RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 TBC1D9Q6ZT07 1266 aa16.33■□□□□ 0.2
CDK5RAP3-213ENST00000579605 CRACR2BQ8N4Y2 399 aaPredicted RBP16.33■□□□□ 0.2
CDK5RAP3-213ENST00000579605 SH3RF3Q8TEJ3 882 aaPredicted RBP16.33■□□□□ 0.2
CDK5RAP3-213ENST00000579605 C1QTNF1Q9BXJ1 281 aa16.33■□□□□ 0.2
CDK5RAP3-213ENST00000579605 MYH13Q9UKX3 1938 aa16.33■□□□□ 0.2
CDK5RAP3-213ENST00000579605 GRXCR1A8MXD5 290 aa16.32■□□□□ 0.2
CDK5RAP3-213ENST00000579605 USP17L15C9J2P7 530 aa16.32■□□□□ 0.2
CDK5RAP3-213ENST00000579605 USP17L13C9JLJ4 530 aa16.32■□□□□ 0.2
CDK5RAP3-213ENST00000579605 USP17L11C9JVI0 530 aa16.32■□□□□ 0.2
CDK5RAP3-213ENST00000579605 USP17L18D6R9N7 530 aa16.32■□□□□ 0.2
CDK5RAP3-213ENST00000579605 USP17L22D6RA61 530 aa16.32■□□□□ 0.2
CDK5RAP3-213ENST00000579605 USP17L17D6RBQ6 530 aa16.32■□□□□ 0.2
CDK5RAP3-213ENST00000579605 USP17L19D6RCP7 530 aa16.32■□□□□ 0.2
CDK5RAP3-213ENST00000579605 USP17L20D6RJB6 530 aa16.32■□□□□ 0.2
CDK5RAP3-213ENST00000579605 PQBP1O60828 265 aaKnown RBP16.32■□□□□ 0.2
CDK5RAP3-213ENST00000579605 PBX2P40425 430 aa16.32■□□□□ 0.2
CDK5RAP3-213ENST00000579605 GSTO1P78417 241 aa16.32■□□□□ 0.2
CDK5RAP3-213ENST00000579605 USP17L24Q0WX57 530 aa16.32■□□□□ 0.2
CDK5RAP3-213ENST00000579605 GRB14Q14449 540 aa16.32■□□□□ 0.2
CDK5RAP3-213ENST00000579605 TMEM39AQ9NV64 488 aa16.32■□□□□ 0.2
CDK5RAP3-213ENST00000579605 RAI14Q9P0K7 980 aa16.32■□□□□ 0.2
CDK5RAP3-213ENST00000579605 BTBD7Q9P203 1132 aa16.32■□□□□ 0.2
CDK5RAP3-213ENST00000579605 ZBTB21Q9ULJ3 1066 aa16.32■□□□□ 0.2
CDK5RAP3-213ENST00000579605 PA2G4Q9UQ80 394 aaKnown RBP16.32■□□□□ 0.2
CDK5RAP3-213ENST00000579605 SEPT4O43236 478 aa16.31■□□□□ 0.2
CDK5RAP3-213ENST00000579605 CIAO1O76071 339 aa16.31■□□□□ 0.2
CDK5RAP3-213ENST00000579605 ADGRE1Q14246 886 aa16.31■□□□□ 0.2
CDK5RAP3-213ENST00000579605 AKNAD1Q5T1N1 836 aa16.31■□□□□ 0.2
CDK5RAP3-213ENST00000579605 MAPKAPK5Q8IW41 473 aa16.31■□□□□ 0.2
CDK5RAP3-213ENST00000579605 NSUN4Q96CB9 384 aaKnown RBP16.31■□□□□ 0.2
CDK5RAP3-213ENST00000579605 FEZ1Q99689 392 aa16.31■□□□□ 0.2
CDK5RAP3-213ENST00000579605 DNAJC18Q9H819 358 aa16.31■□□□□ 0.2
CDK5RAP3-213ENST00000579605 CACNA1FO60840 1977 aa16.31■□□□□ 0.2
CDK5RAP3-213ENST00000579605 MAP4K4O95819 1239 aaPredicted RBP16.3■□□□□ 0.2
CDK5RAP3-213ENST00000579605 IL15P40933 162 aaPredicted RBP16.3■□□□□ 0.2
CDK5RAP3-213ENST00000579605 FAM47AQ5JRC9 791 aa16.3■□□□□ 0.2
CDK5RAP3-213ENST00000579605 C1orf53Q5VUE5 145 aa16.3■□□□□ 0.2
CDK5RAP3-213ENST00000579605 HCN4Q9Y3Q4 1203 aa16.3■□□□□ 0.2
CDK5RAP3-213ENST00000579605 KIAA0355O15063 1070 aa16.29■□□□□ 0.2
CDK5RAP3-213ENST00000579605 ADORA2AP29274 412 aa16.29■□□□□ 0.2
CDK5RAP3-213ENST00000579605 PI16Q6UXB8 463 aa16.29■□□□□ 0.2
CDK5RAP3-213ENST00000579605 CATSPERGQ6ZRH7 1159 aa16.29■□□□□ 0.2
CDK5RAP3-213ENST00000579605 FOXP4Q8IVH2 680 aaPredicted RBP16.29■□□□□ 0.2
CDK5RAP3-213ENST00000579605 TGFBRAP1Q8WUH2 860 aa16.29■□□□□ 0.2
CDK5RAP3-213ENST00000579605 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.29■□□□□ 0.29e-16■□□□□ 9
CDK5RAP3-213ENST00000579605 NOL10Q9BSC4 688 aaKnown RBP16.29■□□□□ 0.2
CDK5RAP3-213ENST00000579605 PBX4Q9BYU1 374 aa16.29■□□□□ 0.2
CDK5RAP3-213ENST00000579605 DHX36Q9H2U1 1008 aaKnown RBP16.29■□□□□ 0.2
CDK5RAP3-213ENST00000579605 SAP30BPQ9UHR5 308 aaKnown RBP16.29■□□□□ 0.2
CDK5RAP3-213ENST00000579605 PALD1Q9ULE6 856 aa16.29■□□□□ 0.2
CDK5RAP3-213ENST00000579605 FRMPD3Q5JV73 1810 aa16.29■□□□□ 0.2
CDK5RAP3-213ENST00000579605 GH2P01242 217 aa16.28■□□□□ 0.2
CDK5RAP3-213ENST00000579605 OLFML2BQ68BL8 750 aa16.28■□□□□ 0.2
CDK5RAP3-213ENST00000579605 MICALL1Q8N3F8 863 aa16.28■□□□□ 0.2
CDK5RAP3-213ENST00000579605 MRPL50Q8N5N7 158 aaKnown RBP16.28■□□□□ 0.2
CDK5RAP3-213ENST00000579605 XAGE2Q96GT9 111 aa16.28■□□□□ 0.2
CDK5RAP3-213ENST00000579605 LRFN3Q9BTN0 628 aa16.28■□□□□ 0.2
CDK5RAP3-213ENST00000579605 AATFQ9NY61 560 aaKnown RBP eCLIP16.28■□□□□ 0.2
CDK5RAP3-213ENST00000579605 HMG20BQ9P0W2 317 aa16.28■□□□□ 0.2
CDK5RAP3-213ENST00000579605 FBXO3Q9UK99 471 aa16.28■□□□□ 0.2
CDK5RAP3-213ENST00000579605 PDS5AQ29RF7 1337 aaKnown RBP16.27■□□□□ 0.2
CDK5RAP3-213ENST00000579605 IGHA2P01877 340 aa16.27■□□□□ 0.2
CDK5RAP3-213ENST00000579605 SLC44A5Q8NCS7 719 aa16.27■□□□□ 0.2
CDK5RAP3-213ENST00000579605 NEUROD6Q96NK8 337 aa16.27■□□□□ 0.2
CDK5RAP3-213ENST00000579605 EPHX3Q9H6B9 360 aa16.27■□□□□ 0.2
CDK5RAP3-213ENST00000579605 XPNPEP3Q9NQH7 507 aa16.27■□□□□ 0.2
CDK5RAP3-213ENST00000579605 LRP2BPQ9P2M1 347 aa16.27■□□□□ 0.2
CDK5RAP3-213ENST00000579605 PHF24Q9UPV7 400 aa16.27■□□□□ 0.2
CDK5RAP3-213ENST00000579605 ATAD5Q96QE3 1844 aa16.26■□□□□ 0.19
CDK5RAP3-213ENST00000579605 SYNGAP1Q96PV0 1343 aa16.26■□□□□ 0.19
CDK5RAP3-213ENST00000579605 RLFQ13129 1914 aa16.26■□□□□ 0.19
CDK5RAP3-213ENST00000579605 A0A1B0GUL7 405 aa16.26■□□□□ 0.19
CDK5RAP3-213ENST00000579605 COBLO75128 1261 aa16.26■□□□□ 0.19
CDK5RAP3-213ENST00000579605 PGK1P00558 417 aa16.26■□□□□ 0.19
CDK5RAP3-213ENST00000579605 BMP1P13497 986 aa16.26■□□□□ 0.19
CDK5RAP3-213ENST00000579605 TFF2Q03403 129 aa16.26■□□□□ 0.19
CDK5RAP3-213ENST00000579605 MVPQ14764 893 aaKnown RBP16.26■□□□□ 0.19
CDK5RAP3-213ENST00000579605 RAB3GAP1Q15042 981 aa16.26■□□□□ 0.19
CDK5RAP3-213ENST00000579605 ALYREFQ86V81 257 aaKnown RBP16.26■□□□□ 0.19
CDK5RAP3-213ENST00000579605 SPATA5Q8NB90 893 aa16.26■□□□□ 0.19
CDK5RAP3-213ENST00000579605 TSPYL2Q9H2G4 693 aaPredicted RBP16.26■□□□□ 0.19
CDK5RAP3-213ENST00000579605 GINM1Q9NU53 330 aa16.26■□□□□ 0.19
CDK5RAP3-213ENST00000579605 ZBTB22O15209 634 aa16.25■□□□□ 0.19
CDK5RAP3-213ENST00000579605 VCAM1P19320 739 aa16.25■□□□□ 0.19
CDK5RAP3-213ENST00000579605 FAAP100Q0VG06 881 aa16.25■□□□□ 0.19
CDK5RAP3-213ENST00000579605 GORABQ5T7V8 394 aa16.25■□□□□ 0.19
CDK5RAP3-213ENST00000579605 RNF180Q86T96 592 aa16.25■□□□□ 0.19
CDK5RAP3-213ENST00000579605 ACER1Q8TDN7 264 aa16.25■□□□□ 0.19
CDK5RAP3-213ENST00000579605 C12orf42Q96LP6 360 aa16.25■□□□□ 0.19
CDK5RAP3-213ENST00000579605 MOV10L1Q9BXT6 1211 aaKnown RBP16.25■□□□□ 0.19
CDK5RAP3-213ENST00000579605 RPAP3Q9H6T3 665 aaPredicted RBP16.25■□□□□ 0.19
CDK5RAP3-213ENST00000579605 A0A1W2PQ45 241 aaPredicted RBP16.24■□□□□ 0.19
CDK5RAP3-213ENST00000579605 A0A1W2PQY0 241 aa16.24■□□□□ 0.19
CDK5RAP3-213ENST00000579605 SPDYE16A6NNV3 312 aaPredicted RBP16.24■□□□□ 0.19
CDK5RAP3-213ENST00000579605 DCDC2CA8MYV0 355 aa16.24■□□□□ 0.19
CDK5RAP3-213ENST00000579605 BAG3O95817 575 aa16.24■□□□□ 0.19
CDK5RAP3-213ENST00000579605 UBTFL1P0CB47 393 aaPredicted RBP16.24■□□□□ 0.19
CDK5RAP3-213ENST00000579605 ACRP10323 421 aa16.24■□□□□ 0.19
CDK5RAP3-213ENST00000579605 RARBP10826 455 aa16.24■□□□□ 0.19
CDK5RAP3-213ENST00000579605 KCNQ1P51787 676 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms