RNA–Protein interactions for RNA: ENST00000579329.1

LIMD2-207, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 920 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-207ENST00000579329 FAM227BQ96M60 508 aa28.59■■■□□ 2.17
LIMD2-207ENST00000579329 FEZ1Q99689 392 aa28.59■■■□□ 2.17
LIMD2-207ENST00000579329 A0A0D9SFI3 127 aa28.58■■■□□ 2.17
LIMD2-207ENST00000579329 NMIQ13287 307 aaPredicted RBP28.58■■■□□ 2.17
LIMD2-207ENST00000579329 MCMDC2Q4G0Z9 681 aa28.58■■■□□ 2.17
LIMD2-207ENST00000579329 USP17L2Q6R6M4 530 aa28.58■■■□□ 2.17
LIMD2-207ENST00000579329 NAPBQ9H115 298 aa28.58■■■□□ 2.17
LIMD2-207ENST00000579329 TRIM17Q9Y577 477 aa28.58■■■□□ 2.17
LIMD2-207ENST00000579329 AKR1B1P15121 316 aa28.57■■■□□ 2.16
LIMD2-207ENST00000579329 SDSP20132 328 aa28.57■■■□□ 2.16
LIMD2-207ENST00000579329 USP14P54578 494 aa28.57■■■□□ 2.16
LIMD2-207ENST00000579329 ARHGEF6Q15052 776 aa28.57■■■□□ 2.16
LIMD2-207ENST00000579329 SMCR8Q8TEV9 937 aaPredicted RBP28.57■■■□□ 2.16
LIMD2-207ENST00000579329 OSBPP22059 807 aa28.56■■■□□ 2.16
LIMD2-207ENST00000579329 KIF22Q14807 665 aa28.56■■■□□ 2.16
LIMD2-207ENST00000579329 FBXO46Q6PJ61 603 aaPredicted RBP28.56■■■□□ 2.16
LIMD2-207ENST00000579329 OTOP1Q7RTM1 612 aa28.56■■■□□ 2.16
LIMD2-207ENST00000579329 KIAA1683Q9H0B3 1180 aa28.56■■■□□ 2.16
LIMD2-207ENST00000579329 EFCC1Q9HA90 598 aa28.56■■■□□ 2.16
LIMD2-207ENST00000579329 BCRP11274 1271 aa28.55■■■□□ 2.16
LIMD2-207ENST00000579329 LACTBP83111 547 aaPredicted RBP28.55■■■□□ 2.16
LIMD2-207ENST00000579329 TTC22Q5TAA0 569 aa28.55■■■□□ 2.16
LIMD2-207ENST00000579329 ACER1Q8TDN7 264 aa28.55■■■□□ 2.16
LIMD2-207ENST00000579329 C12orf42Q96LP6 360 aa28.55■■■□□ 2.16
LIMD2-207ENST00000579329 EMILIN3Q9NT22 766 aa28.55■■■□□ 2.16
LIMD2-207ENST00000579329 HIP1O00291 1037 aa28.54■■■□□ 2.16
LIMD2-207ENST00000579329 ZYXQ15942 572 aaKnown RBP28.54■■■□□ 2.16
LIMD2-207ENST00000579329 MKNK2Q9HBH9 465 aa28.54■■■□□ 2.16
LIMD2-207ENST00000579329 ZNF287Q9HBT7 754 aa28.54■■■□□ 2.16
LIMD2-207ENST00000579329 DIAPH3Q9NSV4 1193 aa28.54■■■□□ 2.16
LIMD2-207ENST00000579329 FOXP2O15409 715 aa28.53■■■□□ 2.16
LIMD2-207ENST00000579329 HOXA7P31268 230 aaPredicted RBP28.53■■■□□ 2.16
LIMD2-207ENST00000579329 IRX3P78415 501 aaPredicted RBP28.53■■■□□ 2.16
LIMD2-207ENST00000579329 STK11IPQ8N1F8 1099 aa28.53■■■□□ 2.16
LIMD2-207ENST00000579329 ASCC2Q9H1I8 757 aaPredicted RBP28.53■■■□□ 2.16
LIMD2-207ENST00000579329 CCDC171Q6TFL3 1326 aa28.52■■■□□ 2.16
LIMD2-207ENST00000579329 SLC3A2P08195 630 aaKnown RBP28.52■■■□□ 2.16
LIMD2-207ENST00000579329 MFAP1P55081 439 aaKnown RBP28.52■■■□□ 2.16
LIMD2-207ENST00000579329 ICA1Q05084 483 aa28.52■■■□□ 2.16
LIMD2-207ENST00000579329 VPS53Q5VIR6 699 aa28.52■■■□□ 2.16
LIMD2-207ENST00000579329 CENPQQ7L2Z9 268 aaPredicted RBP28.52■■■□□ 2.16
LIMD2-207ENST00000579329 GSPT1P15170 499 aaKnown RBP28.51■■■□□ 2.15
LIMD2-207ENST00000579329 RASA1P20936 1047 aa28.51■■■□□ 2.15
LIMD2-207ENST00000579329 CAP1Q01518 475 aa28.51■■■□□ 2.15
LIMD2-207ENST00000579329 PPARAQ07869 468 aa28.51■■■□□ 2.15
LIMD2-207ENST00000579329 ZNF589Q86UQ0 364 aaPredicted RBP28.51■■■□□ 2.15
LIMD2-207ENST00000579329 ARHGEF10LQ9HCE6 1279 aa28.51■■■□□ 2.15
LIMD2-207ENST00000579329 GCLCP48506 637 aaPredicted RBP28.5■■■□□ 2.15
LIMD2-207ENST00000579329 ALX1Q15699 326 aa28.5■■■□□ 2.15
LIMD2-207ENST00000579329 SH2D4AQ9H788 454 aa28.5■■■□□ 2.15
LIMD2-207ENST00000579329 A0A1W2PRG0 241 aa28.49■■■□□ 2.15
LIMD2-207ENST00000579329 NEFLP07196 543 aa28.49■■■□□ 2.15
LIMD2-207ENST00000579329 PDE4BQ07343 736 aa28.49■■■□□ 2.15
LIMD2-207ENST00000579329 CLEC10AQ8IUN9 316 aa28.49■■■□□ 2.15
LIMD2-207ENST00000579329 ARHGAP39Q9C0H5 1083 aa28.49■■■□□ 2.15
LIMD2-207ENST00000579329 KANSL2Q9H9L4 492 aa28.49■■■□□ 2.15
LIMD2-207ENST00000579329 GNRH1P01148 92 aa28.48■■■□□ 2.15
LIMD2-207ENST00000579329 VCAM1P19320 739 aa28.48■■■□□ 2.15
LIMD2-207ENST00000579329 CWC27Q6UX04 472 aaKnown RBP28.48■■■□□ 2.15
LIMD2-207ENST00000579329 ZNF444Q8N0Y2 327 aaPredicted RBP28.48■■■□□ 2.15
LIMD2-207ENST00000579329 PTPN22Q9Y2R2 807 aa28.48■■■□□ 2.15
LIMD2-207ENST00000579329 HTTP42858 3142 aa28.47■■■□□ 2.15
LIMD2-207ENST00000579329 USP17L15C9J2P7 530 aa28.47■■■□□ 2.15
LIMD2-207ENST00000579329 USP17L13C9JLJ4 530 aa28.47■■■□□ 2.15
LIMD2-207ENST00000579329 USP17L11C9JVI0 530 aa28.47■■■□□ 2.15
LIMD2-207ENST00000579329 USP17L18D6R9N7 530 aa28.47■■■□□ 2.15
LIMD2-207ENST00000579329 USP17L22D6RA61 530 aa28.47■■■□□ 2.15
LIMD2-207ENST00000579329 USP17L17D6RBQ6 530 aa28.47■■■□□ 2.15
LIMD2-207ENST00000579329 USP17L19D6RCP7 530 aa28.47■■■□□ 2.15
LIMD2-207ENST00000579329 USP17L20D6RJB6 530 aa28.47■■■□□ 2.15
LIMD2-207ENST00000579329 HSPD1P10809 573 aaKnown RBP28.47■■■□□ 2.15
LIMD2-207ENST00000579329 PSMC4P43686 418 aa28.47■■■□□ 2.15
LIMD2-207ENST00000579329 USP17L24Q0WX57 530 aa28.47■■■□□ 2.15
LIMD2-207ENST00000579329 FAM110CQ1W6H9 321 aa28.47■■■□□ 2.15
LIMD2-207ENST00000579329 ANKRD13CQ8N6S4 541 aa28.47■■■□□ 2.15
LIMD2-207ENST00000579329 TMX2Q9Y320 296 aa28.47■■■□□ 2.15
LIMD2-207ENST00000579329 ZSWIM8A7E2V4 1837 aa28.47■■■□□ 2.15
LIMD2-207ENST00000579329 GREB1LQ9C091 1923 aaPredicted RBP28.47■■■□□ 2.15
LIMD2-207ENST00000579329 ZMYM6O95789 1325 aa28.46■■■□□ 2.15
LIMD2-207ENST00000579329 PRDM1O75626 825 aa28.46■■■□□ 2.15
LIMD2-207ENST00000579329 SIAH1Q8IUQ4 282 aa28.46■■■□□ 2.15
LIMD2-207ENST00000579329 P2RX7Q99572 595 aaKnown RBP28.46■■■□□ 2.15
LIMD2-207ENST00000579329 KIAA0100Q14667 2235 aaKnown RBP28.45■■■□□ 2.15
LIMD2-207ENST00000579329 ECM2O94769 699 aaPredicted RBP28.45■■■□□ 2.14
LIMD2-207ENST00000579329 FMNL1O95466 1100 aaPredicted RBP28.45■■■□□ 2.14
LIMD2-207ENST00000579329 FCGRTP55899 365 aa28.45■■■□□ 2.14
LIMD2-207ENST00000579329 HERVK_113P62684 666 aa28.45■■■□□ 2.14
LIMD2-207ENST00000579329 GTF3C2Q8WUA4 911 aaPredicted RBP28.45■■■□□ 2.14
LIMD2-207ENST00000579329 TRIM47Q96LD4 638 aa28.45■■■□□ 2.14
LIMD2-207ENST00000579329 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.45■■■□□ 2.14
LIMD2-207ENST00000579329 ANAPC4Q9UJX5 808 aa28.45■■■□□ 2.14
LIMD2-207ENST00000579329 RBBP6Q7Z6E9 1792 aaKnown RBP28.45■■■□□ 2.14
LIMD2-207ENST00000579329 FGAP02671 866 aa28.44■■■□□ 2.14
LIMD2-207ENST00000579329 CENPBP07199 599 aaPredicted RBP28.44■■■□□ 2.14
LIMD2-207ENST00000579329 EEF2P13639 858 aaKnown RBP28.44■■■□□ 2.14
LIMD2-207ENST00000579329 CTGFP29279 349 aa28.44■■■□□ 2.14
LIMD2-207ENST00000579329 PRMT2P55345 433 aa28.44■■■□□ 2.14
LIMD2-207ENST00000579329 ATP2B2Q01814 1243 aa28.44■■■□□ 2.14
LIMD2-207ENST00000579329 CATSPERGQ6ZRH7 1159 aa28.44■■■□□ 2.14
LIMD2-207ENST00000579329 LPAR1Q92633 364 aa28.44■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms