RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 OGDHLQ9ULD0 1010 aa19.38■□□□□ 0.69
VAPA-204ENST00000577901 CDK5RAP2Q96SN8 1893 aa19.37■□□□□ 0.69
VAPA-204ENST00000577901 PRKAR2AP13861 404 aaKnown RBP19.37■□□□□ 0.69
VAPA-204ENST00000577901 ATP5JP18859 108 aa19.37■□□□□ 0.69
VAPA-204ENST00000577901 ERVK-9P63128 1117 aa19.37■□□□□ 0.69
VAPA-204ENST00000577901 ERVK-24P63145 666 aa19.37■□□□□ 0.69
VAPA-204ENST00000577901 HDAC1Q13547 482 aaPredicted RBP19.37■□□□□ 0.69
VAPA-204ENST00000577901 MAP3K21Q5TCX8 1036 aa19.37■□□□□ 0.69
VAPA-204ENST00000577901 TMED8Q6PL24 325 aaPredicted RBP19.37■□□□□ 0.69
VAPA-204ENST00000577901 USP17L2Q6R6M4 530 aa19.37■□□□□ 0.69
VAPA-204ENST00000577901 CCAR1Q8IX12 1150 aaKnown RBP19.37■□□□□ 0.69
VAPA-204ENST00000577901 C11orf49Q9H6J7 331 aa19.37■□□□□ 0.69
VAPA-204ENST00000577901 ZBTB47Q9UFB7 747 aaPredicted RBP19.37■□□□□ 0.69
VAPA-204ENST00000577901 NDUFB9Q9Y6M9 179 aa19.37■□□□□ 0.69
VAPA-204ENST00000577901 ALPK3Q96L96 1907 aa19.36■□□□□ 0.69
VAPA-204ENST00000577901 SOX1O00570 391 aaPredicted RBP19.36■□□□□ 0.69
VAPA-204ENST00000577901 GH2P01242 217 aa19.36■□□□□ 0.69
VAPA-204ENST00000577901 USP5P45974 858 aa19.36■□□□□ 0.69
VAPA-204ENST00000577901 Q3C1V9 767 aa19.36■□□□□ 0.69
VAPA-204ENST00000577901 TRMT44Q8IYL2 757 aaKnown RBP19.36■□□□□ 0.69
VAPA-204ENST00000577901 MIGA1Q8NAN2 632 aa19.36■□□□□ 0.69
VAPA-204ENST00000577901 GTF3C2Q8WUA4 911 aaPredicted RBP19.36■□□□□ 0.69
VAPA-204ENST00000577901 GPATCH3Q96I76 525 aa19.36■□□□□ 0.69
VAPA-204ENST00000577901 PAGR1Q9BTK6 254 aa19.36■□□□□ 0.69
VAPA-204ENST00000577901 PORCNQ9H237 461 aa19.36■□□□□ 0.69
VAPA-204ENST00000577901 ANTXR1Q9H6X2 564 aa19.36■□□□□ 0.69
VAPA-204ENST00000577901 ZMYND8Q9ULU4 1186 aaPredicted RBP19.36■□□□□ 0.69
VAPA-204ENST00000577901 ZKSCAN1P17029 563 aaPredicted RBP19.35■□□□□ 0.69
VAPA-204ENST00000577901 POTEEQ6S8J3 1075 aa19.35■□□□□ 0.69
VAPA-204ENST00000577901 CERS3Q8IU89 383 aa19.35■□□□□ 0.69
VAPA-204ENST00000577901 EXOC6Q8TAG9 804 aa19.35■□□□□ 0.69
VAPA-204ENST00000577901 USP6NLQ92738 828 aa19.35■□□□□ 0.69
VAPA-204ENST00000577901 DNAJC2Q99543 621 aaKnown RBP19.35■□□□□ 0.69
VAPA-204ENST00000577901 GDF15Q99988 308 aa19.35■□□□□ 0.69
VAPA-204ENST00000577901 BOLA2Q9H3K6 86 aa19.35■□□□□ 0.69
VAPA-204ENST00000577901 ECHDC1Q9NTX5 307 aa19.35■□□□□ 0.69
VAPA-204ENST00000577901 GOLIM4O00461 696 aa19.34■□□□□ 0.69
VAPA-204ENST00000577901 BMP8BP34820 402 aa19.34■□□□□ 0.69
VAPA-204ENST00000577901 RGS2P41220 211 aa19.34■□□□□ 0.69
VAPA-204ENST00000577901 CACNB2Q08289 660 aaPredicted RBP19.34■□□□□ 0.69
VAPA-204ENST00000577901 TATDN1Q6P1N9 297 aa19.34■□□□□ 0.69
VAPA-204ENST00000577901 GPR142Q7Z601 462 aa19.34■□□□□ 0.69
VAPA-204ENST00000577901 PLEKHH3Q7Z736 793 aa19.34■□□□□ 0.69
VAPA-204ENST00000577901 MAGEB6Q8N7X4 407 aa19.34■□□□□ 0.69
VAPA-204ENST00000577901 LRCH3Q96II8 777 aa19.34■□□□□ 0.69
VAPA-204ENST00000577901 FEZ1Q99689 392 aa19.34■□□□□ 0.69
VAPA-204ENST00000577901 RWDD1Q9H446 243 aaPredicted RBP19.34■□□□□ 0.69
VAPA-204ENST00000577901 MYO5AQ9Y4I1 1855 aaKnown RBP19.34■□□□□ 0.69
VAPA-204ENST00000577901 DDX60LQ5H9U9 1706 aaKnown RBP19.34■□□□□ 0.69
VAPA-204ENST00000577901 ZYXQ15942 572 aaKnown RBP19.33■□□□□ 0.68
VAPA-204ENST00000577901 MORN1Q5T089 497 aa19.33■□□□□ 0.68
VAPA-204ENST00000577901 C12orf42Q96LP6 360 aa19.33■□□□□ 0.68
VAPA-204ENST00000577901 HAUS7Q99871 368 aa19.33■□□□□ 0.68
VAPA-204ENST00000577901 EHD4Q9H223 541 aa19.33■□□□□ 0.68
VAPA-204ENST00000577901 CWC22Q9HCG8 908 aaKnown RBP19.33■□□□□ 0.68
VAPA-204ENST00000577901 PAG1Q9NWQ8 432 aa19.33■□□□□ 0.68
VAPA-204ENST00000577901 SERPINB13Q9UIV8 391 aa19.33■□□□□ 0.68
VAPA-204ENST00000577901 USP17L15C9J2P7 530 aa19.32■□□□□ 0.68
VAPA-204ENST00000577901 USP17L13C9JLJ4 530 aa19.32■□□□□ 0.68
VAPA-204ENST00000577901 USP17L11C9JVI0 530 aa19.32■□□□□ 0.68
VAPA-204ENST00000577901 USP17L18D6R9N7 530 aa19.32■□□□□ 0.68
VAPA-204ENST00000577901 USP17L22D6RA61 530 aa19.32■□□□□ 0.68
VAPA-204ENST00000577901 USP17L17D6RBQ6 530 aa19.32■□□□□ 0.68
VAPA-204ENST00000577901 USP17L19D6RCP7 530 aa19.32■□□□□ 0.68
VAPA-204ENST00000577901 USP17L20D6RJB6 530 aa19.32■□□□□ 0.68
VAPA-204ENST00000577901 SYN1P17600 705 aa19.32■□□□□ 0.68
VAPA-204ENST00000577901 USP17L24Q0WX57 530 aa19.32■□□□□ 0.68
VAPA-204ENST00000577901 RAB3GAP1Q15042 981 aa19.32■□□□□ 0.68
VAPA-204ENST00000577901 CCL14Q16627 93 aa19.32■□□□□ 0.68
VAPA-204ENST00000577901 ANKRD45Q5TZF3 282 aa19.32■□□□□ 0.68
VAPA-204ENST00000577901 APBA2Q99767 749 aa19.32■□□□□ 0.68
VAPA-204ENST00000577901 PFASO15067 1338 aa19.31■□□□□ 0.68
VAPA-204ENST00000577901 COL6A3P12111 3177 aa19.31■□□□□ 0.68
VAPA-204ENST00000577901 CCND3P30281 292 aaPredicted RBP19.31■□□□□ 0.68
VAPA-204ENST00000577901 CERKLQ49MI3 558 aaPredicted RBP19.31■□□□□ 0.68
VAPA-204ENST00000577901 SLC9C2Q5TAH2 1124 aa19.31■□□□□ 0.68
VAPA-204ENST00000577901 TTC6Q86TZ1 520 aa19.31■□□□□ 0.68
VAPA-204ENST00000577901 KIAA1683Q9H0B3 1180 aa19.31■□□□□ 0.68
VAPA-204ENST00000577901 RABGAP1Q9Y3P9 1069 aa19.31■□□□□ 0.68
VAPA-204ENST00000577901 CNMDO75829 334 aa19.3■□□□□ 0.68
VAPA-204ENST00000577901 GLRX3O76003 335 aaKnown RBP19.3■□□□□ 0.68
VAPA-204ENST00000577901 USP14P54578 494 aa19.3■□□□□ 0.68
VAPA-204ENST00000577901 CCNA1P78396 465 aa19.3■□□□□ 0.68
VAPA-204ENST00000577901 MAP2K5Q13163 448 aa19.3■□□□□ 0.68
VAPA-204ENST00000577901 ABCB5Q2M3G0 1257 aa19.3■□□□□ 0.68
VAPA-204ENST00000577901 LHX8Q68G74 356 aa19.3■□□□□ 0.68
VAPA-204ENST00000577901 CATSPERGQ6ZRH7 1159 aa19.3■□□□□ 0.68
VAPA-204ENST00000577901 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.3■□□□□ 0.68
VAPA-204ENST00000577901 COL6A1P12109 1028 aa19.29■□□□□ 0.68
VAPA-204ENST00000577901 VCAM1P19320 739 aa19.29■□□□□ 0.68
VAPA-204ENST00000577901 MAGEA10P43363 369 aaPredicted RBP19.29■□□□□ 0.68
VAPA-204ENST00000577901 ACER1Q8TDN7 264 aa19.29■□□□□ 0.68
VAPA-204ENST00000577901 EDC3Q96F86 508 aaKnown RBP19.29■□□□□ 0.68
VAPA-204ENST00000577901 CABP5Q9NP86 173 aa19.29■□□□□ 0.68
VAPA-204ENST00000577901 MYH1P12882 1939 aa19.29■□□□□ 0.68
VAPA-204ENST00000577901 TTC41PQ6P2S7 1318 aa19.28■□□□□ 0.68
VAPA-204ENST00000577901 ERC2O15083 957 aa19.28■□□□□ 0.68
VAPA-204ENST00000577901 PDE6AP16499 860 aa19.28■□□□□ 0.68
VAPA-204ENST00000577901 SHMT1P34896 483 aa19.28■□□□□ 0.68
VAPA-204ENST00000577901 PLCD1P51178 756 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms