RNA–Protein interactions for RNA: ENST00000581068.5

SKA2-206, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-206ENST00000581068 CDKL5O76039 1030 aa12.89□□□□□ -0.35
SKA2-206ENST00000581068 CTDNEP1O95476 244 aa12.89□□□□□ -0.35
SKA2-206ENST00000581068 PDCP20941 246 aa12.89□□□□□ -0.35
SKA2-206ENST00000581068 RASA3Q14644 834 aa12.89□□□□□ -0.35
SKA2-206ENST00000581068 RTN1Q16799 776 aa12.89□□□□□ -0.35
SKA2-206ENST00000581068 APOBEC3FQ8IUX4 373 aaKnown RBP12.89□□□□□ -0.35
SKA2-206ENST00000581068 FANCBQ8NB91 859 aa12.89□□□□□ -0.35
SKA2-206ENST00000581068 TRPM4Q8TD43 1214 aa12.89□□□□□ -0.35
SKA2-206ENST00000581068 NUP133Q8WUM0 1156 aa12.89□□□□□ -0.35
SKA2-206ENST00000581068 MYL10Q9BUA6 226 aa12.89□□□□□ -0.35
SKA2-206ENST00000581068 TMEM39BQ9GZU3 492 aa12.89□□□□□ -0.35
SKA2-206ENST00000581068 DNAJC18Q9H819 358 aa12.89□□□□□ -0.35
SKA2-206ENST00000581068 ADARB2Q9NS39 739 aaKnown RBP12.89□□□□□ -0.35
SKA2-206ENST00000581068 PGAP2Q9UHJ9 254 aa12.89□□□□□ -0.35
SKA2-206ENST00000581068 KIF3AQ9Y496 699 aa12.89□□□□□ -0.35
SKA2-206ENST00000581068 IGKV6D-41A0A0C4DH26 115 aa12.88□□□□□ -0.35
SKA2-206ENST00000581068 PTPDC1A2A3K4 754 aa12.88□□□□□ -0.35
SKA2-206ENST00000581068 MPHOSPH10O00566 681 aaKnown RBP12.88□□□□□ -0.35
SKA2-206ENST00000581068 JAK2O60674 1132 aa12.88□□□□□ -0.35
SKA2-206ENST00000581068 TOP1P11387 765 aaKnown RBP12.88□□□□□ -0.35
SKA2-206ENST00000581068 RXRAP19793 462 aa12.88□□□□□ -0.35
SKA2-206ENST00000581068 CDC27P30260 824 aa12.88□□□□□ -0.35
SKA2-206ENST00000581068 ADD1P35611 737 aaKnown RBP12.88□□□□□ -0.35
SKA2-206ENST00000581068 NOVP48745 357 aa12.88□□□□□ -0.35
SKA2-206ENST00000581068 RAB3GAP1Q15042 981 aa12.88□□□□□ -0.35
SKA2-206ENST00000581068 CCDC144CPQ8IYA2 1237 aa12.88□□□□□ -0.35
SKA2-206ENST00000581068 FAM184AQ8NB25 1140 aa12.88□□□□□ -0.35
SKA2-206ENST00000581068 MAP3K14Q99558 947 aa12.88□□□□□ -0.35
SKA2-206ENST00000581068 TMEM47Q9BQJ4 181 aa12.88□□□□□ -0.35
SKA2-206ENST00000581068 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.88□□□□□ -0.35
SKA2-206ENST00000581068 FAM217BQ9NTX9 383 aaPredicted RBP12.88□□□□□ -0.35
SKA2-206ENST00000581068 RBM28Q9NW13 759 aaKnown RBP12.88□□□□□ -0.35
SKA2-206ENST00000581068 MTMR4Q9NYA4 1195 aa12.88□□□□□ -0.35
SKA2-206ENST00000581068 SIPA1L1O43166 1804 aa12.88□□□□□ -0.35
SKA2-206ENST00000581068 GLTPD2A6NH11 291 aa12.87□□□□□ -0.35
SKA2-206ENST00000581068 FAM196BA6NMK8 535 aa12.87□□□□□ -0.35
SKA2-206ENST00000581068 SLURP2P0DP57 97 aa12.87□□□□□ -0.35
SKA2-206ENST00000581068 HIRAP54198 1017 aaPredicted RBP12.87□□□□□ -0.35
SKA2-206ENST00000581068 MAP3K10Q02779 954 aa12.87□□□□□ -0.35
SKA2-206ENST00000581068 TROAPQ12815 778 aa12.87□□□□□ -0.35
SKA2-206ENST00000581068 ABCB5Q2M3G0 1257 aa12.87□□□□□ -0.35
SKA2-206ENST00000581068 ANGEL2Q5VTE6 544 aaKnown RBP12.87□□□□□ -0.35
SKA2-206ENST00000581068 LARP1BQ659C4 914 aaKnown RBP12.87□□□□□ -0.35
SKA2-206ENST00000581068 PNMA1Q8ND90 353 aa12.87□□□□□ -0.35
SKA2-206ENST00000581068 CTCFLQ8NI51 663 aaPredicted RBP12.87□□□□□ -0.35
SKA2-206ENST00000581068 DDX11Q96FC9 970 aa12.87□□□□□ -0.35
SKA2-206ENST00000581068 CEP95Q96GE4 821 aa12.87□□□□□ -0.35
SKA2-206ENST00000581068 L3MBTL3Q96JM7 780 aaPredicted RBP12.87□□□□□ -0.35
SKA2-206ENST00000581068 CABP5Q9NP86 173 aa12.87□□□□□ -0.35
SKA2-206ENST00000581068 STX8Q9UNK0 236 aa12.87□□□□□ -0.35
SKA2-206ENST00000581068 ASTN2O75129 1339 aaPredicted RBP12.87□□□□□ -0.35
SKA2-206ENST00000581068 WDR33Q9C0J8 1336 aaKnown RBP12.87□□□□□ -0.35
SKA2-206ENST00000581068 STX6O43752 255 aa12.86□□□□□ -0.35
SKA2-206ENST00000581068 DTNBO60941 627 aa12.86□□□□□ -0.35
SKA2-206ENST00000581068 BRD1O95696 1058 aa12.86□□□□□ -0.35
SKA2-206ENST00000581068 TTLL1O95922 423 aa12.86□□□□□ -0.35
SKA2-206ENST00000581068 IFNAR1P17181 557 aa12.86□□□□□ -0.35
SKA2-206ENST00000581068 SYT1P21579 422 aa12.86□□□□□ -0.35
SKA2-206ENST00000581068 KIF5BP33176 963 aa12.86□□□□□ -0.35
SKA2-206ENST00000581068 SSRP1Q08945 709 aaKnown RBP12.86□□□□□ -0.35
SKA2-206ENST00000581068 TMEM179Q6ZVK1 233 aa12.86□□□□□ -0.35
SKA2-206ENST00000581068 HOOK2Q96ED9 719 aa12.86□□□□□ -0.35
SKA2-206ENST00000581068 TEPSINQ96N21 525 aa12.86□□□□□ -0.35
SKA2-206ENST00000581068 DEFB129Q9H1M3 183 aa12.86□□□□□ -0.35
SKA2-206ENST00000581068 KANSL2Q9H9L4 492 aa12.86□□□□□ -0.35
SKA2-206ENST00000581068 ORC3Q9UBD5 711 aaPredicted RBP12.86□□□□□ -0.35
SKA2-206ENST00000581068 PPP2R3BQ9Y5P8 575 aa12.86□□□□□ -0.35
SKA2-206ENST00000581068 PITPNM2Q9BZ72 1349 aa12.86□□□□□ -0.35
SKA2-206ENST00000581068 GNAQP50148 359 aa12.85□□□□□ -0.35
SKA2-206ENST00000581068 GRM4Q14833 912 aa12.85□□□□□ -0.35
SKA2-206ENST00000581068 NTRK3Q16288 839 aa12.85□□□□□ -0.35
SKA2-206ENST00000581068 USP50Q70EL3 339 aaPredicted RBP12.85□□□□□ -0.35
SKA2-206ENST00000581068 GGA3Q9NZ52 723 aa12.85□□□□□ -0.35
SKA2-206ENST00000581068 NYAP2Q9P242 653 aa12.85□□□□□ -0.35
SKA2-206ENST00000581068 CLIP2Q9UDT6 1046 aa12.85□□□□□ -0.35
SKA2-206ENST00000581068 ZDHHC9Q9Y397 364 aa12.85□□□□□ -0.35
SKA2-206ENST00000581068 STK36Q9NRP7 1315 aa12.85□□□□□ -0.35
SKA2-206ENST00000581068 MYH8P13535 1937 aa12.84□□□□□ -0.35
SKA2-206ENST00000581068 GDF11O95390 407 aa12.84□□□□□ -0.35
SKA2-206ENST00000581068 FMNL1O95466 1100 aaPredicted RBP12.84□□□□□ -0.35
SKA2-206ENST00000581068 ZSCAN22P10073 491 aaPredicted RBP12.84□□□□□ -0.35
SKA2-206ENST00000581068 FDPSP14324 419 aaKnown RBP12.84□□□□□ -0.35
SKA2-206ENST00000581068 PKP1Q13835 747 aa12.84□□□□□ -0.35
SKA2-206ENST00000581068 SEPT2Q15019 361 aa12.84□□□□□ -0.35
SKA2-206ENST00000581068 DCAF15Q66K64 600 aa12.84□□□□□ -0.35
SKA2-206ENST00000581068 MIGA2Q7L4E1 593 aa12.84□□□□□ -0.35
SKA2-206ENST00000581068 CDAN1Q8IWY9 1227 aa12.84□□□□□ -0.35
SKA2-206ENST00000581068 TRIM22Q8IYM9 498 aa12.84□□□□□ -0.35
SKA2-206ENST00000581068 WASF1Q92558 559 aa12.84□□□□□ -0.35
SKA2-206ENST00000581068 TNPO1Q92973 898 aaKnown RBP12.84□□□□□ -0.35
SKA2-206ENST00000581068 MKL1Q969V6 931 aa12.84□□□□□ -0.35
SKA2-206ENST00000581068 DCPSQ96C86 337 aaKnown RBP12.84□□□□□ -0.35
SKA2-206ENST00000581068 SCAF8Q9UPN6 1271 aaKnown RBP12.84□□□□□ -0.35
SKA2-206ENST00000581068 IQCA1LA6NCM1 817 aa12.83□□□□□ -0.36
SKA2-206ENST00000581068 H3BQV1 296 aa12.83□□□□□ -0.36
SKA2-206ENST00000581068 GH2P01242 217 aa12.83□□□□□ -0.36
SKA2-206ENST00000581068 EEF2P13639 858 aaKnown RBP12.83□□□□□ -0.36
SKA2-206ENST00000581068 GUCY1A2P33402 732 aa12.83□□□□□ -0.36
SKA2-206ENST00000581068 EPHX2P34913 555 aa12.83□□□□□ -0.36
SKA2-206ENST00000581068 ATP2B2Q01814 1243 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 134.8 ms