ENST00000581080 PHF20L1A8MW92 1017 aa27.24■■□□□ 1.95
RARA-AS1-201ENST00000581080 LARP1BQ659C4 914 aaKnown RBP27.24■■□□□ 1.95
RARA-AS1-201ENST00000581080 TAF1DQ9H5J8 278 aaPredicted RBP27.24■■□□□ 1.95
RARA-AS1-201ENST00000581080 NYAP2Q9P242 653 aa27.24■■□□□ 1.95
RARA-AS1-201ENST00000581080 DCAF8L1A6NGE4 600 aa27.23■■□□□ 1.95
RARA-AS1-201ENST00000581080 PDIA4P13667 645 aaKnown RBP27.23■■□□□ 1.95
RARA-AS1-201ENST00000581080 KIF5BP33176 963 aa27.23■■□□□ 1.95
RARA-AS1-201ENST00000581080 CAP2P40123 477 aa27.23■■□□□ 1.95
RARA-AS1-201ENST00000581080 PRAMEF18Q5VWM3 479 aa27.23■■□□□ 1.95
RARA-AS1-201ENST00000581080 MKL1Q969V6 931 aa27.23■■□□□ 1.95
RARA-AS1-201ENST00000581080 KIF3AQ9Y496 699 aa27.23■■□□□ 1.95
RARA-AS1-201ENST00000581080 WDR90Q96KV7 1748 aa27.23■■□□□ 1.95
RARA-AS1-201ENST00000581080 STX6O43752 255 aa27.22■■□□□ 1.95
RARA-AS1-201ENST00000581080 EEF2P13639 858 aaKnown RBP27.22■■□□□ 1.95
RARA-AS1-201ENST00000581080 SIAH1Q8IUQ4 282 aa27.22■■□□□ 1.95
RARA-AS1-201ENST00000581080 SULF1Q8IWU6 871 aa27.22■■□□□ 1.95
RARA-AS1-201ENST00000581080 ORC3Q9UBD5 711 aaPredicted RBP27.22■■□□□ 1.95
RARA-AS1-201ENST00000581080 ZDHHC9Q9Y397 364 aa27.22■■□□□ 1.95
RARA-AS1-201ENST00000581080 ICA1Q05084 483 aa27.22■■□□□ 1.95
RARA-AS1-201ENST00000581080 GRM4Q14833 912 aa27.22■■□□□ 1.95
RARA-AS1-201ENST00000581080 DCAF15Q66K64 600 aa27.22■■□□□ 1.95
RARA-AS1-201ENST00000581080 PHKBQ93100 1093 aa27.22■■□□□ 1.95
RARA-AS1-201ENST00000581080 ZBTB21Q9ULJ3 1066 aa27.22■■□□□ 1.95
RARA-AS1-201ENST00000581080 BRD1O95696 1058 aa27.21■■□□□ 1.95
RARA-AS1-201ENST00000581080 NBPF11Q86T75 865 aa27.21■■□□□ 1.95
RARA-AS1-201ENST00000581080 PNMA8AQ86V59 439 aaPredicted RBP27.21■■□□□ 1.95
RARA-AS1-201ENST00000581080 CMTR1Q8N1G2 835 aaKnown RBP27.21■■□□□ 1.95
RARA-AS1-201ENST00000581080 LRRC47Q8N1G4 583 aaKnown RBP27.21■■□□□ 1.95
RARA-AS1-201ENST00000581080 ATP2B2Q01814 1243 aa27.2■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms