RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 ZNF652Q9Y2D9 606 aa11.99□□□□□ -0.49
TOP3A-209ENST00000580095 DOT1LQ8TEK3 1739 aa11.99□□□□□ -0.49
TOP3A-209ENST00000580095 ZNF804BA4D1E1 1349 aa11.99□□□□□ -0.49
TOP3A-209ENST00000580095 FAM237AA0A1B0GTK4 181 aa11.99□□□□□ -0.49
TOP3A-209ENST00000580095 VWA3AA6NCI4 1184 aa11.99□□□□□ -0.49
TOP3A-209ENST00000580095 TRIM75PA6NK02 468 aa11.99□□□□□ -0.49
TOP3A-209ENST00000580095 ACTN4O43707 911 aaKnown RBP11.99□□□□□ -0.49
TOP3A-209ENST00000580095 KIF20AO95235 890 aa11.99□□□□□ -0.49
TOP3A-209ENST00000580095 FUT2Q10981 343 aa11.99□□□□□ -0.49
TOP3A-209ENST00000580095 CREBRFQ8IUR6 639 aa11.99□□□□□ -0.49
TOP3A-209ENST00000580095 TMTC2Q8N394 836 aa11.99□□□□□ -0.49
TOP3A-209ENST00000580095 SYMPKQ92797 1274 aaKnown RBP11.99□□□□□ -0.49
TOP3A-209ENST00000580095 BSDC1Q9NW68 430 aaPredicted RBP11.99□□□□□ -0.49
TOP3A-209ENST00000580095 TROAPQ12815 778 aa11.98□□□□□ -0.49
TOP3A-209ENST00000580095 VSTM4Q8IW00 320 aa11.98□□□□□ -0.49
TOP3A-209ENST00000580095 SRBD1Q8N5C6 995 aaKnown RBP11.98□□□□□ -0.49
TOP3A-209ENST00000580095 CPLX3Q8WVH0 158 aa11.98□□□□□ -0.49
TOP3A-209ENST00000580095 BLZF1Q9H2G9 400 aa11.98□□□□□ -0.49
TOP3A-209ENST00000580095 SRPRBQ9Y5M8 271 aaKnown RBP11.98□□□□□ -0.49
TOP3A-209ENST00000580095 USP17L8P0C7I0 530 aa11.98□□□□□ -0.49
TOP3A-209ENST00000580095 ERCC6LQ2NKX8 1250 aa11.98□□□□□ -0.49
TOP3A-209ENST00000580095 IQCA1Q86XH1 822 aa11.98□□□□□ -0.49
TOP3A-209ENST00000580095 NSUN4Q96CB9 384 aaKnown RBP11.98□□□□□ -0.49
TOP3A-209ENST00000580095 DESI2Q9BSY9 194 aa11.98□□□□□ -0.49
TOP3A-209ENST00000580095 KCNG1Q9UIX4 513 aa11.98□□□□□ -0.49
TOP3A-209ENST00000580095 ANKRD36CQ5JPF3 1778 aa11.98□□□□□ -0.49
TOP3A-209ENST00000580095 DDX60Q8IY21 1712 aaKnown RBP11.98□□□□□ -0.49
TOP3A-209ENST00000580095 CD44P16070 742 aaKnown RBP11.97□□□□□ -0.49
TOP3A-209ENST00000580095 KMT5BQ4FZB7 885 aa11.97□□□□□ -0.49
TOP3A-209ENST00000580095 PIK3AP1Q6ZUJ8 805 aa11.97□□□□□ -0.49
TOP3A-209ENST00000580095 RASGRP2Q7LDG7 609 aa11.97□□□□□ -0.49
TOP3A-209ENST00000580095 NBPF5PQ86XG9 351 aaPredicted RBP11.97□□□□□ -0.49
TOP3A-209ENST00000580095 RASGRP4Q8TDF6 673 aa11.97□□□□□ -0.49
TOP3A-209ENST00000580095 DYNLL2Q96FJ2 89 aa11.97□□□□□ -0.49
TOP3A-209ENST00000580095 LRP5O75197 1615 aa11.97□□□□□ -0.49
TOP3A-209ENST00000580095 MCM7P33993 719 aa11.97□□□□□ -0.49
TOP3A-209ENST00000580095 KRT2P35908 639 aa11.97□□□□□ -0.49
TOP3A-209ENST00000580095 RPS8P62241 208 aaKnown RBP11.97□□□□□ -0.49
TOP3A-209ENST00000580095 UBE4AQ14139 1066 aa11.97□□□□□ -0.49
TOP3A-209ENST00000580095 GPKOWQ92917 476 aaPredicted RBP eCLIP11.97□□□□□ -0.49
TOP3A-209ENST00000580095 RNF26Q9BY78 433 aaPredicted RBP11.97□□□□□ -0.49
TOP3A-209ENST00000580095 DCP1AQ9NPI6 582 aaPredicted RBP11.97□□□□□ -0.49
TOP3A-209ENST00000580095 MAPK8IP1Q9UQF2 711 aa11.97□□□□□ -0.49
TOP3A-209ENST00000580095 BCL9LQ86UU0 1499 aa11.97□□□□□ -0.49
TOP3A-209ENST00000580095 GNPATO15228 680 aa11.97□□□□□ -0.49
TOP3A-209ENST00000580095 TEX33O43247 280 aa11.97□□□□□ -0.49
TOP3A-209ENST00000580095 PTGDRQ13258 359 aa11.97□□□□□ -0.49
TOP3A-209ENST00000580095 MTF1Q14872 753 aa11.97□□□□□ -0.49
TOP3A-209ENST00000580095 PHF20Q9BVI0 1012 aa11.97□□□□□ -0.49
TOP3A-209ENST00000580095 MCM9Q9NXL9 1143 aa11.97□□□□□ -0.49
TOP3A-209ENST00000580095 HIBADHP31937 336 aaKnown RBP11.96□□□□□ -0.49
TOP3A-209ENST00000580095 MORC3Q14149 939 aa11.96□□□□□ -0.49
TOP3A-209ENST00000580095 DIXDC1Q155Q3 683 aa11.96□□□□□ -0.49
TOP3A-209ENST00000580095 NPY5RQ15761 445 aa11.96□□□□□ -0.49
TOP3A-209ENST00000580095 GRIK5Q16478 980 aa11.96□□□□□ -0.49
TOP3A-209ENST00000580095 FBXO38Q6PIJ6 1188 aa11.96□□□□□ -0.49
TOP3A-209ENST00000580095 TOGARAM2Q6ZUX3 1019 aa11.96□□□□□ -0.49
TOP3A-209ENST00000580095 ZBTB9Q96C00 473 aa11.96□□□□□ -0.49
TOP3A-209ENST00000580095 EPC1Q9H2F5 836 aa11.96□□□□□ -0.49
TOP3A-209ENST00000580095 CPVLQ9H3G5 476 aa11.96□□□□□ -0.49
TOP3A-209ENST00000580095 SPATA31A5Q5VU36 1347 aa11.96□□□□□ -0.5
TOP3A-209ENST00000580095 SPATA31A7Q8IWB4 1347 aa11.96□□□□□ -0.5
TOP3A-209ENST00000580095 CICQ96RK0 1608 aaPredicted RBP11.96□□□□□ -0.5
TOP3A-209ENST00000580095 A0A0U1RQJ8 604 aa11.96□□□□□ -0.5
TOP3A-209ENST00000580095 TSPY2A6NKD2 308 aa11.96□□□□□ -0.5
TOP3A-209ENST00000580095 SF3B3Q15393 1217 aaKnown RBP11.96□□□□□ -0.5
TOP3A-209ENST00000580095 SLC44A5Q8NCS7 719 aa11.96□□□□□ -0.5
TOP3A-209ENST00000580095 ATRIPQ8WXE1 791 aa11.96□□□□□ -0.5
TOP3A-209ENST00000580095 HOOK1Q9UJC3 728 aaKnown RBP11.96□□□□□ -0.5
TOP3A-209ENST00000580095 ANAPC4Q9UJX5 808 aa11.96□□□□□ -0.5
TOP3A-209ENST00000580095 COL14A1Q05707 1796 aaKnown RBP11.95□□□□□ -0.5
TOP3A-209ENST00000580095 BAZ2AQ9UIF9 1905 aaKnown RBP11.95□□□□□ -0.5
TOP3A-209ENST00000580095 CBFA2T2O43439 604 aa11.95□□□□□ -0.5
TOP3A-209ENST00000580095 SLU7O95391 586 aaKnown RBP11.95□□□□□ -0.5
TOP3A-209ENST00000580095 SARSP49591 514 aaKnown RBP11.95□□□□□ -0.5
TOP3A-209ENST00000580095 NLRP5P59047 1200 aa11.95□□□□□ -0.5
TOP3A-209ENST00000580095 PAGE5Q96GU1 130 aa11.95□□□□□ -0.5
TOP3A-209ENST00000580095 C8orf37Q96NL8 207 aa11.95□□□□□ -0.5
TOP3A-209ENST00000580095 SETDB2Q96T68 719 aa11.95□□□□□ -0.5
TOP3A-209ENST00000580095 PLIN2Q99541 437 aa11.95□□□□□ -0.5
TOP3A-209ENST00000580095 RTL9Q8NET4 1388 aa11.95□□□□□ -0.5
TOP3A-209ENST00000580095 NRDCO43847 1150 aa11.95□□□□□ -0.5
TOP3A-209ENST00000580095 URI1O94763 535 aaPredicted RBP11.95□□□□□ -0.5
TOP3A-209ENST00000580095 XBP1P17861 261 aa11.95□□□□□ -0.5
TOP3A-209ENST00000580095 KARSQ15046 597 aaKnown RBP11.95□□□□□ -0.5
TOP3A-209ENST00000580095 TMTC3Q6ZXV5 915 aa11.95□□□□□ -0.5
TOP3A-209ENST00000580095 FBXO33Q7Z6M2 555 aa11.95□□□□□ -0.5
TOP3A-209ENST00000580095 STAG2Q8N3U4 1231 aa11.95□□□□□ -0.5
TOP3A-209ENST00000580095 NLRP3Q96P20 1036 aa11.95□□□□□ -0.5
TOP3A-209ENST00000580095 IRX2Q9BZI1 471 aaPredicted RBP11.95□□□□□ -0.5
TOP3A-209ENST00000580095 ECM29Q5VYK3 1845 aa11.95□□□□□ -0.5
TOP3A-209ENST00000580095 MYH2Q9UKX2 1941 aa11.94□□□□□ -0.5
TOP3A-209ENST00000580095 USP17L3A6NCW0 530 aa11.94□□□□□ -0.5
TOP3A-209ENST00000580095 USP17L4A6NCW7 530 aa11.94□□□□□ -0.5
TOP3A-209ENST00000580095 PRPF3O43395 683 aaKnown RBP11.94□□□□□ -0.5
TOP3A-209ENST00000580095 DPYDQ12882 1025 aa11.94□□□□□ -0.5
TOP3A-209ENST00000580095 TTC38Q5R3I4 469 aa11.94□□□□□ -0.5
TOP3A-209ENST00000580095 USP17L1Q7RTZ2 530 aa11.94□□□□□ -0.5
TOP3A-209ENST00000580095 TMEM139Q8IV31 216 aa11.94□□□□□ -0.5
TOP3A-209ENST00000580095 CTCFLQ8NI51 663 aaPredicted RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms