RNA–Protein interactions for RNA: ENST00000579743.2

GGA3-208, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-208ENST00000579743 H0YGN5 161 aa16.55■□□□□ 0.24
GGA3-208ENST00000579743 XRCC5P13010 732 aaKnown RBP16.55■□□□□ 0.24
GGA3-208ENST00000579743 ERVK-9P63128 1117 aa16.55■□□□□ 0.24
GGA3-208ENST00000579743 ERVK-24P63145 666 aa16.55■□□□□ 0.24
GGA3-208ENST00000579743 GPATCH3Q96I76 525 aa16.55■□□□□ 0.24
GGA3-208ENST00000579743 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.55■□□□□ 0.24
GGA3-208ENST00000579743 BOLA2Q9H3K6 86 aa16.55■□□□□ 0.24
GGA3-208ENST00000579743 PAK6Q9NQU5 681 aaPredicted RBP16.55■□□□□ 0.24
GGA3-208ENST00000579743 ATP8A2Q9NTI2 1148 aa16.55■□□□□ 0.24
GGA3-208ENST00000579743 GJD2Q9UKL4 321 aa16.55■□□□□ 0.24
GGA3-208ENST00000579743 RABGAP1Q9Y3P9 1069 aa16.55■□□□□ 0.24
GGA3-208ENST00000579743 EVI5O60447 810 aa16.54■□□□□ 0.24
GGA3-208ENST00000579743 CYP2B6P20813 491 aa16.54■□□□□ 0.24
GGA3-208ENST00000579743 RGS2P41220 211 aa16.54■□□□□ 0.24
GGA3-208ENST00000579743 PLCD1P51178 756 aa16.54■□□□□ 0.24
GGA3-208ENST00000579743 PLEKHH3Q7Z736 793 aa16.54■□□□□ 0.24
GGA3-208ENST00000579743 SIRT2Q8IXJ6 389 aa16.54■□□□□ 0.24
GGA3-208ENST00000579743 ANKLE1Q8NAG6 615 aa16.54■□□□□ 0.24
GGA3-208ENST00000579743 SH2D4AQ9H788 454 aa16.54■□□□□ 0.24
GGA3-208ENST00000579743 RBPJLQ9UBG7 517 aa16.54■□□□□ 0.24
GGA3-208ENST00000579743 HTTP42858 3142 aa16.53■□□□□ 0.24
GGA3-208ENST00000579743 ZKSCAN1P17029 563 aaPredicted RBP16.53■□□□□ 0.24
GGA3-208ENST00000579743 NECAB2Q7Z6G3 386 aa16.53■□□□□ 0.24
GGA3-208ENST00000579743 HAUS7Q99871 368 aa16.53■□□□□ 0.24
GGA3-208ENST00000579743 HOXC10Q9NYD6 342 aa16.53■□□□□ 0.24
GGA3-208ENST00000579743 IVNS1ABPQ9Y6Y0 642 aa16.53■□□□□ 0.24
GGA3-208ENST00000579743 VCAM1P19320 739 aa16.52■□□□□ 0.24
GGA3-208ENST00000579743 SHMT1P34896 483 aa16.52■□□□□ 0.24
GGA3-208ENST00000579743 ADD2P35612 726 aa16.52■□□□□ 0.24
GGA3-208ENST00000579743 SHROOM1Q2M3G4 852 aaPredicted RBP16.52■□□□□ 0.24
GGA3-208ENST00000579743 WDR78Q5VTH9 848 aa16.52■□□□□ 0.24
GGA3-208ENST00000579743 CATSPERGQ6ZRH7 1159 aa16.52■□□□□ 0.24
GGA3-208ENST00000579743 TMEM179Q6ZVK1 233 aa16.52■□□□□ 0.24
GGA3-208ENST00000579743 GPR142Q7Z601 462 aa16.52■□□□□ 0.24
GGA3-208ENST00000579743 UBE2Q1Q7Z7E8 422 aa16.52■□□□□ 0.24
GGA3-208ENST00000579743 LCORLQ8N3X6 602 aa16.52■□□□□ 0.24
GGA3-208ENST00000579743 CCDC17Q96LX7 622 aa16.52■□□□□ 0.24
GGA3-208ENST00000579743 ARMT1Q9H993 441 aa16.52■□□□□ 0.24
GGA3-208ENST00000579743 ARHGEF10LQ9HCE6 1279 aa16.52■□□□□ 0.24
GGA3-208ENST00000579743 TXNRD2Q9NNW7 524 aa16.52■□□□□ 0.24
GGA3-208ENST00000579743 DCP1AQ9NPI6 582 aaPredicted RBP16.52■□□□□ 0.24
GGA3-208ENST00000579743 COLQQ9Y215 455 aaPredicted RBP16.52■□□□□ 0.24
GGA3-208ENST00000579743 TCRBV5S4A2TA0A5A2 114 aa16.51■□□□□ 0.23
GGA3-208ENST00000579743 GABPAQ06546 454 aa16.51■□□□□ 0.23
GGA3-208ENST00000579743 SEPT2Q15019 361 aa16.51■□□□□ 0.23
GGA3-208ENST00000579743 UBE3CQ15386 1083 aa16.51■□□□□ 0.23
GGA3-208ENST00000579743 LRRFIP1Q32MZ4 808 aaKnown RBP16.51■□□□□ 0.23
GGA3-208ENST00000579743 SDR42E1Q8WUS8 393 aa16.51■□□□□ 0.23
GGA3-208ENST00000579743 CRISPLD2Q9H0B8 497 aa16.51■□□□□ 0.23
GGA3-208ENST00000579743 DOCK3Q8IZD9 2030 aa16.5■□□□□ 0.23
GGA3-208ENST00000579743 MBD4O95243 580 aa16.5■□□□□ 0.23
GGA3-208ENST00000579743 COG2Q14746 738 aa16.5■□□□□ 0.23
GGA3-208ENST00000579743 LBX2Q6XYB7 198 aa16.5■□□□□ 0.23
GGA3-208ENST00000579743 APBA2Q99767 749 aa16.5■□□□□ 0.23
GGA3-208ENST00000579743 RPAP3Q9H6T3 665 aaPredicted RBP16.5■□□□□ 0.23
GGA3-208ENST00000579743 SLC15A5A6NIM6 579 aa16.49■□□□□ 0.23
GGA3-208ENST00000579743 PRKAR2AP13861 404 aaKnown RBP16.49■□□□□ 0.23
GGA3-208ENST00000579743 MAP2K5Q13163 448 aa16.49■□□□□ 0.23
GGA3-208ENST00000579743 Q3C1V9 767 aa16.49■□□□□ 0.23
GGA3-208ENST00000579743 MFSD14CQ5VZR4 134 aa16.49■□□□□ 0.23
GGA3-208ENST00000579743 CHRDL2Q6WN34 429 aa16.49■□□□□ 0.23
GGA3-208ENST00000579743 NAV1Q8NEY1 1877 aa16.49■□□□□ 0.23
GGA3-208ENST00000579743 ACER1Q8TDN7 264 aa16.49■□□□□ 0.23
GGA3-208ENST00000579743 TRIB2Q92519 343 aa16.49■□□□□ 0.23
GGA3-208ENST00000579743 LPAR1Q92633 364 aa16.49■□□□□ 0.23
GGA3-208ENST00000579743 EDC3Q96F86 508 aaKnown RBP16.49■□□□□ 0.23
GGA3-208ENST00000579743 PAWRQ96IZ0 340 aaKnown RBP16.49■□□□□ 0.23
GGA3-208ENST00000579743 TANGO6Q9C0B7 1094 aa16.49■□□□□ 0.23
GGA3-208ENST00000579743 NBPF3Q9H094 633 aa16.49■□□□□ 0.23
GGA3-208ENST00000579743 ECHDC1Q9NTX5 307 aa16.49■□□□□ 0.23
GGA3-208ENST00000579743 SLC4A4Q9Y6R1 1079 aa16.49■□□□□ 0.23
GGA3-208ENST00000579743 MB21D1Q8N884 522 aa16.48■□□□□ 0.23
GGA3-208ENST00000579743 PORCNQ9H237 461 aa16.48■□□□□ 0.23
GGA3-208ENST00000579743 SLC5A4Q9NY91 659 aa16.48■□□□□ 0.23
GGA3-208ENST00000579743 ZBTB47Q9UFB7 747 aaPredicted RBP16.48■□□□□ 0.23
GGA3-208ENST00000579743 STRNO43815 780 aa16.47■□□□□ 0.23
GGA3-208ENST00000579743 ATP2B2Q01814 1243 aa16.47■□□□□ 0.23
GGA3-208ENST00000579743 ICA1Q05084 483 aa16.47■□□□□ 0.23
GGA3-208ENST00000579743 MORN1Q5T089 497 aa16.47■□□□□ 0.23
GGA3-208ENST00000579743 ARPP21Q9UBL0 812 aaPredicted RBP16.47■□□□□ 0.23
GGA3-208ENST00000579743 CENPFP49454 3210 aa16.47■□□□□ 0.23
GGA3-208ENST00000579743 USP17L12C9JPN9 530 aa16.46■□□□□ 0.23
GGA3-208ENST00000579743 USP17L21D6R901 530 aa16.46■□□□□ 0.23
GGA3-208ENST00000579743 PEX10O60683 326 aa16.46■□□□□ 0.23
GGA3-208ENST00000579743 ZFYP08048 801 aaPredicted RBP16.46■□□□□ 0.23
GGA3-208ENST00000579743 PTPREP23469 700 aa16.46■□□□□ 0.23
GGA3-208ENST00000579743 GUCY1A2P33402 732 aa16.46■□□□□ 0.23
GGA3-208ENST00000579743 CDK8P49336 464 aa16.46■□□□□ 0.23
GGA3-208ENST00000579743 MAP3K21Q5TCX8 1036 aa16.46■□□□□ 0.23
GGA3-208ENST00000579743 C20orf194Q5TEA3 1177 aa16.46■□□□□ 0.23
GGA3-208ENST00000579743 C12orf60Q5U649 245 aa16.46■□□□□ 0.23
GGA3-208ENST00000579743 USP6NLQ92738 828 aa16.46■□□□□ 0.23
GGA3-208ENST00000579743 C11orf49Q9H6J7 331 aa16.46■□□□□ 0.23
GGA3-208ENST00000579743 KANSL2Q9H9L4 492 aa16.46■□□□□ 0.23
GGA3-208ENST00000579743 ZNF287Q9HBT7 754 aa16.46■□□□□ 0.23
GGA3-208ENST00000579743 OGDHLQ9ULD0 1010 aa16.46■□□□□ 0.23
GGA3-208ENST00000579743 SPDYE16A6NNV3 312 aaPredicted RBP16.45■□□□□ 0.22
GGA3-208ENST00000579743 ERC2O15083 957 aa16.45■□□□□ 0.22
GGA3-208ENST00000579743 PRKAB2O43741 272 aa16.45■□□□□ 0.22
GGA3-208ENST00000579743 SMARCA5O60264 1052 aaPredicted RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms