RNA–Protein interactions for RNA: ENST00000579449.1

TSEN54-206, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-206ENST00000579449 CEP95Q96GE4 821 aa16.26■□□□□ 0.19
TSEN54-206ENST00000579449 SLKQ9H2G2 1235 aaPredicted RBP16.26■□□□□ 0.19
TSEN54-206ENST00000579449 CLEC11AQ9Y240 323 aa16.26■□□□□ 0.19
TSEN54-206ENST00000579449 GOLGA8BA8MQT2 603 aa16.25■□□□□ 0.19
TSEN54-206ENST00000579449 PHF20L1A8MW92 1017 aa16.25■□□□□ 0.19
TSEN54-206ENST00000579449 PFKFB2O60825 505 aa16.25■□□□□ 0.19
TSEN54-206ENST00000579449 POTEIP0CG38 1075 aa16.25■□□□□ 0.19
TSEN54-206ENST00000579449 POTEJP0CG39 1038 aa16.25■□□□□ 0.19
TSEN54-206ENST00000579449 GUCY1A2P33402 732 aa16.25■□□□□ 0.19
TSEN54-206ENST00000579449 JAG1P78504 1218 aa16.25■□□□□ 0.19
TSEN54-206ENST00000579449 ST3GAL1Q11201 340 aa16.25■□□□□ 0.19
TSEN54-206ENST00000579449 SUPT20HL1Q3ZLR7 823 aa16.25■□□□□ 0.19
TSEN54-206ENST00000579449 DCAF15Q66K64 600 aa16.25■□□□□ 0.19
TSEN54-206ENST00000579449 DLK2Q6UY11 383 aa16.25■□□□□ 0.19
TSEN54-206ENST00000579449 TMEM179Q6ZVK1 233 aa16.25■□□□□ 0.19
TSEN54-206ENST00000579449 RAB11FIP4Q86YS3 637 aa16.25■□□□□ 0.19
TSEN54-206ENST00000579449 CCDC83Q8IWF9 413 aa16.25■□□□□ 0.19
TSEN54-206ENST00000579449 CABP5Q9NP86 173 aa16.25■□□□□ 0.19
TSEN54-206ENST00000579449 NMRK2Q9NPI5 230 aa16.25■□□□□ 0.19
TSEN54-206ENST00000579449 MTMR4Q9NYA4 1195 aa16.25■□□□□ 0.19
TSEN54-206ENST00000579449 HPS5Q9UPZ3 1129 aa16.25■□□□□ 0.19
TSEN54-206ENST00000579449 SLC12A7Q9Y666 1083 aa16.25■□□□□ 0.19
TSEN54-206ENST00000579449 SSC5DA1L4H1 1573 aa16.25■□□□□ 0.19
TSEN54-206ENST00000579449 ZBTB43O43298 467 aa16.24■□□□□ 0.19
TSEN54-206ENST00000579449 GH2P01242 217 aa16.24■□□□□ 0.19
TSEN54-206ENST00000579449 HSP90AA1P07900 732 aaKnown RBP16.24■□□□□ 0.19
TSEN54-206ENST00000579449 HOXD11P31277 338 aaPredicted RBP16.24■□□□□ 0.19
TSEN54-206ENST00000579449 CAP2P40123 477 aa16.24■□□□□ 0.19
TSEN54-206ENST00000579449 NOVP48745 357 aa16.24■□□□□ 0.19
TSEN54-206ENST00000579449 CCT2P78371 535 aaKnown RBP16.24■□□□□ 0.19
TSEN54-206ENST00000579449 SEPT2Q15019 361 aa16.24■□□□□ 0.19
TSEN54-206ENST00000579449 SYNE3Q6ZMZ3 975 aa16.24■□□□□ 0.19
TSEN54-206ENST00000579449 CLEC10AQ8IUN9 316 aa16.24■□□□□ 0.19
TSEN54-206ENST00000579449 ZNF654Q8IZM8 581 aa16.24■□□□□ 0.19
TSEN54-206ENST00000579449 MYL10Q9BUA6 226 aa16.24■□□□□ 0.19
TSEN54-206ENST00000579449 ZNF341Q9BYN7 854 aa16.24■□□□□ 0.19
TSEN54-206ENST00000579449 GLIS2Q9BZE0 524 aaPredicted RBP16.24■□□□□ 0.19
TSEN54-206ENST00000579449 KAT14Q9H8E8 782 aa16.24■□□□□ 0.19
TSEN54-206ENST00000579449 STX8Q9UNK0 236 aa16.24■□□□□ 0.19
TSEN54-206ENST00000579449 RXRAP19793 462 aa16.23■□□□□ 0.19
TSEN54-206ENST00000579449 SCRN1Q12765 414 aa16.23■□□□□ 0.19
TSEN54-206ENST00000579449 CDC37L1Q7L3B6 337 aa16.23■□□□□ 0.19
TSEN54-206ENST00000579449 CATIPQ7Z7H3 387 aa16.23■□□□□ 0.19
TSEN54-206ENST00000579449 MICU3Q86XE3 530 aa16.23■□□□□ 0.19
TSEN54-206ENST00000579449 GTF3C6Q969F1 213 aa16.23■□□□□ 0.19
TSEN54-206ENST00000579449 TMEM47Q9BQJ4 181 aa16.23■□□□□ 0.19
TSEN54-206ENST00000579449 NCOA5Q9HCD5 579 aaKnown RBP16.23■□□□□ 0.19
TSEN54-206ENST00000579449 GOLGA8AA7E2F4 631 aa16.22■□□□□ 0.19
TSEN54-206ENST00000579449 TTLL1O95922 423 aa16.22■□□□□ 0.19
TSEN54-206ENST00000579449 TOP1P11387 765 aaKnown RBP16.22■□□□□ 0.19
TSEN54-206ENST00000579449 METAP2P50579 478 aaKnown RBP eCLIP16.22■□□□□ 0.19
TSEN54-206ENST00000579449 RAB3GAP1Q15042 981 aa16.22■□□□□ 0.19
TSEN54-206ENST00000579449 PPP4R3BQ5MIZ7 849 aa16.22■□□□□ 0.19
TSEN54-206ENST00000579449 LDHDQ86WU2 507 aa16.22■□□□□ 0.19
TSEN54-206ENST00000579449 CCDC144CPQ8IYA2 1237 aa16.22■□□□□ 0.19
TSEN54-206ENST00000579449 PNMA1Q8ND90 353 aa16.22■□□□□ 0.19
TSEN54-206ENST00000579449 NUP133Q8WUM0 1156 aa16.22■□□□□ 0.19
TSEN54-206ENST00000579449 CDCA5Q96FF9 252 aa16.22■□□□□ 0.19
TSEN54-206ENST00000579449 KANSL2Q9H9L4 492 aa16.22■□□□□ 0.19
TSEN54-206ENST00000579449 CLIP2Q9UDT6 1046 aa16.22■□□□□ 0.19
TSEN54-206ENST00000579449 ZNF112Q9UJU3 913 aa16.22■□□□□ 0.19
TSEN54-206ENST00000579449 ZBTB21Q9ULJ3 1066 aa16.22■□□□□ 0.19
TSEN54-206ENST00000579449 FZD1Q9UP38 647 aa16.22■□□□□ 0.19
TSEN54-206ENST00000579449 DOCK1Q14185 1865 aa16.22■□□□□ 0.19
TSEN54-206ENST00000579449 CTNND1O60716 968 aaKnown RBP16.21■□□□□ 0.19
TSEN54-206ENST00000579449 DDAH1O94760 285 aa16.21■□□□□ 0.19
TSEN54-206ENST00000579449 EEF2P13639 858 aaKnown RBP16.21■□□□□ 0.19
TSEN54-206ENST00000579449 INPP5BP32019 993 aa16.21■□□□□ 0.19
TSEN54-206ENST00000579449 RCAN1P53805 252 aa16.21■□□□□ 0.19
TSEN54-206ENST00000579449 ATP2B2Q01814 1243 aa16.21■□□□□ 0.19
TSEN54-206ENST00000579449 ICA1Q05084 483 aa16.21■□□□□ 0.19
TSEN54-206ENST00000579449 MAP1SQ66K74 1059 aaPredicted RBP16.21■□□□□ 0.19
TSEN54-206ENST00000579449 INTS4Q96HW7 963 aaKnown RBP16.21■□□□□ 0.19
TSEN54-206ENST00000579449 NYAP2Q9P242 653 aa16.21■□□□□ 0.19
TSEN54-206ENST00000579449 NID2Q14112 1375 aa16.21■□□□□ 0.19
TSEN54-206ENST00000579449 USP2O75604 605 aaPredicted RBP16.2■□□□□ 0.18
TSEN54-206ENST00000579449 ASNSP08243 561 aa16.2■□□□□ 0.18
TSEN54-206ENST00000579449 CALM1P0DP23 149 aa16.2■□□□□ 0.18
TSEN54-206ENST00000579449 CALM2P0DP24 149 aa16.2■□□□□ 0.18
TSEN54-206ENST00000579449 CALM3P0DP25 149 aa16.2■□□□□ 0.18
TSEN54-206ENST00000579449 CDC27P30260 824 aa16.2■□□□□ 0.18
TSEN54-206ENST00000579449 TROAPQ12815 778 aa16.2■□□□□ 0.18
TSEN54-206ENST00000579449 PRKG1Q13976 671 aa16.2■□□□□ 0.18
TSEN54-206ENST00000579449 RTN1Q16799 776 aa16.2■□□□□ 0.18
TSEN54-206ENST00000579449 SIAH1Q8IUQ4 282 aa16.2■□□□□ 0.18
TSEN54-206ENST00000579449 KLRG1Q96E93 195 aa16.2■□□□□ 0.18
TSEN54-206ENST00000579449 WRNIP1Q96S55 665 aa16.2■□□□□ 0.18
TSEN54-206ENST00000579449 FAM217BQ9NTX9 383 aaPredicted RBP16.2■□□□□ 0.18
TSEN54-206ENST00000579449 GINM1Q9NU53 330 aa16.2■□□□□ 0.18
TSEN54-206ENST00000579449 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.2■□□□□ 0.18
TSEN54-206ENST00000579449 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.2■□□□□ 0.18
TSEN54-206ENST00000579449 DTNBO60941 627 aa16.19■□□□□ 0.18
TSEN54-206ENST00000579449 NF2P35240 595 aa16.19■□□□□ 0.18
TSEN54-206ENST00000579449 ADD1P35611 737 aaKnown RBP16.19■□□□□ 0.18
TSEN54-206ENST00000579449 LRRC47Q8N1G4 583 aaKnown RBP16.19■□□□□ 0.18
TSEN54-206ENST00000579449 FANCBQ8NB91 859 aa16.19■□□□□ 0.18
TSEN54-206ENST00000579449 MKL1Q969V6 931 aa16.19■□□□□ 0.18
TSEN54-206ENST00000579449 CHMP4CQ96CF2 233 aa16.19■□□□□ 0.18
TSEN54-206ENST00000579449 MTMR7Q9Y216 660 aa16.19■□□□□ 0.18
TSEN54-206ENST00000579449 OTOFQ9HC10 1997 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms