RNA–Protein interactions for RNA: ENST00000580044.5

CDH8-206, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-206ENST00000580044 FKBP5Q13451 457 aaPredicted RBP6.33□□□□□ -1.4
CDH8-206ENST00000580044 PERM1Q5SV97 790 aa6.33□□□□□ -1.4
CDH8-206ENST00000580044 CMTR1Q8N1G2 835 aaKnown RBP6.33□□□□□ -1.4
CDH8-206ENST00000580044 SSH3Q8TE77 659 aa6.33□□□□□ -1.4
CDH8-206ENST00000580044 IFT43Q96FT9 208 aa6.33□□□□□ -1.4
CDH8-206ENST00000580044 GPATCH3Q96I76 525 aa6.33□□□□□ -1.4
CDH8-206ENST00000580044 SPACA7Q96KW9 195 aa6.33□□□□□ -1.4
CDH8-206ENST00000580044 ZSCAN31Q96LW9 406 aaPredicted RBP6.33□□□□□ -1.4
CDH8-206ENST00000580044 LPIN3Q9BQK8 851 aa6.33□□□□□ -1.4
CDH8-206ENST00000580044 MRPL18Q9H0U6 180 aaKnown RBP6.33□□□□□ -1.4
CDH8-206ENST00000580044 AKTIPQ9H8T0 292 aa6.33□□□□□ -1.4
CDH8-206ENST00000580044 NAGPAQ9UK23 515 aa6.33□□□□□ -1.4
CDH8-206ENST00000580044 EXOC6BQ9Y2D4 811 aa6.33□□□□□ -1.4
CDH8-206ENST00000580044 LMTK3Q96Q04 1460 aa6.33□□□□□ -1.4
CDH8-206ENST00000580044 NCAPD2Q15021 1401 aa6.33□□□□□ -1.4
CDH8-206ENST00000580044 RPAP1Q9BWH6 1393 aaPredicted RBP6.32□□□□□ -1.4
CDH8-206ENST00000580044 NWD1Q149M9 1564 aa6.32□□□□□ -1.4
CDH8-206ENST00000580044 GNAT3A8MTJ3 354 aa6.32□□□□□ -1.4
CDH8-206ENST00000580044 GOLGA6L6A8MZA4 724 aa6.32□□□□□ -1.4
CDH8-206ENST00000580044 HIP1O00291 1037 aa6.32□□□□□ -1.4
CDH8-206ENST00000580044 HYAL3O43820 417 aaPredicted RBP6.32□□□□□ -1.4
CDH8-206ENST00000580044 XYLBO75191 536 aa6.32□□□□□ -1.4
CDH8-206ENST00000580044 DKK1O94907 266 aa6.32□□□□□ -1.4
CDH8-206ENST00000580044 ZSCAN22P10073 491 aaPredicted RBP6.32□□□□□ -1.4
CDH8-206ENST00000580044 FBLN1P23142 703 aa6.32□□□□□ -1.4
CDH8-206ENST00000580044 MTHFSDQ2M296 383 aaKnown RBP6.32□□□□□ -1.4
CDH8-206ENST00000580044 CRTC2Q53ET0 693 aaPredicted RBP6.32□□□□□ -1.4
CDH8-206ENST00000580044 ERC1Q8IUD2 1116 aa6.32□□□□□ -1.4
CDH8-206ENST00000580044 RILPL2Q969X0 211 aa6.32□□□□□ -1.4
CDH8-206ENST00000580044 KIF1BPQ96EK5 621 aa6.32□□□□□ -1.4
CDH8-206ENST00000580044 SH2B1Q9NRF2 756 aaPredicted RBP6.32□□□□□ -1.4
CDH8-206ENST00000580044 PCMTD2Q9NV79 361 aa6.32□□□□□ -1.4
CDH8-206ENST00000580044 TLR7Q9NYK1 1049 aaKnown RBP6.32□□□□□ -1.4
CDH8-206ENST00000580044 DMGDHQ9UI17 866 aaKnown RBP6.32□□□□□ -1.4
CDH8-206ENST00000580044 RNF112Q9ULX5 631 aa6.32□□□□□ -1.4
CDH8-206ENST00000580044 LIMCH1Q9UPQ0 1083 aa6.32□□□□□ -1.4
CDH8-206ENST00000580044 RTCBQ9Y3I0 505 aaKnown RBP6.32□□□□□ -1.4
CDH8-206ENST00000580044 R3HCC1Q9Y3T6 440 aaKnown RBP6.32□□□□□ -1.4
CDH8-206ENST00000580044 MYH15Q9Y2K3 1946 aa6.32□□□□□ -1.4
CDH8-206ENST00000580044 CCDC171Q6TFL3 1326 aa6.31□□□□□ -1.4
CDH8-206ENST00000580044 ARHGAP23Q9P227 1491 aa6.31□□□□□ -1.4
CDH8-206ENST00000580044 LOC102724428A0A0B4J2F2 783 aa6.31□□□□□ -1.4
CDH8-206ENST00000580044 GSC2O15499 205 aa6.31□□□□□ -1.4
CDH8-206ENST00000580044 SGSM2O43147 1006 aa6.31□□□□□ -1.4
CDH8-206ENST00000580044 PDCP20941 246 aa6.31□□□□□ -1.4
CDH8-206ENST00000580044 AMPHP49418 695 aa6.31□□□□□ -1.4
CDH8-206ENST00000580044 SIK1P57059 783 aa6.31□□□□□ -1.4
CDH8-206ENST00000580044 CHAF1AQ13111 956 aaPredicted RBP6.31□□□□□ -1.4
CDH8-206ENST00000580044 KRT24Q2M2I5 525 aa6.31□□□□□ -1.4
CDH8-206ENST00000580044 HSP90AB2PQ58FF8 381 aa6.31□□□□□ -1.4
CDH8-206ENST00000580044 GDF6Q6KF10 455 aaPredicted RBP6.31□□□□□ -1.4
CDH8-206ENST00000580044 HFE2Q6ZVN8 426 aa6.31□□□□□ -1.4
CDH8-206ENST00000580044 RGL4Q8IZJ4 473 aa6.31□□□□□ -1.4
CDH8-206ENST00000580044 PIBF1Q8WXW3 757 aa6.31□□□□□ -1.4
CDH8-206ENST00000580044 PKNOX2Q96KN3 472 aa6.31□□□□□ -1.4
CDH8-206ENST00000580044 TM6SF1Q9BZW5 370 aa6.31□□□□□ -1.4
CDH8-206ENST00000580044 USP25Q9UHP3 1055 aa6.31□□□□□ -1.4
CDH8-206ENST00000580044 SIPA1L3O60292 1781 aaPredicted RBP6.31□□□□□ -1.4
CDH8-206ENST00000580044 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.3□□□□□ -1.4
CDH8-206ENST00000580044 STX6O43752 255 aa6.3□□□□□ -1.4
CDH8-206ENST00000580044 LGR5O75473 907 aa6.3□□□□□ -1.4
CDH8-206ENST00000580044 GLRX3O76003 335 aaKnown RBP6.3□□□□□ -1.4
CDH8-206ENST00000580044 GTF2F1P35269 517 aaKnown RBP eCLIP6.3□□□□□ -1.4
CDH8-206ENST00000580044 XPCQ01831 940 aaPredicted RBP6.3□□□□□ -1.4
CDH8-206ENST00000580044 FAM69CQ0P6D2 419 aa6.3□□□□□ -1.4
CDH8-206ENST00000580044 ANKRD1Q15327 319 aa6.3□□□□□ -1.4
CDH8-206ENST00000580044 TAF7Q15545 349 aaPredicted RBP6.3□□□□□ -1.4
CDH8-206ENST00000580044 FOXD4L6Q3SYB3 417 aaPredicted RBP6.3□□□□□ -1.4
CDH8-206ENST00000580044 VPS53Q5VIR6 699 aa6.3□□□□□ -1.4
CDH8-206ENST00000580044 FOXD4L3Q6VB84 417 aaPredicted RBP6.3□□□□□ -1.4
CDH8-206ENST00000580044 G2E3Q7L622 706 aa6.3□□□□□ -1.4
CDH8-206ENST00000580044 IL22RA1Q8N6P7 574 aa6.3□□□□□ -1.4
CDH8-206ENST00000580044 MYRIPQ8NFW9 859 aa6.3□□□□□ -1.4
CDH8-206ENST00000580044 PLD4Q96BZ4 506 aa6.3□□□□□ -1.4
CDH8-206ENST00000580044 MYO19Q96H55 970 aa6.3□□□□□ -1.4
CDH8-206ENST00000580044 DIAPH3Q9NSV4 1193 aa6.3□□□□□ -1.4
CDH8-206ENST00000580044 ZFATQ9P243 1243 aa6.3□□□□□ -1.4
CDH8-206ENST00000580044 PALD1Q9ULE6 856 aa6.3□□□□□ -1.4
CDH8-206ENST00000580044 SMC3Q9UQE7 1217 aa6.3□□□□□ -1.4
CDH8-206ENST00000580044 BCS1LQ9Y276 419 aa6.3□□□□□ -1.4
CDH8-206ENST00000580044 FNDC3AQ9Y2H6 1198 aaKnown RBP6.3□□□□□ -1.4
CDH8-206ENST00000580044 LRRFIP2Q9Y608 721 aaKnown RBP6.3□□□□□ -1.4
CDH8-206ENST00000580044 EID1Q9Y6B2 187 aa6.3□□□□□ -1.4
CDH8-206ENST00000580044 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.3□□□□□ -1.4
CDH8-206ENST00000580044 FER1L4A9Z1Z3 1794 aa6.3□□□□□ -1.4
CDH8-206ENST00000580044 CAMTA1Q9Y6Y1 1673 aa6.3□□□□□ -1.4
CDH8-206ENST00000580044 ELP1O95163 1332 aa6.29□□□□□ -1.4
CDH8-206ENST00000580044 PNMA6EA0A0J9YXQ4 647 aa6.29□□□□□ -1.4
CDH8-206ENST00000580044 F6X3S4 739 aa6.29□□□□□ -1.4
CDH8-206ENST00000580044 CAVIN2O95810 425 aa6.29□□□□□ -1.4
CDH8-206ENST00000580044 F13A1P00488 732 aa6.29□□□□□ -1.4
CDH8-206ENST00000580044 CCDC192P0DO97 292 aa6.29□□□□□ -1.4
CDH8-206ENST00000580044 ZKSCAN1P17029 563 aaPredicted RBP6.29□□□□□ -1.4
CDH8-206ENST00000580044 BRD2P25440 801 aaKnown RBP6.29□□□□□ -1.4
CDH8-206ENST00000580044 PSMA5P28066 241 aa6.29□□□□□ -1.4
CDH8-206ENST00000580044 NOS3P29474 1203 aa6.29□□□□□ -1.4
CDH8-206ENST00000580044 MTX1Q13505 466 aa6.29□□□□□ -1.4
CDH8-206ENST00000580044 DNTTIP2Q5QJE6 756 aaKnown RBP6.29□□□□□ -1.4
CDH8-206ENST00000580044 FAM117BQ6P1L5 589 aa6.29□□□□□ -1.4
CDH8-206ENST00000580044 PRR23CQ6ZRP0 262 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms