RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 SYNPO2Q9UMS6 1093 aa16.79■□□□□ 0.28
SKA2-205ENST00000580541 SSC5DA1L4H1 1573 aa16.79■□□□□ 0.28
SKA2-205ENST00000580541 SLURP2P0DP57 97 aa16.78■□□□□ 0.28
SKA2-205ENST00000580541 PTPRAP18433 802 aa16.78■□□□□ 0.28
SKA2-205ENST00000580541 APLP1P51693 650 aa16.78■□□□□ 0.28
SKA2-205ENST00000580541 ICA1Q05084 483 aa16.78■□□□□ 0.28
SKA2-205ENST00000580541 PPATQ06203 517 aa16.78■□□□□ 0.28
SKA2-205ENST00000580541 SEPT2Q15019 361 aa16.78■□□□□ 0.28
SKA2-205ENST00000580541 TMEM67Q5HYA8 995 aa16.78■□□□□ 0.28
SKA2-205ENST00000580541 SYNE3Q6ZMZ3 975 aa16.78■□□□□ 0.28
SKA2-205ENST00000580541 HHIPL1Q96JK4 782 aa16.78■□□□□ 0.28
SKA2-205ENST00000580541 WDR18Q9BV38 432 aa16.78■□□□□ 0.28
SKA2-205ENST00000580541 PDRG1Q9NUG6 133 aa16.78■□□□□ 0.28
SKA2-205ENST00000580541 ABT1Q9ULW3 272 aaKnown RBP16.78■□□□□ 0.28
SKA2-205ENST00000580541 STX8Q9UNK0 236 aa16.78■□□□□ 0.28
SKA2-205ENST00000580541 TACC3Q9Y6A5 838 aa16.78■□□□□ 0.28
SKA2-205ENST00000580541 TAF6LQ9Y6J9 622 aa16.78■□□□□ 0.28
SKA2-205ENST00000580541 C19orf81C9J6K1 198 aa16.77■□□□□ 0.28
SKA2-205ENST00000580541 ST18O60284 1047 aa16.77■□□□□ 0.28
SKA2-205ENST00000580541 LIFRP42702 1097 aa16.77■□□□□ 0.28
SKA2-205ENST00000580541 NEK4P51957 841 aa16.77■□□□□ 0.28
SKA2-205ENST00000580541 EXOSC10Q01780 885 aaKnown RBP16.77■□□□□ 0.28
SKA2-205ENST00000580541 ATP2B2Q01814 1243 aa16.77■□□□□ 0.28
SKA2-205ENST00000580541 WTAPQ15007 396 aa16.77■□□□□ 0.28
SKA2-205ENST00000580541 IFIT1BQ5T764 474 aaKnown RBP16.77■□□□□ 0.28
SKA2-205ENST00000580541 MOB2Q70IA6 237 aa16.77■□□□□ 0.28
SKA2-205ENST00000580541 SAPCD2Q86UD0 394 aa16.77■□□□□ 0.28
SKA2-205ENST00000580541 FBXL16Q8N461 479 aa16.77■□□□□ 0.28
SKA2-205ENST00000580541 ANKS1AQ92625 1134 aa16.77■□□□□ 0.28
SKA2-205ENST00000580541 MKL1Q969V6 931 aa16.77■□□□□ 0.28
SKA2-205ENST00000580541 CCDC102AQ96A19 550 aa16.77■□□□□ 0.28
SKA2-205ENST00000580541 CEP95Q96GE4 821 aa16.77■□□□□ 0.28
SKA2-205ENST00000580541 ALDH8A1Q9H2A2 487 aaPredicted RBP16.77■□□□□ 0.28
SKA2-205ENST00000580541 RNF39Q9H2S5 420 aa16.77■□□□□ 0.28
SKA2-205ENST00000580541 CREBZFQ9NS37 354 aa16.77■□□□□ 0.28
SKA2-205ENST00000580541 CLIP2Q9UDT6 1046 aa16.77■□□□□ 0.28
SKA2-205ENST00000580541 FZD1Q9UP38 647 aa16.77■□□□□ 0.28
SKA2-205ENST00000580541 TLL2Q9Y6L7 1015 aa16.77■□□□□ 0.28
SKA2-205ENST00000580541 ZHX2Q9Y6X8 837 aa16.77■□□□□ 0.28
SKA2-205ENST00000580541 IGKV6D-41A0A0C4DH26 115 aa16.76■□□□□ 0.27
SKA2-205ENST00000580541 TOP1P11387 765 aaKnown RBP16.76■□□□□ 0.27
SKA2-205ENST00000580541 USP14P54578 494 aa16.76■□□□□ 0.27
SKA2-205ENST00000580541 RRP1BQ14684 758 aaKnown RBP16.76■□□□□ 0.27
SKA2-205ENST00000580541 NFXL1Q6ZNB6 911 aa16.76■□□□□ 0.27
SKA2-205ENST00000580541 CYB5R4Q7L1T6 521 aa16.76■□□□□ 0.27
SKA2-205ENST00000580541 ZNF280CQ8ND82 737 aa16.76■□□□□ 0.27
SKA2-205ENST00000580541 KAT14Q9H8E8 782 aa16.76■□□□□ 0.27
SKA2-205ENST00000580541 ELP3Q9H9T3 547 aa16.76■□□□□ 0.27
SKA2-205ENST00000580541 GOPCQ9HD26 462 aa16.76■□□□□ 0.27
SKA2-205ENST00000580541 SNCAIPQ9Y6H5 919 aa16.76■□□□□ 0.27
SKA2-205ENST00000580541 TNKSO95271 1327 aa16.75■□□□□ 0.27
SKA2-205ENST00000580541 CCDC69A6NI79 296 aa16.75■□□□□ 0.27
SKA2-205ENST00000580541 SPDYE5A6NIY4 337 aa16.75■□□□□ 0.27
SKA2-205ENST00000580541 USP17L10C9JJH3 530 aa16.75■□□□□ 0.27
SKA2-205ENST00000580541 CXCL11O14625 94 aa16.75■□□□□ 0.27
SKA2-205ENST00000580541 EEF2P13639 858 aaKnown RBP16.75■□□□□ 0.27
SKA2-205ENST00000580541 ZNF157P51786 506 aaPredicted RBP16.75■□□□□ 0.27
SKA2-205ENST00000580541 PPIL2Q13356 520 aa16.75■□□□□ 0.27
SKA2-205ENST00000580541 RGMBQ6NW40 437 aa16.75■□□□□ 0.27
SKA2-205ENST00000580541 CHST3Q7LGC8 479 aa16.75■□□□□ 0.27
SKA2-205ENST00000580541 IGDCC4Q8TDY8 1250 aa16.75■□□□□ 0.27
SKA2-205ENST00000580541 CHMP4CQ96CF2 233 aa16.75■□□□□ 0.27
SKA2-205ENST00000580541 FEZ1Q99689 392 aa16.75■□□□□ 0.27
SKA2-205ENST00000580541 ZKSCAN3Q9BRR0 538 aa16.75■□□□□ 0.27
SKA2-205ENST00000580541 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.75■□□□□ 0.27
SKA2-205ENST00000580541 UPF3BQ9BZI7 483 aaKnown RBP16.75■□□□□ 0.27
SKA2-205ENST00000580541 IL17RBQ9NRM6 502 aa16.75■□□□□ 0.27
SKA2-205ENST00000580541 CALM1P0DP23 149 aa16.74■□□□□ 0.27
SKA2-205ENST00000580541 CALM2P0DP24 149 aa16.74■□□□□ 0.27
SKA2-205ENST00000580541 CALM3P0DP25 149 aa16.74■□□□□ 0.27
SKA2-205ENST00000580541 ZBTB48P10074 688 aaPredicted RBP16.74■□□□□ 0.27
SKA2-205ENST00000580541 GUCY1A2P33402 732 aa16.74■□□□□ 0.27
SKA2-205ENST00000580541 NOVP48745 357 aa16.74■□□□□ 0.27
SKA2-205ENST00000580541 MCM2P49736 904 aa16.74■□□□□ 0.27
SKA2-205ENST00000580541 SPP2Q13103 211 aa16.74■□□□□ 0.27
SKA2-205ENST00000580541 Q6ZUG5 572 aa16.74■□□□□ 0.27
SKA2-205ENST00000580541 CATIPQ7Z7H3 387 aa16.74■□□□□ 0.27
SKA2-205ENST00000580541 ENAHQ8N8S7 591 aaPredicted RBP16.74■□□□□ 0.27
SKA2-205ENST00000580541 OPTNQ96CV9 577 aa16.74■□□□□ 0.27
SKA2-205ENST00000580541 CLMNQ96JQ2 1002 aa16.74■□□□□ 0.27
SKA2-205ENST00000580541 TMOD4Q9NZQ9 345 aa16.74■□□□□ 0.27
SKA2-205ENST00000580541 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.74■□□□□ 0.27
SKA2-205ENST00000580541 TMX2Q9Y320 296 aa16.74■□□□□ 0.27
SKA2-205ENST00000580541 AFG3L2Q9Y4W6 797 aa16.74■□□□□ 0.27
SKA2-205ENST00000580541 DOCK1Q14185 1865 aa16.73■□□□□ 0.27
SKA2-205ENST00000580541 NMT2O60551 498 aa16.73■□□□□ 0.27
SKA2-205ENST00000580541 BACE1P56817 501 aa16.73■□□□□ 0.27
SKA2-205ENST00000580541 ANTXR2P58335 489 aa16.73■□□□□ 0.27
SKA2-205ENST00000580541 SEC23AQ15436 765 aa16.73■□□□□ 0.27
SKA2-205ENST00000580541 USP17L2Q6R6M4 530 aa16.73■□□□□ 0.27
SKA2-205ENST00000580541 OTUD5Q96G74 571 aa16.73■□□□□ 0.27
SKA2-205ENST00000580541 KIAA1683Q9H0B3 1180 aa16.73■□□□□ 0.27
SKA2-205ENST00000580541 SLC12A7Q9Y666 1083 aa16.73■□□□□ 0.27
SKA2-205ENST00000580541 ATAD5Q96QE3 1844 aa16.73■□□□□ 0.27
SKA2-205ENST00000580541 SH2B2O14492 632 aaPredicted RBP16.72■□□□□ 0.27
SKA2-205ENST00000580541 ECE1P42892 770 aa16.72■□□□□ 0.27
SKA2-205ENST00000580541 GTF2A2P52657 109 aa16.72■□□□□ 0.27
SKA2-205ENST00000580541 JAG1P78504 1218 aa16.72■□□□□ 0.27
SKA2-205ENST00000580541 SNAPC2Q13487 334 aa16.72■□□□□ 0.27
SKA2-205ENST00000580541 PPP2R5BQ15173 497 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms