RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 USP17L20D6RJB6 530 aa16.22■□□□□ 0.19
TRAF4-214ENST00000580073 BMP8BP34820 402 aa16.22■□□□□ 0.19
TRAF4-214ENST00000580073 USP17L24Q0WX57 530 aa16.22■□□□□ 0.19
TRAF4-214ENST00000580073 TATDN1Q6P1N9 297 aa16.22■□□□□ 0.19
TRAF4-214ENST00000580073 GPR142Q7Z601 462 aa16.22■□□□□ 0.19
TRAF4-214ENST00000580073 DIS3LQ8TF46 1054 aaKnown RBP16.22■□□□□ 0.19
TRAF4-214ENST00000580073 ZBTB40Q9NUA8 1239 aa16.22■□□□□ 0.19
TRAF4-214ENST00000580073 RABGAP1Q9Y3P9 1069 aa16.22■□□□□ 0.19
TRAF4-214ENST00000580073 IVNS1ABPQ9Y6Y0 642 aa16.22■□□□□ 0.19
TRAF4-214ENST00000580073 RAB3GAP1Q15042 981 aa16.21■□□□□ 0.19
TRAF4-214ENST00000580073 ABCB5Q2M3G0 1257 aa16.21■□□□□ 0.19
TRAF4-214ENST00000580073 CERKLQ49MI3 558 aaPredicted RBP16.21■□□□□ 0.19
TRAF4-214ENST00000580073 AACSQ86V21 672 aa16.21■□□□□ 0.19
TRAF4-214ENST00000580073 MIGA1Q8NAN2 632 aa16.21■□□□□ 0.19
TRAF4-214ENST00000580073 CCDC8Q9H0W5 538 aaPredicted RBP16.21■□□□□ 0.19
TRAF4-214ENST00000580073 TXNRD2Q9NNW7 524 aa16.21■□□□□ 0.19
TRAF4-214ENST00000580073 MSCO60682 206 aa16.2■□□□□ 0.18
TRAF4-214ENST00000580073 DYNLL1P63167 89 aaKnown RBP16.2■□□□□ 0.18
TRAF4-214ENST00000580073 MFSD14CQ5VZR4 134 aa16.2■□□□□ 0.18
TRAF4-214ENST00000580073 GPR153Q6NV75 609 aa16.2■□□□□ 0.18
TRAF4-214ENST00000580073 CEP85Q6P2H3 762 aa16.2■□□□□ 0.18
TRAF4-214ENST00000580073 EAF2Q96CJ1 260 aaPredicted RBP16.2■□□□□ 0.18
TRAF4-214ENST00000580073 CRBNQ96SW2 442 aa16.2■□□□□ 0.18
TRAF4-214ENST00000580073 CRNKL1Q9BZJ0 848 aaKnown RBP16.2■□□□□ 0.18
TRAF4-214ENST00000580073 KIAA1683Q9H0B3 1180 aa16.2■□□□□ 0.18
TRAF4-214ENST00000580073 EMILIN3Q9NT22 766 aa16.2■□□□□ 0.18
TRAF4-214ENST00000580073 TLR7Q9NYK1 1049 aaKnown RBP16.2■□□□□ 0.18
TRAF4-214ENST00000580073 PLXNA1Q9UIW2 1896 aa16.2■□□□□ 0.18
TRAF4-214ENST00000580073 COL11A1P12107 1806 aaPredicted RBP16.19■□□□□ 0.18
TRAF4-214ENST00000580073 ZNFX1Q9P2E3 1918 aaKnown RBP16.19■□□□□ 0.18
TRAF4-214ENST00000580073 HMMRO75330 724 aa16.19■□□□□ 0.18
TRAF4-214ENST00000580073 POLR3DP05423 398 aaPredicted RBP16.19■□□□□ 0.18
TRAF4-214ENST00000580073 TRIM32Q13049 653 aa16.19■□□□□ 0.18
TRAF4-214ENST00000580073 MAP2K5Q13163 448 aa16.19■□□□□ 0.18
TRAF4-214ENST00000580073 ZYXQ15942 572 aaKnown RBP16.19■□□□□ 0.18
TRAF4-214ENST00000580073 MORN1Q5T089 497 aa16.19■□□□□ 0.18
TRAF4-214ENST00000580073 LBX2Q6XYB7 198 aa16.19■□□□□ 0.18
TRAF4-214ENST00000580073 RBPJLQ9UBG7 517 aa16.19■□□□□ 0.18
TRAF4-214ENST00000580073 DDX19BQ9UMR2 479 aa16.19■□□□□ 0.18
TRAF4-214ENST00000580073 RANBP2P49792 3224 aaKnown RBP16.19■□□□□ 0.18
TRAF4-214ENST00000580073 RLFQ13129 1914 aa16.18■□□□□ 0.18
TRAF4-214ENST00000580073 MAGEB6P1A0A0J9YX57 407 aa16.18■□□□□ 0.18
TRAF4-214ENST00000580073 SLC15A5A6NIM6 579 aa16.18■□□□□ 0.18
TRAF4-214ENST00000580073 VCAM1P19320 739 aa16.18■□□□□ 0.18
TRAF4-214ENST00000580073 WDR78Q5VTH9 848 aa16.18■□□□□ 0.18
TRAF4-214ENST00000580073 SIRT2Q8IXJ6 389 aa16.18■□□□□ 0.18
TRAF4-214ENST00000580073 AMOTL1Q8IY63 956 aa16.18■□□□□ 0.18
TRAF4-214ENST00000580073 CLASRPQ8N2M8 674 aaKnown RBP16.18■□□□□ 0.18
TRAF4-214ENST00000580073 USP6NLQ92738 828 aa16.18■□□□□ 0.18
TRAF4-214ENST00000580073 GDF15Q99988 308 aa16.18■□□□□ 0.18
TRAF4-214ENST00000580073 PORCNQ9H237 461 aa16.18■□□□□ 0.18
TRAF4-214ENST00000580073 CHMP4BQ9H444 224 aaKnown RBP16.18■□□□□ 0.18
TRAF4-214ENST00000580073 SH2D4AQ9H788 454 aa16.18■□□□□ 0.18
TRAF4-214ENST00000580073 STAP2Q9UGK3 403 aa16.18■□□□□ 0.18
TRAF4-214ENST00000580073 LTBP2Q14767 1821 aa16.17■□□□□ 0.18
TRAF4-214ENST00000580073 JAG1P78504 1218 aa16.17■□□□□ 0.18
TRAF4-214ENST00000580073 CACNB2Q08289 660 aaPredicted RBP16.17■□□□□ 0.18
TRAF4-214ENST00000580073 CATSPERGQ6ZRH7 1159 aa16.17■□□□□ 0.18
TRAF4-214ENST00000580073 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.17■□□□□ 0.18
TRAF4-214ENST00000580073 KIF1BPQ96EK5 621 aa16.17■□□□□ 0.18
TRAF4-214ENST00000580073 EDC3Q96F86 508 aaKnown RBP16.17■□□□□ 0.18
TRAF4-214ENST00000580073 ZMYND8Q9ULU4 1186 aaPredicted RBP16.17■□□□□ 0.18
TRAF4-214ENST00000580073 EXOC6BQ9Y2D4 811 aa16.17■□□□□ 0.18
TRAF4-214ENST00000580073 TDHQ8IZJ6 230 aa16.16■□□□□ 0.18
TRAF4-214ENST00000580073 DDRGK1Q96HY6 314 aa16.16■□□□□ 0.18
TRAF4-214ENST00000580073 RIOK1Q9BRS2 568 aaKnown RBP16.16■□□□□ 0.18
TRAF4-214ENST00000580073 SLC5A4Q9NY91 659 aa16.16■□□□□ 0.18
TRAF4-214ENST00000580073 SWAP70Q9UH65 585 aa16.16■□□□□ 0.18
TRAF4-214ENST00000580073 PFASO15067 1338 aa16.16■□□□□ 0.18
TRAF4-214ENST00000580073 SZT2Q5T011 3432 aa16.16■□□□□ 0.18
TRAF4-214ENST00000580073 IFIT2P09913 472 aaKnown RBP16.15■□□□□ 0.18
TRAF4-214ENST00000580073 PTPREP23469 700 aa16.15■□□□□ 0.18
TRAF4-214ENST00000580073 IRX6P78412 446 aaPredicted RBP16.15■□□□□ 0.18
TRAF4-214ENST00000580073 ATP2B2Q01814 1243 aa16.15■□□□□ 0.18
TRAF4-214ENST00000580073 GRB14Q14449 540 aa16.15■□□□□ 0.18
TRAF4-214ENST00000580073 SHROOM1Q2M3G4 852 aaPredicted RBP16.15■□□□□ 0.18
TRAF4-214ENST00000580073 Q3C1V9 767 aa16.15■□□□□ 0.18
TRAF4-214ENST00000580073 SLC9C2Q5TAH2 1124 aa16.15■□□□□ 0.18
TRAF4-214ENST00000580073 MB21D1Q8N884 522 aa16.15■□□□□ 0.18
TRAF4-214ENST00000580073 RHPN1Q8TCX5 695 aa16.15■□□□□ 0.18
TRAF4-214ENST00000580073 RPAP3Q9H6T3 665 aaPredicted RBP16.15■□□□□ 0.18
TRAF4-214ENST00000580073 MCM9Q9NXL9 1143 aa16.15■□□□□ 0.18
TRAF4-214ENST00000580073 MYH4Q9Y623 1939 aa16.14■□□□□ 0.17
TRAF4-214ENST00000580073 SPDYE16A6NNV3 312 aaPredicted RBP16.14■□□□□ 0.17
TRAF4-214ENST00000580073 MPHOSPH10O00566 681 aaKnown RBP16.14■□□□□ 0.17
TRAF4-214ENST00000580073 HOXC6P09630 235 aa16.14■□□□□ 0.17
TRAF4-214ENST00000580073 COL6A1P12109 1028 aa16.14■□□□□ 0.17
TRAF4-214ENST00000580073 PDE6AP16499 860 aa16.14■□□□□ 0.17
TRAF4-214ENST00000580073 SHMT1P34896 483 aa16.14■□□□□ 0.17
TRAF4-214ENST00000580073 MAGEA10P43363 369 aaPredicted RBP16.14■□□□□ 0.17
TRAF4-214ENST00000580073 MNX1P50219 401 aaPredicted RBP16.14■□□□□ 0.17
TRAF4-214ENST00000580073 LRIT3Q3SXY7 679 aa16.14■□□□□ 0.17
TRAF4-214ENST00000580073 TMEM179Q6ZVK1 233 aa16.14■□□□□ 0.17
TRAF4-214ENST00000580073 RPAP2Q8IXW5 612 aaPredicted RBP16.14■□□□□ 0.17
TRAF4-214ENST00000580073 LPAR1Q92633 364 aa16.14■□□□□ 0.17
TRAF4-214ENST00000580073 TANGO6Q9C0B7 1094 aa16.14■□□□□ 0.17
TRAF4-214ENST00000580073 UBE2OQ9C0C9 1292 aaKnown RBP16.14■□□□□ 0.17
TRAF4-214ENST00000580073 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.14■□□□□ 0.17
TRAF4-214ENST00000580073 ANTXR1Q9H6X2 564 aa16.14■□□□□ 0.17
TRAF4-214ENST00000580073 ARHGEF10LQ9HCE6 1279 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms