RNA–Protein interactions for RNA: ENST00000580991.1

IFT20-211, Transcript of intraflagellar transport 20, humanhuman

TSL 4

Gene IFT20, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-211ENST00000580991 CENPBP07199 599 aaPredicted RBP18.08■□□□□ 0.48
IFT20-211ENST00000580991 CYP2C19P33261 490 aa18.08■□□□□ 0.48
IFT20-211ENST00000580991 USP17L24Q0WX57 530 aa18.08■□□□□ 0.48
IFT20-211ENST00000580991 GRB14Q14449 540 aa18.08■□□□□ 0.48
IFT20-211ENST00000580991 SHROOM1Q2M3G4 852 aaPredicted RBP18.08■□□□□ 0.48
IFT20-211ENST00000580991 TJAP1Q5JTD0 557 aa18.08■□□□□ 0.48
IFT20-211ENST00000580991 GJC2Q5T442 439 aaPredicted RBP18.08■□□□□ 0.48
IFT20-211ENST00000580991 GORABQ5T7V8 394 aa18.08■□□□□ 0.48
IFT20-211ENST00000580991 LRP2BPQ9P2M1 347 aa18.08■□□□□ 0.48
IFT20-211ENST00000580991 TNFRSF10AO00220 468 aa18.07■□□□□ 0.48
IFT20-211ENST00000580991 CYBAP13498 195 aa18.07■□□□□ 0.48
IFT20-211ENST00000580991 SNX17Q15036 470 aa18.07■□□□□ 0.48
IFT20-211ENST00000580991 MAPKAPK5Q8IW41 473 aa18.07■□□□□ 0.48
IFT20-211ENST00000580991 TGFBRAP1Q8WUH2 860 aa18.07■□□□□ 0.48
IFT20-211ENST00000580991 C12orf42Q96LP6 360 aa18.07■□□□□ 0.48
IFT20-211ENST00000580991 AATFQ9NY61 560 aaKnown RBP eCLIP18.07■□□□□ 0.48
IFT20-211ENST00000580991 FLT1P17948 1338 aa18.06■□□□□ 0.48
IFT20-211ENST00000580991 ZNF521Q96K83 1311 aa18.06■□□□□ 0.48
IFT20-211ENST00000580991 ARID4AP29374 1257 aaPredicted RBP18.06■□□□□ 0.48
IFT20-211ENST00000580991 ALDH1L2Q3SY69 923 aa18.06■□□□□ 0.48
IFT20-211ENST00000580991 TRPV1Q8NER1 839 aa18.06■□□□□ 0.48
IFT20-211ENST00000580991 NPLOC4Q8TAT6 608 aa18.06■□□□□ 0.48
IFT20-211ENST00000580991 FEZ1Q99689 392 aa18.06■□□□□ 0.48
IFT20-211ENST00000580991 PDLIM7Q9NR12 457 aa18.06■□□□□ 0.48
IFT20-211ENST00000580991 PALD1Q9ULE6 856 aa18.06■□□□□ 0.48
IFT20-211ENST00000580991 IGHA2P01877 340 aa18.05■□□□□ 0.48
IFT20-211ENST00000580991 PPP4CP60510 307 aa18.05■□□□□ 0.48
IFT20-211ENST00000580991 TRIM60Q495X7 471 aa18.05■□□□□ 0.48
IFT20-211ENST00000580991 C1orf53Q5VUE5 145 aa18.05■□□□□ 0.48
IFT20-211ENST00000580991 NAA16Q6N069 864 aaPredicted RBP18.05■□□□□ 0.48
IFT20-211ENST00000580991 ATF7IPQ6VMQ6 1270 aa18.05■□□□□ 0.48
IFT20-211ENST00000580991 LBX2Q6XYB7 198 aa18.05■□□□□ 0.48
IFT20-211ENST00000580991 CATSPERGQ6ZRH7 1159 aa18.05■□□□□ 0.48
IFT20-211ENST00000580991 CDK5RAP2Q96SN8 1893 aa18.05■□□□□ 0.48
IFT20-211ENST00000580991 GH2P01242 217 aa18.04■□□□□ 0.48
IFT20-211ENST00000580991 HLA-DOAP06340 250 aa18.04■□□□□ 0.48
IFT20-211ENST00000580991 MCAMP43121 646 aa18.04■□□□□ 0.48
IFT20-211ENST00000580991 USP14P54578 494 aa18.04■□□□□ 0.48
IFT20-211ENST00000580991 ZYXQ15942 572 aaKnown RBP18.04■□□□□ 0.48
IFT20-211ENST00000580991 DPP9Q86TI2 863 aa18.04■□□□□ 0.48
IFT20-211ENST00000580991 RNPC3Q96LT9 517 aaKnown RBP18.04■□□□□ 0.48
IFT20-211ENST00000580991 FOCADQ5VW36 1801 aa18.04■□□□□ 0.48
IFT20-211ENST00000580991 TRIM43BA6NCK2 446 aa18.03■□□□□ 0.48
IFT20-211ENST00000580991 SRGAP3O43295 1099 aa18.03■□□□□ 0.48
IFT20-211ENST00000580991 UQCRFS1P1P0C7P4 283 aa18.03■□□□□ 0.48
IFT20-211ENST00000580991 OLFML2BQ68BL8 750 aa18.03■□□□□ 0.48
IFT20-211ENST00000580991 SH3RF1Q7Z6J0 888 aa18.03■□□□□ 0.48
IFT20-211ENST00000580991 TRIM43Q96BQ3 446 aaPredicted RBP18.03■□□□□ 0.48
IFT20-211ENST00000580991 SMC4Q9NTJ3 1288 aa18.03■□□□□ 0.48
IFT20-211ENST00000580991 BTBD7Q9P203 1132 aa18.03■□□□□ 0.48
IFT20-211ENST00000580991 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.03■□□□□ 0.48
IFT20-211ENST00000580991 MYO9BQ13459 2157 aa18.03■□□□□ 0.48
IFT20-211ENST00000580991 E9PSI1 815 aa18.02■□□□□ 0.48
IFT20-211ENST00000580991 SEPT4O43236 478 aa18.02■□□□□ 0.48
IFT20-211ENST00000580991 STRNO43815 780 aa18.02■□□□□ 0.48
IFT20-211ENST00000580991 MYCNP04198 464 aaPredicted RBP18.02■□□□□ 0.48
IFT20-211ENST00000580991 VCAM1P19320 739 aa18.02■□□□□ 0.48
IFT20-211ENST00000580991 ADCYAP1R1P41586 468 aa18.02■□□□□ 0.48
IFT20-211ENST00000580991 KIAA1683Q9H0B3 1180 aa18.02■□□□□ 0.48
IFT20-211ENST00000580991 TACC3Q9Y6A5 838 aa18.02■□□□□ 0.48
IFT20-211ENST00000580991 ADORA2AP29274 412 aa18.01■□□□□ 0.47
IFT20-211ENST00000580991 GRIN2CQ14957 1233 aa18.01■□□□□ 0.47
IFT20-211ENST00000580991 ANO1Q5XXA6 986 aa18.01■□□□□ 0.47
IFT20-211ENST00000580991 FAM9BQ8IZU0 186 aa18.01■□□□□ 0.47
IFT20-211ENST00000580991 USP38Q8NB14 1042 aa18.01■□□□□ 0.47
IFT20-211ENST00000580991 FERMT2Q96AC1 680 aa18.01■□□□□ 0.47
IFT20-211ENST00000580991 MEIS3Q99687 375 aa18.01■□□□□ 0.47
IFT20-211ENST00000580991 SAP30BPQ9UHR5 308 aaKnown RBP18.01■□□□□ 0.47
IFT20-211ENST00000580991 ZNF236Q9UL36 1845 aa18■□□□□ 0.47
IFT20-211ENST00000580991 SPDYE16A6NNV3 312 aaPredicted RBP18■□□□□ 0.47
IFT20-211ENST00000580991 TLE2Q04725 743 aa18■□□□□ 0.47
IFT20-211ENST00000580991 MTX1Q13505 466 aa18■□□□□ 0.47
IFT20-211ENST00000580991 LRRC41Q15345 812 aa18■□□□□ 0.47
IFT20-211ENST00000580991 TATDN1Q6P1N9 297 aa18■□□□□ 0.47
IFT20-211ENST00000580991 ADGRA1Q86SQ6 560 aa18■□□□□ 0.47
IFT20-211ENST00000580991 ANP32CO43423 234 aa17.99■□□□□ 0.47
IFT20-211ENST00000580991 CLTBP09497 229 aa17.99■□□□□ 0.47
IFT20-211ENST00000580991 DNAJB2P25686 324 aa17.99■□□□□ 0.47
IFT20-211ENST00000580991 ITGB8P26012 769 aa17.99■□□□□ 0.47
IFT20-211ENST00000580991 RAB3GAP1Q15042 981 aa17.99■□□□□ 0.47
IFT20-211ENST00000580991 MIER1Q8N108 512 aa17.99■□□□□ 0.47
IFT20-211ENST00000580991 RPAP3Q9H6T3 665 aaPredicted RBP17.99■□□□□ 0.47
IFT20-211ENST00000580991 SLC5A4Q9NY91 659 aa17.99■□□□□ 0.47
IFT20-211ENST00000580991 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.98■□□□□ 0.47
IFT20-211ENST00000580991 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.98■□□□□ 0.47
IFT20-211ENST00000580991 IGSF3O75054 1194 aa17.98■□□□□ 0.47
IFT20-211ENST00000580991 RAG1P15918 1043 aa17.98■□□□□ 0.47
IFT20-211ENST00000580991 EPHB4P54760 987 aa17.98■□□□□ 0.47
IFT20-211ENST00000580991 MOV10L1Q9BXT6 1211 aaKnown RBP17.98■□□□□ 0.47
IFT20-211ENST00000580991 API5Q9BZZ5 524 aaKnown RBP17.98■□□□□ 0.47
IFT20-211ENST00000580991 ZNF576Q9H609 170 aa17.98■□□□□ 0.47
IFT20-211ENST00000580991 SNRKQ9NRH2 765 aa17.98■□□□□ 0.47
IFT20-211ENST00000580991 NOB1Q9ULX3 412 aaKnown RBP17.98■□□□□ 0.47
IFT20-211ENST00000580991 MYH1P12882 1939 aa17.98■□□□□ 0.47
IFT20-211ENST00000580991 KIAA0355O15063 1070 aa17.97■□□□□ 0.47
IFT20-211ENST00000580991 GNAI3P08754 354 aa17.97■□□□□ 0.47
IFT20-211ENST00000580991 FPGSQ05932 587 aa17.97■□□□□ 0.47
IFT20-211ENST00000580991 CERKLQ49MI3 558 aaPredicted RBP17.97■□□□□ 0.47
IFT20-211ENST00000580991 ACER1Q8TDN7 264 aa17.97■□□□□ 0.47
IFT20-211ENST00000580991 ATXN2LQ8WWM7 1075 aaKnown RBP17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms