RNA–Protein interactions for RNA: ENST00000577435.5

GGA3-203, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-203ENST00000577435 GCLCP48506 637 aaPredicted RBP16.71■□□□□ 0.27
GGA3-203ENST00000577435 SEPT2Q15019 361 aa16.71■□□□□ 0.27
GGA3-203ENST00000577435 NACAP1Q9BZK3 213 aa16.71■□□□□ 0.27
GGA3-203ENST00000577435 ASCC2Q9H1I8 757 aaPredicted RBP16.71■□□□□ 0.27
GGA3-203ENST00000577435 ROBO3Q96MS0 1386 aa16.7■□□□□ 0.26
GGA3-203ENST00000577435 CCDC85CA6NKD9 419 aa16.7■□□□□ 0.26
GGA3-203ENST00000577435 TRIM6-TRIM34B2RNG4 842 aa16.7■□□□□ 0.26
GGA3-203ENST00000577435 APPP05067 770 aa16.7■□□□□ 0.26
GGA3-203ENST00000577435 PRMT2P55345 433 aa16.7■□□□□ 0.26
GGA3-203ENST00000577435 ACER1Q8TDN7 264 aa16.7■□□□□ 0.26
GGA3-203ENST00000577435 SMCR8Q8TEV9 937 aaPredicted RBP16.7■□□□□ 0.26
GGA3-203ENST00000577435 ARHGAP39Q9C0H5 1083 aa16.7■□□□□ 0.26
GGA3-203ENST00000577435 MGAMO43451 1857 aa16.69■□□□□ 0.26
GGA3-203ENST00000577435 MPHOSPH10O00566 681 aaKnown RBP16.69■□□□□ 0.26
GGA3-203ENST00000577435 AKR1B1P15121 316 aa16.69■□□□□ 0.26
GGA3-203ENST00000577435 PSMC4P43686 418 aa16.69■□□□□ 0.26
GGA3-203ENST00000577435 TDO2P48775 406 aa16.69■□□□□ 0.26
GGA3-203ENST00000577435 MCMDC2Q4G0Z9 681 aa16.69■□□□□ 0.26
GGA3-203ENST00000577435 SIAH1Q8IUQ4 282 aa16.69■□□□□ 0.26
GGA3-203ENST00000577435 KIAA0100Q14667 2235 aaKnown RBP16.68■□□□□ 0.26
GGA3-203ENST00000577435 A0A1W2PRG0 241 aa16.68■□□□□ 0.26
GGA3-203ENST00000577435 MINDY4BA8MYZ0 360 aa16.68■□□□□ 0.26
GGA3-203ENST00000577435 FOXP2O15409 715 aa16.68■□□□□ 0.26
GGA3-203ENST00000577435 PDE4AP27815 886 aa16.68■□□□□ 0.26
GGA3-203ENST00000577435 HOXD10P28358 340 aa16.68■□□□□ 0.26
GGA3-203ENST00000577435 CTGFP29279 349 aa16.68■□□□□ 0.26
GGA3-203ENST00000577435 IRX3P78415 501 aaPredicted RBP16.68■□□□□ 0.26
GGA3-203ENST00000577435 ALX1Q15699 326 aa16.68■□□□□ 0.26
GGA3-203ENST00000577435 FAM110CQ1W6H9 321 aa16.68■□□□□ 0.26
GGA3-203ENST00000577435 RILPL2Q969X0 211 aa16.68■□□□□ 0.26
GGA3-203ENST00000577435 P2RX7Q99572 595 aaKnown RBP16.68■□□□□ 0.26
GGA3-203ENST00000577435 FEZ1Q99689 392 aa16.68■□□□□ 0.26
GGA3-203ENST00000577435 KANSL2Q9H9L4 492 aa16.68■□□□□ 0.26
GGA3-203ENST00000577435 ZNF287Q9HBT7 754 aa16.68■□□□□ 0.26
GGA3-203ENST00000577435 CENPFP49454 3210 aa16.68■□□□□ 0.26
GGA3-203ENST00000577435 USP17L15C9J2P7 530 aa16.67■□□□□ 0.26
GGA3-203ENST00000577435 USP17L13C9JLJ4 530 aa16.67■□□□□ 0.26
GGA3-203ENST00000577435 USP17L11C9JVI0 530 aa16.67■□□□□ 0.26
GGA3-203ENST00000577435 USP17L18D6R9N7 530 aa16.67■□□□□ 0.26
GGA3-203ENST00000577435 USP17L22D6RA61 530 aa16.67■□□□□ 0.26
GGA3-203ENST00000577435 USP17L17D6RBQ6 530 aa16.67■□□□□ 0.26
GGA3-203ENST00000577435 USP17L19D6RCP7 530 aa16.67■□□□□ 0.26
GGA3-203ENST00000577435 USP17L20D6RJB6 530 aa16.67■□□□□ 0.26
GGA3-203ENST00000577435 SDSP20132 328 aa16.67■□□□□ 0.26
GGA3-203ENST00000577435 RASA1P20936 1047 aa16.67■□□□□ 0.26
GGA3-203ENST00000577435 USP17L24Q0WX57 530 aa16.67■□□□□ 0.26
GGA3-203ENST00000577435 CATSPERGQ6ZRH7 1159 aa16.67■□□□□ 0.26
GGA3-203ENST00000577435 CCDC129Q6ZRS4 1044 aa16.67■□□□□ 0.26
GGA3-203ENST00000577435 GTF3C2Q8WUA4 911 aaPredicted RBP16.67■□□□□ 0.26
GGA3-203ENST00000577435 TRIM47Q96LD4 638 aa16.67■□□□□ 0.26
GGA3-203ENST00000577435 FAM227BQ96M60 508 aa16.67■□□□□ 0.26
GGA3-203ENST00000577435 NAPBQ9H115 298 aa16.67■□□□□ 0.26
GGA3-203ENST00000577435 MORF4L1Q9UBU8 362 aa16.67■□□□□ 0.26
GGA3-203ENST00000577435 TMX2Q9Y320 296 aa16.67■□□□□ 0.26
GGA3-203ENST00000577435 GREB1LQ9C091 1923 aaPredicted RBP16.66■□□□□ 0.26
GGA3-203ENST00000577435 ZSWIM8A7E2V4 1837 aa16.66■□□□□ 0.26
GGA3-203ENST00000577435 A0A0D9SFI3 127 aa16.66■□□□□ 0.26
GGA3-203ENST00000577435 RGS19P49795 217 aa16.66■□□□□ 0.26
GGA3-203ENST00000577435 FCGRTP55899 365 aa16.66■□□□□ 0.26
GGA3-203ENST00000577435 NMIQ13287 307 aaPredicted RBP16.66■□□□□ 0.26
GGA3-203ENST00000577435 ANKRD13CQ8N6S4 541 aa16.66■□□□□ 0.26
GGA3-203ENST00000577435 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.66■□□□□ 0.26
GGA3-203ENST00000577435 MKNK2Q9HBH9 465 aa16.66■□□□□ 0.26
GGA3-203ENST00000577435 SRRDQ9UH36 339 aa16.66■□□□□ 0.26
GGA3-203ENST00000577435 HIP1O00291 1037 aa16.65■□□□□ 0.26
GGA3-203ENST00000577435 FMNL1O95466 1100 aaPredicted RBP16.65■□□□□ 0.26
GGA3-203ENST00000577435 SLC3A2P08195 630 aaKnown RBP16.65■□□□□ 0.26
GGA3-203ENST00000577435 VCAM1P19320 739 aa16.65■□□□□ 0.26
GGA3-203ENST00000577435 HERVK_113P62684 666 aa16.65■□□□□ 0.26
GGA3-203ENST00000577435 ICA1Q05084 483 aa16.65■□□□□ 0.26
GGA3-203ENST00000577435 PPARAQ07869 468 aa16.65■□□□□ 0.26
GGA3-203ENST00000577435 ZYXQ15942 572 aaKnown RBP16.65■□□□□ 0.26
GGA3-203ENST00000577435 LPAR1Q92633 364 aa16.65■□□□□ 0.26
GGA3-203ENST00000577435 ARMC5Q96C12 935 aa16.65■□□□□ 0.26
GGA3-203ENST00000577435 SH2D4AQ9H788 454 aa16.65■□□□□ 0.26
GGA3-203ENST00000577435 ARHGEF10LQ9HCE6 1279 aa16.65■□□□□ 0.26
GGA3-203ENST00000577435 ANAPC4Q9UJX5 808 aa16.65■□□□□ 0.26
GGA3-203ENST00000577435 PDE4BQ07343 736 aa16.64■□□□□ 0.25
GGA3-203ENST00000577435 TTC22Q5TAA0 569 aa16.64■□□□□ 0.25
GGA3-203ENST00000577435 VPS53Q5VIR6 699 aa16.64■□□□□ 0.25
GGA3-203ENST00000577435 LBX2Q6XYB7 198 aa16.64■□□□□ 0.25
GGA3-203ENST00000577435 ZNF444Q8N0Y2 327 aaPredicted RBP16.64■□□□□ 0.25
GGA3-203ENST00000577435 RBPJLQ9UBG7 517 aa16.64■□□□□ 0.25
GGA3-203ENST00000577435 PTCH2Q9Y6C5 1203 aa16.64■□□□□ 0.25
GGA3-203ENST00000577435 IGKV6D-41A0A0C4DH26 115 aa16.63■□□□□ 0.25
GGA3-203ENST00000577435 FGAP02671 866 aa16.63■□□□□ 0.25
GGA3-203ENST00000577435 HSPD1P10809 573 aaKnown RBP16.63■□□□□ 0.25
GGA3-203ENST00000577435 EEF2P13639 858 aaKnown RBP16.63■□□□□ 0.25
GGA3-203ENST00000577435 MFAP1P55081 439 aaKnown RBP16.63■□□□□ 0.25
GGA3-203ENST00000577435 POTEEQ6S8J3 1075 aa16.63■□□□□ 0.25
GGA3-203ENST00000577435 NBPF11Q86T75 865 aa16.63■□□□□ 0.25
GGA3-203ENST00000577435 ZNF589Q86UQ0 364 aaPredicted RBP16.63■□□□□ 0.25
GGA3-203ENST00000577435 GPRC5AQ8NFJ5 357 aa16.63■□□□□ 0.25
GGA3-203ENST00000577435 VCPKMTQ9H867 229 aa16.63■□□□□ 0.25
GGA3-203ENST00000577435 NYAP2Q9P242 653 aa16.63■□□□□ 0.25
GGA3-203ENST00000577435 RABGAP1Q9Y3P9 1069 aa16.63■□□□□ 0.25
GGA3-203ENST00000577435 ZMYM6O95789 1325 aa16.63■□□□□ 0.25
GGA3-203ENST00000577435 CCDC171Q6TFL3 1326 aa16.63■□□□□ 0.25
GGA3-203ENST00000577435 FGRP09769 529 aa16.62■□□□□ 0.25
GGA3-203ENST00000577435 KIAA1755Q5JYT7 1200 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms