RNA–Protein interactions for RNA: ENST00000579716.2

COPS3-216, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 419 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-216ENST00000579716 IER2Q9BTL4 223 aa7.86□□□□□ -1.15
COPS3-216ENST00000579716 SRRTQ9BXP5 876 aaKnown RBP7.86□□□□□ -1.15
COPS3-216ENST00000579716 ALDH8A1Q9H2A2 487 aaPredicted RBP7.86□□□□□ -1.15
COPS3-216ENST00000579716 ZNF69Q9UC07 566 aa7.86□□□□□ -1.15
COPS3-216ENST00000579716 CCDC39Q9UFE4 941 aa7.86□□□□□ -1.15
COPS3-216ENST00000579716 DIS3Q9Y2L1 958 aaKnown RBP7.86□□□□□ -1.15
COPS3-216ENST00000579716 DRD2P14416 443 aa7.85□□□□□ -1.15
COPS3-216ENST00000579716 ARID5AQ03989 594 aa7.85□□□□□ -1.15
COPS3-216ENST00000579716 RGL3Q3MIN7 710 aa7.85□□□□□ -1.15
COPS3-216ENST00000579716 C1QTNF12Q5T7M4 302 aa7.85□□□□□ -1.15
COPS3-216ENST00000579716 CDPF1Q6NVV7 123 aa7.85□□□□□ -1.15
COPS3-216ENST00000579716 ZNF438Q7Z4V0 828 aa7.85□□□□□ -1.15
COPS3-216ENST00000579716 CATIPQ7Z7H3 387 aa7.85□□□□□ -1.15
COPS3-216ENST00000579716 METTL16Q86W50 562 aaKnown RBP7.85□□□□□ -1.15
COPS3-216ENST00000579716 GATA6Q92908 595 aa7.85□□□□□ -1.15
COPS3-216ENST00000579716 RANBP17Q9H2T7 1088 aaKnown RBP7.85□□□□□ -1.15
COPS3-216ENST00000579716 SUDS3Q9H7L9 328 aaPredicted RBP7.85□□□□□ -1.15
COPS3-216ENST00000579716 AS3MTQ9HBK9 375 aa7.85□□□□□ -1.15
COPS3-216ENST00000579716 ZNF652Q9Y2D9 606 aa7.85□□□□□ -1.15
COPS3-216ENST00000579716 LOC100289279A0A1B0GTE1 492 aa7.84□□□□□ -1.15
COPS3-216ENST00000579716 RNASEH2AO75792 299 aaKnown RBP7.84□□□□□ -1.15
COPS3-216ENST00000579716 PRNPP04156 253 aa7.84□□□□□ -1.15
COPS3-216ENST00000579716 MYL1P05976 194 aa7.84□□□□□ -1.15
COPS3-216ENST00000579716 TGFB3P10600 412 aa7.84□□□□□ -1.15
COPS3-216ENST00000579716 FOSL1P15407 271 aa7.84□□□□□ -1.15
COPS3-216ENST00000579716 KCNA2P16389 499 aa7.84□□□□□ -1.15
COPS3-216ENST00000579716 CLK1P49759 484 aaKnown RBP7.84□□□□□ -1.15
COPS3-216ENST00000579716 TMEM95Q3KNT9 176 aa7.84□□□□□ -1.15
COPS3-216ENST00000579716 CCDC93Q567U6 631 aa7.84□□□□□ -1.15
COPS3-216ENST00000579716 EAPPQ56P03 285 aaPredicted RBP7.84□□□□□ -1.15
COPS3-216ENST00000579716 CCDC70Q6NSX1 233 aa7.84□□□□□ -1.15
COPS3-216ENST00000579716 NDUFAF2Q8N183 169 aa7.84□□□□□ -1.15
COPS3-216ENST00000579716 FBXL6Q8N531 539 aa7.84□□□□□ -1.15
COPS3-216ENST00000579716 TMEM102Q8N9M5 508 aaPredicted RBP7.84□□□□□ -1.15
COPS3-216ENST00000579716 SMG8Q8ND04 991 aaKnown RBP7.84□□□□□ -1.15
COPS3-216ENST00000579716 ITFG2Q969R8 447 aa7.84□□□□□ -1.15
COPS3-216ENST00000579716 ERP27Q96DN0 273 aa7.84□□□□□ -1.15
COPS3-216ENST00000579716 SUGCTQ9HAC7 445 aa7.84□□□□□ -1.15
COPS3-216ENST00000579716 THRAP3Q9Y2W1 955 aaKnown RBP7.84□□□□□ -1.15
COPS3-216ENST00000579716 GOLGA6L22H0YM25 854 aa7.83□□□□□ -1.16
COPS3-216ENST00000579716 PES1O00541 588 aaKnown RBP7.83□□□□□ -1.16
COPS3-216ENST00000579716 IPO8O15397 1037 aaKnown RBP7.83□□□□□ -1.16
COPS3-216ENST00000579716 VAMP4O75379 141 aa7.83□□□□□ -1.16
COPS3-216ENST00000579716 BPNT1O95861 308 aa7.83□□□□□ -1.16
COPS3-216ENST00000579716 TPM2P07951 284 aa7.83□□□□□ -1.16
COPS3-216ENST00000579716 RBP3P10745 1247 aa7.83□□□□□ -1.16
COPS3-216ENST00000579716 NEFHP12036 1026 aa7.83□□□□□ -1.16
COPS3-216ENST00000579716 CES1P23141 567 aa7.83□□□□□ -1.16
COPS3-216ENST00000579716 SERPINB4P48594 390 aa7.83□□□□□ -1.16
COPS3-216ENST00000579716 JAG1P78504 1218 aa7.83□□□□□ -1.16
COPS3-216ENST00000579716 C19orf57Q0VDD7 668 aa7.83□□□□□ -1.16
COPS3-216ENST00000579716 WASHC5Q12768 1159 aa7.83□□□□□ -1.16
COPS3-216ENST00000579716 OGFOD2Q6N063 350 aa7.83□□□□□ -1.16
COPS3-216ENST00000579716 HDGFL2Q7Z4V5 671 aaPredicted RBP7.83□□□□□ -1.16
COPS3-216ENST00000579716 TMEM87AQ8NBN3 555 aa7.83□□□□□ -1.16
COPS3-216ENST00000579716 FRS2Q8WU20 508 aa7.83□□□□□ -1.16
COPS3-216ENST00000579716 EDEM1Q92611 657 aa7.83□□□□□ -1.16
COPS3-216ENST00000579716 RNF34Q969K3 372 aa7.83□□□□□ -1.16
COPS3-216ENST00000579716 CDHR1Q96JP9 859 aa7.83□□□□□ -1.16
COPS3-216ENST00000579716 FBXO2Q9UK22 296 aaPredicted RBP7.83□□□□□ -1.16
COPS3-216ENST00000579716 RABGAP1Q9Y3P9 1069 aa7.83□□□□□ -1.16
COPS3-216ENST00000579716 CD151P48509 253 aa7.82□□□□□ -1.16
COPS3-216ENST00000579716 HLTFQ14527 1009 aaKnown RBP eCLIP7.82□□□□□ -1.16
COPS3-216ENST00000579716 LONRF1Q17RB8 773 aa7.82□□□□□ -1.16
COPS3-216ENST00000579716 PLEKHG4Q58EX7 1191 aa7.82□□□□□ -1.16
COPS3-216ENST00000579716 TTLL5Q6EMB2 1281 aa7.82□□□□□ -1.16
COPS3-216ENST00000579716 IQCEQ6IPM2 695 aa7.82□□□□□ -1.16
COPS3-216ENST00000579716 FDX2Q6P4F2 183 aa7.82□□□□□ -1.16
COPS3-216ENST00000579716 ABTB2Q8N961 1025 aa7.82□□□□□ -1.16
COPS3-216ENST00000579716 C12orf50Q8NA57 414 aaPredicted RBP7.82□□□□□ -1.16
COPS3-216ENST00000579716 ZKSCAN3Q9BRR0 538 aa7.82□□□□□ -1.16
COPS3-216ENST00000579716 KRTAP4-9Q9BYQ8 210 aa7.82□□□□□ -1.16
COPS3-216ENST00000579716 NRSN2Q9GZP1 204 aa7.82□□□□□ -1.16
COPS3-216ENST00000579716 ZNF700Q9H0M5 742 aa7.82□□□□□ -1.16
COPS3-216ENST00000579716 ARNT2Q9HBZ2 717 aa7.82□□□□□ -1.16
COPS3-216ENST00000579716 IPO5O00410 1097 aaKnown RBP7.81□□□□□ -1.16
COPS3-216ENST00000579716 IGHDP01880 384 aa7.81□□□□□ -1.16
COPS3-216ENST00000579716 PDGFAP04085 211 aa7.81□□□□□ -1.16
COPS3-216ENST00000579716 MYL3P08590 195 aa7.81□□□□□ -1.16
COPS3-216ENST00000579716 RRM1P23921 792 aa7.81□□□□□ -1.16
COPS3-216ENST00000579716 ITGAEP38570 1179 aa7.81□□□□□ -1.16
COPS3-216ENST00000579716 CABP4P57796 275 aa7.81□□□□□ -1.16
COPS3-216ENST00000579716 SLC20A2Q08357 652 aa7.81□□□□□ -1.16
COPS3-216ENST00000579716 TAF11Q15544 211 aa7.81□□□□□ -1.16
COPS3-216ENST00000579716 RELL1Q8IUW5 271 aa7.81□□□□□ -1.16
COPS3-216ENST00000579716 ZSCAN29Q8IWY8 852 aaPredicted RBP7.81□□□□□ -1.16
COPS3-216ENST00000579716 C2CD4AQ8NCU7 369 aaPredicted RBP7.81□□□□□ -1.16
COPS3-216ENST00000579716 FBLIM1Q8WUP2 373 aa7.81□□□□□ -1.16
COPS3-216ENST00000579716 TSR2Q969E8 191 aaKnown RBP7.81□□□□□ -1.16
COPS3-216ENST00000579716 OSMRQ99650 979 aa7.81□□□□□ -1.16
COPS3-216ENST00000579716 ACBD3Q9H3P7 528 aa7.81□□□□□ -1.16
COPS3-216ENST00000579716 METTL5Q9NRN9 209 aaKnown RBP7.81□□□□□ -1.16
COPS3-216ENST00000579716 EREGO14944 169 aa7.8□□□□□ -1.16
COPS3-216ENST00000579716 KIF1CO43896 1103 aaKnown RBP7.8□□□□□ -1.16
COPS3-216ENST00000579716 RPN1P04843 607 aaKnown RBP7.8□□□□□ -1.16
COPS3-216ENST00000579716 HNRNPCP07910 306 aaKnown RBP eCLIP7.8□□□□□ -1.16
COPS3-216ENST00000579716 ITGB5P18084 799 aa7.8□□□□□ -1.16
COPS3-216ENST00000579716 PDE6BP35913 854 aa7.8□□□□□ -1.16
COPS3-216ENST00000579716 EIF5P55010 431 aaKnown RBP7.8□□□□□ -1.16
COPS3-216ENST00000579716 NAP1L1P55209 391 aaKnown RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms