RNA–Protein interactions for RNA: ENST00000578067.5

LIMD2-203, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 2,019 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-203ENST00000578067 USP17L1Q7RTZ2 530 aa31.97■■■□□ 2.71
LIMD2-203ENST00000578067 SRBD1Q8N5C6 995 aaKnown RBP31.97■■■□□ 2.71
LIMD2-203ENST00000578067 ZNF219Q9P2Y4 722 aaPredicted RBP31.97■■■□□ 2.71
LIMD2-203ENST00000578067 CNTNAP5Q8WYK1 1306 aa31.97■■■□□ 2.71
LIMD2-203ENST00000578067 CTAGE5O15320 804 aa31.97■■■□□ 2.71
LIMD2-203ENST00000578067 HHIPL2Q6UWX4 724 aa31.97■■■□□ 2.71
LIMD2-203ENST00000578067 PNMA1Q8ND90 353 aa31.97■■■□□ 2.71
LIMD2-203ENST00000578067 TYRO3Q06418 890 aa31.96■■■□□ 2.71
LIMD2-203ENST00000578067 C7orf43Q8WVR3 580 aa31.96■■■□□ 2.71
LIMD2-203ENST00000578067 PDLIM2Q96JY6 352 aa31.96■■■□□ 2.71
LIMD2-203ENST00000578067 KINO60870 393 aaKnown RBP31.95■■■□□ 2.71
LIMD2-203ENST00000578067 PPP6R2O75170 966 aa31.95■■■□□ 2.71
LIMD2-203ENST00000578067 PTPAQ15257 358 aa31.95■■■□□ 2.71
LIMD2-203ENST00000578067 TRIM44Q96DX7 344 aaPredicted RBP31.95■■■□□ 2.71
LIMD2-203ENST00000578067 FOCADQ5VW36 1801 aa31.95■■■□□ 2.71
LIMD2-203ENST00000578067 MYH6P13533 1939 aa31.95■■■□□ 2.7
LIMD2-203ENST00000578067 SCNN1DP51172 638 aa31.95■■■□□ 2.7
LIMD2-203ENST00000578067 AXDND1Q5T1B0 1012 aaPredicted RBP31.95■■■□□ 2.7
LIMD2-203ENST00000578067 JMYQ8N9B5 988 aa31.95■■■□□ 2.7
LIMD2-203ENST00000578067 TEKT1Q969V4 418 aa31.95■■■□□ 2.7
LIMD2-203ENST00000578067 VPS54Q9P1Q0 977 aa31.95■■■□□ 2.7
LIMD2-203ENST00000578067 MYH1P12882 1939 aa31.94■■■□□ 2.7
LIMD2-203ENST00000578067 hCG_1642624A0A1W2PR95 340 aa31.94■■■□□ 2.7
LIMD2-203ENST00000578067 FMR1NBQ8N0W7 255 aaPredicted RBP31.94■■■□□ 2.7
LIMD2-203ENST00000578067 USP40Q9NVE5 1235 aa31.94■■■□□ 2.7
LIMD2-203ENST00000578067 SNED1Q8TER0 1413 aa31.94■■■□□ 2.7
LIMD2-203ENST00000578067 FKBP1AP62942 108 aaKnown RBP31.93■■■□□ 2.7
LIMD2-203ENST00000578067 PICALMQ13492 652 aa31.93■■■□□ 2.7
LIMD2-203ENST00000578067 CC2D2BQ6DHV5 1058 aa31.93■■■□□ 2.7
LIMD2-203ENST00000578067 NEDD1Q8NHV4 660 aa31.93■■■□□ 2.7
LIMD2-203ENST00000578067 SHISA4Q96DD7 197 aa31.93■■■□□ 2.7
LIMD2-203ENST00000578067 PHF20Q9BVI0 1012 aa31.93■■■□□ 2.7
LIMD2-203ENST00000578067 KCNQ5Q9NR82 932 aa31.93■■■□□ 2.7
LIMD2-203ENST00000578067 A0A1B0GVL5 298 aa31.93■■■□□ 2.7
LIMD2-203ENST00000578067 RILPL1Q5EBL4 403 aa31.93■■■□□ 2.7
LIMD2-203ENST00000578067 STRIP1Q5VSL9 837 aa31.93■■■□□ 2.7
LIMD2-203ENST00000578067 MRVI1Q9Y6F6 885 aa31.93■■■□□ 2.7
LIMD2-203ENST00000578067 ECE2O60344 883 aa31.92■■■□□ 2.7
LIMD2-203ENST00000578067 MARCKSP29966 332 aaPredicted RBP31.92■■■□□ 2.7
LIMD2-203ENST00000578067 NR5A1Q13285 461 aa31.92■■■□□ 2.7
LIMD2-203ENST00000578067 SASS6Q6UVJ0 657 aa31.92■■■□□ 2.7
LIMD2-203ENST00000578067 WDHD1O75717 1129 aaPredicted RBP31.92■■■□□ 2.7
LIMD2-203ENST00000578067 CMA1P23946 247 aa31.92■■■□□ 2.7
LIMD2-203ENST00000578067 GRM4Q14833 912 aa31.92■■■□□ 2.7
LIMD2-203ENST00000578067 DEFB132Q7Z7B7 95 aa31.92■■■□□ 2.7
LIMD2-203ENST00000578067 OXER1Q8TDS5 423 aa31.92■■■□□ 2.7
LIMD2-203ENST00000578067 PDGFDQ9GZP0 370 aaPredicted RBP31.92■■■□□ 2.7
LIMD2-203ENST00000578067 EIF4ENIF1Q9NRA8 985 aaKnown RBP31.92■■■□□ 2.7
LIMD2-203ENST00000578067 NDUFA8P51970 172 aa31.91■■■□□ 2.7
LIMD2-203ENST00000578067 FBXO41Q8TF61 875 aa31.91■■■□□ 2.7
LIMD2-203ENST00000578067 TMEM47Q9BQJ4 181 aa31.91■■■□□ 2.7
LIMD2-203ENST00000578067 STX8Q9UNK0 236 aa31.91■■■□□ 2.7
LIMD2-203ENST00000578067 TOB1P50616 345 aaPredicted RBP31.9■■■□□ 2.7
LIMD2-203ENST00000578067 MRIQ9BWK5 157 aa31.9■■■□□ 2.7
LIMD2-203ENST00000578067 DDX4Q9NQI0 724 aaKnown RBP31.9■■■□□ 2.7
LIMD2-203ENST00000578067 KRT2P35908 639 aa31.9■■■□□ 2.7
LIMD2-203ENST00000578067 GNAQP50148 359 aa31.9■■■□□ 2.7
LIMD2-203ENST00000578067 APOBEC3HQ6NTF7 200 aaKnown RBP31.9■■■□□ 2.7
LIMD2-203ENST00000578067 CDC42EP5Q6NZY7 148 aa31.9■■■□□ 2.7
LIMD2-203ENST00000578067 CRKP46108 304 aa31.89■■■□□ 2.7
LIMD2-203ENST00000578067 DACT2Q5SW24 774 aa31.89■■■□□ 2.7
LIMD2-203ENST00000578067 SCG2P13521 617 aa31.88■■■□□ 2.69
LIMD2-203ENST00000578067 SUPT20HQ8NEM7 779 aa31.88■■■□□ 2.69
LIMD2-203ENST00000578067 PFKFB3Q16875 520 aaPredicted RBP31.88■■■□□ 2.69
LIMD2-203ENST00000578067 FAM200AQ8TCP9 573 aa31.88■■■□□ 2.69
LIMD2-203ENST00000578067 BRMS1Q9HCU9 246 aa31.88■■■□□ 2.69
LIMD2-203ENST00000578067 MAD2L2Q9UI95 211 aa31.88■■■□□ 2.69
LIMD2-203ENST00000578067 C10orf71Q711Q0 1435 aa31.87■■■□□ 2.69
LIMD2-203ENST00000578067 GABPAQ06546 454 aa31.87■■■□□ 2.69
LIMD2-203ENST00000578067 KIAA2012Q0VF49 1180 aa31.87■■■□□ 2.69
LIMD2-203ENST00000578067 AOC3Q16853 763 aa31.87■■■□□ 2.69
LIMD2-203ENST00000578067 ZDHHC15Q96MV8 337 aa31.87■■■□□ 2.69
LIMD2-203ENST00000578067 STAG2Q8N3U4 1231 aa31.87■■■□□ 2.69
LIMD2-203ENST00000578067 CUTAO60888 179 aa31.86■■■□□ 2.69
LIMD2-203ENST00000578067 ANO6Q4KMQ2 910 aa31.86■■■□□ 2.69
LIMD2-203ENST00000578067 KIAA0825Q8IV33 1275 aa31.86■■■□□ 2.69
LIMD2-203ENST00000578067 FAM43AQ8N2R8 423 aa31.86■■■□□ 2.69
LIMD2-203ENST00000578067 CABP5Q9NP86 173 aa31.86■■■□□ 2.69
LIMD2-203ENST00000578067 HDLBPQ00341 1268 aaKnown RBP31.85■■■□□ 2.69
LIMD2-203ENST00000578067 OSBPL5Q9H0X9 879 aaPredicted RBP31.85■■■□□ 2.69
LIMD2-203ENST00000578067 ADAMTSL1Q8N6G6 1762 aa31.85■■■□□ 2.69
LIMD2-203ENST00000578067 PFKFB1P16118 471 aa31.85■■■□□ 2.69
LIMD2-203ENST00000578067 NOVP48745 357 aa31.84■■■□□ 2.69
LIMD2-203ENST00000578067 SDF4Q9BRK5 362 aa31.84■■■□□ 2.69
LIMD2-203ENST00000578067 C21orf2O43822 256 aa31.83■■■□□ 2.69
LIMD2-203ENST00000578067 SLC16A10Q8TF71 515 aa31.83■■■□□ 2.69
LIMD2-203ENST00000578067 CEP95Q96GE4 821 aa31.83■■■□□ 2.69
LIMD2-203ENST00000578067 PALM3A6NDB9 673 aaPredicted RBP31.83■■■□□ 2.69
LIMD2-203ENST00000578067 ZNF202O95125 648 aa31.83■■■□□ 2.69
LIMD2-203ENST00000578067 TOP1P11387 765 aaKnown RBP31.83■■■□□ 2.69
LIMD2-203ENST00000578067 NPY5RQ15761 445 aa31.83■■■□□ 2.69
LIMD2-203ENST00000578067 GRIPAP1Q4V328 841 aa31.83■■■□□ 2.69
LIMD2-203ENST00000578067 SHC4Q6S5L8 630 aa31.83■■■□□ 2.69
LIMD2-203ENST00000578067 KRI1Q8N9T8 703 aaKnown RBP31.83■■■□□ 2.69
LIMD2-203ENST00000578067 PIBF1Q8WXW3 757 aa31.83■■■□□ 2.69
LIMD2-203ENST00000578067 LZTS2Q9BRK4 669 aa31.83■■■□□ 2.69
LIMD2-203ENST00000578067 SWAP70Q9UH65 585 aa31.83■■■□□ 2.69
LIMD2-203ENST00000578067 USP25Q9UHP3 1055 aa31.83■■■□□ 2.69
LIMD2-203ENST00000578067 SERPINB13Q9UIV8 391 aa31.83■■■□□ 2.69
LIMD2-203ENST00000578067 CEP131Q9UPN4 1083 aa31.83■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms