RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 HIP1O00291 1037 aa7.81□□□□□ -1.16
TRAF4-213ENST00000578917 GNRH1P01148 92 aa7.81□□□□□ -1.16
TRAF4-213ENST00000578917 GCLCP48506 637 aaPredicted RBP7.81□□□□□ -1.16
TRAF4-213ENST00000578917 FCGRTP55899 365 aa7.81□□□□□ -1.16
TRAF4-213ENST00000578917 EVX2Q03828 476 aa7.81□□□□□ -1.16
TRAF4-213ENST00000578917 ICA1Q05084 483 aa7.81□□□□□ -1.16
TRAF4-213ENST00000578917 GABPAQ06546 454 aa7.81□□□□□ -1.16
TRAF4-213ENST00000578917 USP17L24Q0WX57 530 aa7.81□□□□□ -1.16
TRAF4-213ENST00000578917 MCMDC2Q4G0Z9 681 aa7.81□□□□□ -1.16
TRAF4-213ENST00000578917 SBK1Q52WX2 424 aa7.81□□□□□ -1.16
TRAF4-213ENST00000578917 SH3D19Q5HYK7 790 aa7.81□□□□□ -1.16
TRAF4-213ENST00000578917 SAMD1Q6SPF0 538 aaPredicted RBP7.81□□□□□ -1.16
TRAF4-213ENST00000578917 CCDC129Q6ZRS4 1044 aa7.81□□□□□ -1.16
TRAF4-213ENST00000578917 C16orf86Q6ZW13 317 aa7.81□□□□□ -1.16
TRAF4-213ENST00000578917 TICAM2Q86XR7 235 aa7.81□□□□□ -1.16
TRAF4-213ENST00000578917 RAET1EQ8TD07 263 aa7.81□□□□□ -1.16
TRAF4-213ENST00000578917 ACER1Q8TDN7 264 aa7.81□□□□□ -1.16
TRAF4-213ENST00000578917 COA7Q96BR5 231 aa7.81□□□□□ -1.16
TRAF4-213ENST00000578917 P2RX7Q99572 595 aaKnown RBP7.81□□□□□ -1.16
TRAF4-213ENST00000578917 KIAA1683Q9H0B3 1180 aa7.81□□□□□ -1.16
TRAF4-213ENST00000578917 KANSL2Q9H9L4 492 aa7.81□□□□□ -1.16
TRAF4-213ENST00000578917 TOMM22Q9NS69 142 aa7.81□□□□□ -1.16
TRAF4-213ENST00000578917 HPS5Q9UPZ3 1129 aa7.81□□□□□ -1.16
TRAF4-213ENST00000578917 PTPN22Q9Y2R2 807 aa7.81□□□□□ -1.16
TRAF4-213ENST00000578917 SALL3Q9BXA9 1300 aa7.8□□□□□ -1.16
TRAF4-213ENST00000578917 TNPO2O14787 897 aaKnown RBP7.8□□□□□ -1.16
TRAF4-213ENST00000578917 PRDM1O75626 825 aa7.8□□□□□ -1.16
TRAF4-213ENST00000578917 MYCP01106 439 aaPredicted RBP7.8□□□□□ -1.16
TRAF4-213ENST00000578917 AKR1B1P15121 316 aa7.8□□□□□ -1.16
TRAF4-213ENST00000578917 SDSP20132 328 aa7.8□□□□□ -1.16
TRAF4-213ENST00000578917 NMIQ13287 307 aaPredicted RBP7.8□□□□□ -1.16
TRAF4-213ENST00000578917 SLC9C1Q4G0N8 1177 aa7.8□□□□□ -1.16
TRAF4-213ENST00000578917 CWC27Q6UX04 472 aaKnown RBP7.8□□□□□ -1.16
TRAF4-213ENST00000578917 GPRC5AQ8NFJ5 357 aa7.8□□□□□ -1.16
TRAF4-213ENST00000578917 FAM227BQ96M60 508 aa7.8□□□□□ -1.16
TRAF4-213ENST00000578917 PAGR1Q9BTK6 254 aa7.8□□□□□ -1.16
TRAF4-213ENST00000578917 TANGO6Q9C0B7 1094 aa7.8□□□□□ -1.16
TRAF4-213ENST00000578917 ARHGAP39Q9C0H5 1083 aa7.8□□□□□ -1.16
TRAF4-213ENST00000578917 OSBPL3Q9H4L5 887 aa7.8□□□□□ -1.16
TRAF4-213ENST00000578917 EMILIN3Q9NT22 766 aa7.8□□□□□ -1.16
TRAF4-213ENST00000578917 HOXC10Q9NYD6 342 aa7.8□□□□□ -1.16
TRAF4-213ENST00000578917 ISY1Q9ULR0 285 aaKnown RBP7.8□□□□□ -1.16
TRAF4-213ENST00000578917 THSD7BQ9C0I4 1608 aa7.8□□□□□ -1.16
TRAF4-213ENST00000578917 AKAP11Q9UKA4 1901 aa7.8□□□□□ -1.16
TRAF4-213ENST00000578917 SMIM22K7EJ46 135 aa7.79□□□□□ -1.16
TRAF4-213ENST00000578917 CENPBP07199 599 aaPredicted RBP7.79□□□□□ -1.16
TRAF4-213ENST00000578917 TSPY3P0CV98 308 aa7.79□□□□□ -1.16
TRAF4-213ENST00000578917 TSPY8P0CW00 308 aa7.79□□□□□ -1.16
TRAF4-213ENST00000578917 EEF2P13639 858 aaKnown RBP7.79□□□□□ -1.16
TRAF4-213ENST00000578917 HOXA7P31268 230 aaPredicted RBP7.79□□□□□ -1.16
TRAF4-213ENST00000578917 PRMT2P55345 433 aa7.79□□□□□ -1.16
TRAF4-213ENST00000578917 HERVK_113P62684 666 aa7.79□□□□□ -1.16
TRAF4-213ENST00000578917 PPARAQ07869 468 aa7.79□□□□□ -1.16
TRAF4-213ENST00000578917 COG2Q14746 738 aa7.79□□□□□ -1.16
TRAF4-213ENST00000578917 RRP12Q5JTH9 1297 aaKnown RBP7.79□□□□□ -1.16
TRAF4-213ENST00000578917 WDR78Q5VTH9 848 aa7.79□□□□□ -1.16
TRAF4-213ENST00000578917 SPICE1Q8N0Z3 855 aa7.79□□□□□ -1.16
TRAF4-213ENST00000578917 CCDC136Q96JN2 1154 aa7.79□□□□□ -1.16
TRAF4-213ENST00000578917 TRIM47Q96LD4 638 aa7.79□□□□□ -1.16
TRAF4-213ENST00000578917 TMEM106CQ9BVX2 250 aa7.79□□□□□ -1.16
TRAF4-213ENST00000578917 RPAP3Q9H6T3 665 aaPredicted RBP7.79□□□□□ -1.16
TRAF4-213ENST00000578917 GOPCQ9HD26 462 aa7.79□□□□□ -1.16
TRAF4-213ENST00000578917 CLIP2Q9UDT6 1046 aa7.79□□□□□ -1.16
TRAF4-213ENST00000578917 CTDP1Q9Y5B0 961 aaPredicted RBP7.79□□□□□ -1.16
TRAF4-213ENST00000578917 CASP8AP2Q9UKL3 1982 aa7.79□□□□□ -1.16
TRAF4-213ENST00000578917 A0A0D9SFI3 127 aa7.78□□□□□ -1.16
TRAF4-213ENST00000578917 A0A1W2PRG0 241 aa7.78□□□□□ -1.16
TRAF4-213ENST00000578917 TSPY2A6NKD2 308 aa7.78□□□□□ -1.16
TRAF4-213ENST00000578917 RANBP6O60518 1105 aaKnown RBP7.78□□□□□ -1.16
TRAF4-213ENST00000578917 FGAP02671 866 aa7.78□□□□□ -1.16
TRAF4-213ENST00000578917 BCRP11274 1271 aa7.78□□□□□ -1.16
TRAF4-213ENST00000578917 VCAM1P19320 739 aa7.78□□□□□ -1.16
TRAF4-213ENST00000578917 GUCY1A2P33402 732 aa7.78□□□□□ -1.16
TRAF4-213ENST00000578917 SOX10P56693 466 aa7.78□□□□□ -1.16
TRAF4-213ENST00000578917 CCNA1P78396 465 aa7.78□□□□□ -1.16
TRAF4-213ENST00000578917 TFAP4Q01664 338 aa7.78□□□□□ -1.16
TRAF4-213ENST00000578917 CTDSPL2Q05D32 466 aa7.78□□□□□ -1.16
TRAF4-213ENST00000578917 FAM110CQ1W6H9 321 aa7.78□□□□□ -1.16
TRAF4-213ENST00000578917 VPS53Q5VIR6 699 aa7.78□□□□□ -1.16
TRAF4-213ENST00000578917 CATSPERGQ6ZRH7 1159 aa7.78□□□□□ -1.16
TRAF4-213ENST00000578917 CLEC10AQ8IUN9 316 aa7.78□□□□□ -1.16
TRAF4-213ENST00000578917 GTF3C2Q8WUA4 911 aaPredicted RBP7.78□□□□□ -1.16
TRAF4-213ENST00000578917 RUFY2Q8WXA3 655 aa7.78□□□□□ -1.16
TRAF4-213ENST00000578917 LPAR1Q92633 364 aa7.78□□□□□ -1.16
TRAF4-213ENST00000578917 EPB41L4AQ9HCS5 686 aaPredicted RBP7.78□□□□□ -1.16
TRAF4-213ENST00000578917 SRRDQ9UH36 339 aa7.78□□□□□ -1.16
TRAF4-213ENST00000578917 TMX2Q9Y320 296 aa7.78□□□□□ -1.16
TRAF4-213ENST00000578917 PTCH2Q9Y6C5 1203 aa7.78□□□□□ -1.16
TRAF4-213ENST00000578917 CCDC171Q6TFL3 1326 aa7.78□□□□□ -1.16
TRAF4-213ENST00000578917 MYPNQ86TC9 1320 aa7.78□□□□□ -1.16
TRAF4-213ENST00000578917 ZNF213O14771 459 aa7.77□□□□□ -1.17
TRAF4-213ENST00000578917 FLOT1O75955 427 aa7.77□□□□□ -1.17
TRAF4-213ENST00000578917 HSPD1P10809 573 aaKnown RBP7.77□□□□□ -1.17
TRAF4-213ENST00000578917 RASA1P20936 1047 aa7.77□□□□□ -1.17
TRAF4-213ENST00000578917 PDE4AP27815 886 aa7.77□□□□□ -1.17
TRAF4-213ENST00000578917 HAND2P61296 217 aa7.77□□□□□ -1.17
TRAF4-213ENST00000578917 PLS1Q14651 629 aa7.77□□□□□ -1.17
TRAF4-213ENST00000578917 ALX1Q15699 326 aa7.77□□□□□ -1.17
TRAF4-213ENST00000578917 FAM47AQ5JRC9 791 aa7.77□□□□□ -1.17
TRAF4-213ENST00000578917 PPP4R3BQ5MIZ7 849 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms