RNA–Protein interactions for RNA: ENST00000579316.5

CSNK1D-211, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 692 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-211ENST00000579316 SEPT4O43236 478 aa17.15■□□□□ 0.34
CSNK1D-211ENST00000579316 TLE2Q04725 743 aa17.15■□□□□ 0.34
CSNK1D-211ENST00000579316 OLFML2BQ68BL8 750 aa17.15■□□□□ 0.34
CSNK1D-211ENST00000579316 USP17L2Q6R6M4 530 aa17.15■□□□□ 0.34
CSNK1D-211ENST00000579316 TEX11Q8IYF3 940 aa17.15■□□□□ 0.34
CSNK1D-211ENST00000579316 UHRF1Q96T88 793 aaPredicted RBP17.15■□□□□ 0.34
CSNK1D-211ENST00000579316 TACC3Q9Y6A5 838 aa17.15■□□□□ 0.34
CSNK1D-211ENST00000579316 NDUFB9Q9Y6M9 179 aa17.15■□□□□ 0.34
CSNK1D-211ENST00000579316 MYO9BQ13459 2157 aa17.15■□□□□ 0.34
CSNK1D-211ENST00000579316 ADCYAP1R1P41586 468 aa17.14■□□□□ 0.33
CSNK1D-211ENST00000579316 MRPS5P82675 430 aaKnown RBP17.14■□□□□ 0.33
CSNK1D-211ENST00000579316 SHROOM1Q2M3G4 852 aaPredicted RBP17.14■□□□□ 0.33
CSNK1D-211ENST00000579316 CCDC184Q52MB2 194 aa17.14■□□□□ 0.33
CSNK1D-211ENST00000579316 TIFAQ96CG3 184 aa17.14■□□□□ 0.33
CSNK1D-211ENST00000579316 IVNS1ABPQ9Y6Y0 642 aa17.14■□□□□ 0.33
CSNK1D-211ENST00000579316 USP17L15C9J2P7 530 aa17.13■□□□□ 0.33
CSNK1D-211ENST00000579316 USP17L13C9JLJ4 530 aa17.13■□□□□ 0.33
CSNK1D-211ENST00000579316 USP17L11C9JVI0 530 aa17.13■□□□□ 0.33
CSNK1D-211ENST00000579316 USP17L18D6R9N7 530 aa17.13■□□□□ 0.33
CSNK1D-211ENST00000579316 USP17L22D6RA61 530 aa17.13■□□□□ 0.33
CSNK1D-211ENST00000579316 USP17L17D6RBQ6 530 aa17.13■□□□□ 0.33
CSNK1D-211ENST00000579316 USP17L19D6RCP7 530 aa17.13■□□□□ 0.33
CSNK1D-211ENST00000579316 USP17L20D6RJB6 530 aa17.13■□□□□ 0.33
CSNK1D-211ENST00000579316 CLTBP09497 229 aa17.13■□□□□ 0.33
CSNK1D-211ENST00000579316 USP17L24Q0WX57 530 aa17.13■□□□□ 0.33
CSNK1D-211ENST00000579316 LRRC41Q15345 812 aa17.13■□□□□ 0.33
CSNK1D-211ENST00000579316 FOXP4Q8IVH2 680 aaPredicted RBP17.13■□□□□ 0.33
CSNK1D-211ENST00000579316 MRPL50Q8N5N7 158 aaKnown RBP17.13■□□□□ 0.33
CSNK1D-211ENST00000579316 C1QTNF1Q9BXJ1 281 aa17.13■□□□□ 0.33
CSNK1D-211ENST00000579316 GDF11O95390 407 aa17.12■□□□□ 0.33
CSNK1D-211ENST00000579316 FPGSQ05932 587 aa17.12■□□□□ 0.33
CSNK1D-211ENST00000579316 WDR78Q5VTH9 848 aa17.12■□□□□ 0.33
CSNK1D-211ENST00000579316 CATSPERGQ6ZRH7 1159 aa17.12■□□□□ 0.33
CSNK1D-211ENST00000579316 SH3RF3Q8TEJ3 882 aaPredicted RBP17.12■□□□□ 0.33
CSNK1D-211ENST00000579316 GAS2L1Q99501 681 aaPredicted RBP17.12■□□□□ 0.33
CSNK1D-211ENST00000579316 COPRSQ9NQ92 184 aa17.12■□□□□ 0.33
CSNK1D-211ENST00000579316 BTBD7Q9P203 1132 aa17.12■□□□□ 0.33
CSNK1D-211ENST00000579316 PHF24Q9UPV7 400 aa17.12■□□□□ 0.33
CSNK1D-211ENST00000579316 TIMM10P62072 90 aa17.11■□□□□ 0.33
CSNK1D-211ENST00000579316 MVPQ14764 893 aaKnown RBP17.11■□□□□ 0.33
CSNK1D-211ENST00000579316 XAGE2Q96GT9 111 aa17.11■□□□□ 0.33
CSNK1D-211ENST00000579316 HMG20BQ9P0W2 317 aa17.11■□□□□ 0.33
CSNK1D-211ENST00000579316 FOCADQ5VW36 1801 aa17.1■□□□□ 0.33
CSNK1D-211ENST00000579316 RAG1P15918 1043 aa17.1■□□□□ 0.33
CSNK1D-211ENST00000579316 FERMT2Q96AC1 680 aa17.1■□□□□ 0.33
CSNK1D-211ENST00000579316 CHD7Q9P2D1 2997 aa17.1■□□□□ 0.33
CSNK1D-211ENST00000579316 SALL2Q9Y467 1007 aaPredicted RBP17.1■□□□□ 0.33
CSNK1D-211ENST00000579316 XIRP2A4UGR9 3374 aa17.1■□□□□ 0.33
CSNK1D-211ENST00000579316 CDK5RAP2Q96SN8 1893 aa17.1■□□□□ 0.33
CSNK1D-211ENST00000579316 A0A1B0GUL7 405 aa17.09■□□□□ 0.33
CSNK1D-211ENST00000579316 SPDYE16A6NNV3 312 aaPredicted RBP17.09■□□□□ 0.33
CSNK1D-211ENST00000579316 STRNO43815 780 aa17.09■□□□□ 0.33
CSNK1D-211ENST00000579316 ADORA2AP29274 412 aa17.09■□□□□ 0.33
CSNK1D-211ENST00000579316 USP14P54578 494 aa17.09■□□□□ 0.33
CSNK1D-211ENST00000579316 ANO1Q5XXA6 986 aa17.09■□□□□ 0.33
CSNK1D-211ENST00000579316 TBC1D9Q6ZT07 1266 aa17.09■□□□□ 0.33
CSNK1D-211ENST00000579316 DPP9Q86TI2 863 aa17.09■□□□□ 0.33
CSNK1D-211ENST00000579316 CRACR2BQ8N4Y2 399 aaPredicted RBP17.09■□□□□ 0.33
CSNK1D-211ENST00000579316 SPATA5Q8NB90 893 aa17.09■□□□□ 0.33
CSNK1D-211ENST00000579316 PA2G4Q9UQ80 394 aaKnown RBP17.09■□□□□ 0.33
CSNK1D-211ENST00000579316 FLT1P17948 1338 aa17.09■□□□□ 0.33
CSNK1D-211ENST00000579316 MUC6Q6W4X9 2439 aa17.08■□□□□ 0.33
CSNK1D-211ENST00000579316 PLCG2P16885 1265 aa17.08■□□□□ 0.32
CSNK1D-211ENST00000579316 VCAM1P19320 739 aa17.08■□□□□ 0.32
CSNK1D-211ENST00000579316 PPP4CP60510 307 aa17.08■□□□□ 0.32
CSNK1D-211ENST00000579316 ADGRE1Q14246 886 aa17.08■□□□□ 0.32
CSNK1D-211ENST00000579316 FAM47AQ5JRC9 791 aa17.08■□□□□ 0.32
CSNK1D-211ENST00000579316 RASIP1Q5U651 963 aa17.08■□□□□ 0.32
CSNK1D-211ENST00000579316 PI16Q6UXB8 463 aa17.08■□□□□ 0.32
CSNK1D-211ENST00000579316 PPM1EQ8WY54 764 aa17.08■□□□□ 0.32
CSNK1D-211ENST00000579316 TRIM34Q9BYJ4 488 aa17.08■□□□□ 0.32
CSNK1D-211ENST00000579316 KIAA1683Q9H0B3 1180 aa17.08■□□□□ 0.32
CSNK1D-211ENST00000579316 PRDM12Q9H4Q4 367 aa17.08■□□□□ 0.32
CSNK1D-211ENST00000579316 RAI14Q9P0K7 980 aa17.08■□□□□ 0.32
CSNK1D-211ENST00000579316 AKAP2Q9Y2D5 859 aa17.08■□□□□ 0.32
CSNK1D-211ENST00000579316 ROBO3Q96MS0 1386 aa17.07■□□□□ 0.32
CSNK1D-211ENST00000579316 ANP32CO43423 234 aa17.07■□□□□ 0.32
CSNK1D-211ENST00000579316 GH2P01242 217 aa17.07■□□□□ 0.32
CSNK1D-211ENST00000579316 MYCNP04198 464 aaPredicted RBP17.07■□□□□ 0.32
CSNK1D-211ENST00000579316 UBTFL1P0CB47 393 aaPredicted RBP17.07■□□□□ 0.32
CSNK1D-211ENST00000579316 ANKRD33Q7Z3H0 272 aa17.07■□□□□ 0.32
CSNK1D-211ENST00000579316 MAPKAPK5Q8IW41 473 aa17.07■□□□□ 0.32
CSNK1D-211ENST00000579316 SHCBP1Q8NEM2 672 aa17.07■□□□□ 0.32
CSNK1D-211ENST00000579316 IL27Q8NEV9 243 aa17.07■□□□□ 0.32
CSNK1D-211ENST00000579316 TOX2Q96NM4 488 aa17.07■□□□□ 0.32
CSNK1D-211ENST00000579316 FEZ1Q99689 392 aa17.07■□□□□ 0.32
CSNK1D-211ENST00000579316 PBX4Q9BYU1 374 aa17.07■□□□□ 0.32
CSNK1D-211ENST00000579316 CXXC1Q9P0U4 656 aaPredicted RBP17.07■□□□□ 0.32
CSNK1D-211ENST00000579316 COBLO75128 1261 aa17.06■□□□□ 0.32
CSNK1D-211ENST00000579316 BAG3O95817 575 aa17.06■□□□□ 0.32
CSNK1D-211ENST00000579316 ARID4AP29374 1257 aaPredicted RBP17.06■□□□□ 0.32
CSNK1D-211ENST00000579316 TGFBRAP1Q8WUH2 860 aa17.06■□□□□ 0.32
CSNK1D-211ENST00000579316 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.06■□□□□ 0.327e-9■■■□□ 18.2
CSNK1D-211ENST00000579316 NOL10Q9BSC4 688 aaKnown RBP17.06■□□□□ 0.32
CSNK1D-211ENST00000579316 MOV10L1Q9BXT6 1211 aaKnown RBP17.06■□□□□ 0.32
CSNK1D-211ENST00000579316 TMEM39AQ9NV64 488 aa17.06■□□□□ 0.32
CSNK1D-211ENST00000579316 NRBP1Q9UHY1 535 aa17.06■□□□□ 0.32
CSNK1D-211ENST00000579316 PALD1Q9ULE6 856 aa17.06■□□□□ 0.32
CSNK1D-211ENST00000579316 A0A0G2JMZ2 1700 aa17.06■□□□□ 0.32
CSNK1D-211ENST00000579316 PLXNA1Q9UIW2 1896 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms