RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 RASA1P20936 1047 aa18.06■□□□□ 0.48
LITAF-217ENST00000575426 USP14P54578 494 aa18.06■□□□□ 0.48
LITAF-217ENST00000575426 PABPC4Q13310 644 aaKnown RBP eCLIP18.06■□□□□ 0.48
LITAF-217ENST00000575426 SH3D19Q5HYK7 790 aa18.06■□□□□ 0.48
LITAF-217ENST00000575426 USP17L2Q6R6M4 530 aa18.06■□□□□ 0.48
LITAF-217ENST00000575426 CFHR5Q9BXR6 569 aa18.06■□□□□ 0.48
LITAF-217ENST00000575426 ARHGEF10LQ9HCE6 1279 aa18.06■□□□□ 0.48
LITAF-217ENST00000575426 PRDM10Q9NQV6 1147 aa18.06■□□□□ 0.48
LITAF-217ENST00000575426 ANAPC4Q9UJX5 808 aa18.06■□□□□ 0.48
LITAF-217ENST00000575426 LAMA4Q16363 1823 aa18.06■□□□□ 0.48
LITAF-217ENST00000575426 ZNF213O14771 459 aa18.05■□□□□ 0.48
LITAF-217ENST00000575426 PRDM1O75626 825 aa18.05■□□□□ 0.48
LITAF-217ENST00000575426 GUCY1A2P33402 732 aa18.05■□□□□ 0.48
LITAF-217ENST00000575426 ICA1Q05084 483 aa18.05■□□□□ 0.48
LITAF-217ENST00000575426 KIAA1211Q6ZU35 1233 aa18.05■□□□□ 0.48
LITAF-217ENST00000575426 SH2D4AQ9H788 454 aa18.05■□□□□ 0.48
LITAF-217ENST00000575426 KANSL2Q9H9L4 492 aa18.05■□□□□ 0.48
LITAF-217ENST00000575426 TOMM22Q9NS69 142 aa18.05■□□□□ 0.48
LITAF-217ENST00000575426 AGTPBP1Q9UPW5 1226 aa18.05■□□□□ 0.48
LITAF-217ENST00000575426 SGSM2O43147 1006 aa18.04■□□□□ 0.48
LITAF-217ENST00000575426 TSPY3P0CV98 308 aa18.04■□□□□ 0.48
LITAF-217ENST00000575426 TSPY8P0CW00 308 aa18.04■□□□□ 0.48
LITAF-217ENST00000575426 HAND2P61296 217 aa18.04■□□□□ 0.48
LITAF-217ENST00000575426 ATP2B2Q01814 1243 aa18.04■□□□□ 0.48
LITAF-217ENST00000575426 CRHR2Q13324 411 aa18.04■□□□□ 0.48
LITAF-217ENST00000575426 MOGSQ13724 837 aa18.04■□□□□ 0.48
LITAF-217ENST00000575426 ZYXQ15942 572 aaKnown RBP18.04■□□□□ 0.48
LITAF-217ENST00000575426 IMMTQ16891 758 aaKnown RBP18.04■□□□□ 0.48
LITAF-217ENST00000575426 GPAT2Q6NUI2 795 aa18.04■□□□□ 0.48
LITAF-217ENST00000575426 PARK7Q99497 189 aaKnown RBP18.04■□□□□ 0.48
LITAF-217ENST00000575426 PNMA3Q9UL41 463 aa18.04■□□□□ 0.48
LITAF-217ENST00000575426 SLC45A1Q9Y2W3 748 aa18.04■□□□□ 0.48
LITAF-217ENST00000575426 GREB1LQ9C091 1923 aaPredicted RBP18.04■□□□□ 0.48
LITAF-217ENST00000575426 TSPY2A6NKD2 308 aa18.03■□□□□ 0.48
LITAF-217ENST00000575426 GPR25O00155 361 aa18.03■□□□□ 0.48
LITAF-217ENST00000575426 OSBPP22059 807 aa18.03■□□□□ 0.48
LITAF-217ENST00000575426 TFAP4Q01664 338 aa18.03■□□□□ 0.48
LITAF-217ENST00000575426 MFSD6Q6ZSS7 791 aa18.03■□□□□ 0.48
LITAF-217ENST00000575426 ACER1Q8TDN7 264 aa18.03■□□□□ 0.48
LITAF-217ENST00000575426 KIAA1683Q9H0B3 1180 aa18.03■□□□□ 0.48
LITAF-217ENST00000575426 RNF41Q9H4P4 317 aaPredicted RBP18.03■□□□□ 0.48
LITAF-217ENST00000575426 RANBP6O60518 1105 aaKnown RBP18.02■□□□□ 0.48
LITAF-217ENST00000575426 CDC45O75419 566 aa18.02■□□□□ 0.48
LITAF-217ENST00000575426 PCP11498 1178 aaKnown RBP18.02■□□□□ 0.48
LITAF-217ENST00000575426 NOM1Q5C9Z4 860 aaKnown RBP18.02■□□□□ 0.48
LITAF-217ENST00000575426 RRP12Q5JTH9 1297 aaKnown RBP18.02■□□□□ 0.48
LITAF-217ENST00000575426 IL25Q9H293 177 aa18.02■□□□□ 0.48
LITAF-217ENST00000575426 TLR2O60603 784 aa18.01■□□□□ 0.47
LITAF-217ENST00000575426 FKTNO75072 461 aa18.01■□□□□ 0.47
LITAF-217ENST00000575426 EEF2P13639 858 aaKnown RBP18.01■□□□□ 0.47
LITAF-217ENST00000575426 IRX3P78415 501 aaPredicted RBP18.01■□□□□ 0.47
LITAF-217ENST00000575426 FAM47AQ5JRC9 791 aa18.01■□□□□ 0.47
LITAF-217ENST00000575426 PPP4R3BQ5MIZ7 849 aa18.01■□□□□ 0.47
LITAF-217ENST00000575426 AKNAD1Q5T1N1 836 aa18.01■□□□□ 0.47
LITAF-217ENST00000575426 TREML2Q5T2D2 321 aa18.01■□□□□ 0.47
LITAF-217ENST00000575426 NEDD1Q8NHV4 660 aa18.01■□□□□ 0.47
LITAF-217ENST00000575426 ESYT1Q9BSJ8 1104 aa18.01■□□□□ 0.47
LITAF-217ENST00000575426 R3HDMLQ9H3Y0 253 aa18.01■□□□□ 0.47
LITAF-217ENST00000575426 EMILIN3Q9NT22 766 aa18.01■□□□□ 0.47
LITAF-217ENST00000575426 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.01■□□□□ 0.47
LITAF-217ENST00000575426 U3KPZ7 1027 aaPredicted RBP18.01■□□□□ 0.47
LITAF-217ENST00000575426 ORC4O43929 436 aa18■□□□□ 0.47
LITAF-217ENST00000575426 DGKZQ13574 1117 aa18■□□□□ 0.47
LITAF-217ENST00000575426 SMCR8Q8TEV9 937 aaPredicted RBP18■□□□□ 0.47
LITAF-217ENST00000575426 ZNF296Q8WUU4 475 aaPredicted RBP18■□□□□ 0.47
LITAF-217ENST00000575426 STAG1Q8WVM7 1258 aa18■□□□□ 0.47
LITAF-217ENST00000575426 C12orf42Q96LP6 360 aa18■□□□□ 0.47
LITAF-217ENST00000575426 INCENPQ9NQS7 918 aa18■□□□□ 0.47
LITAF-217ENST00000575426 NYAP2Q9P242 653 aa18■□□□□ 0.47
LITAF-217ENST00000575426 TMX2Q9Y320 296 aa18■□□□□ 0.47
LITAF-217ENST00000575426 A0A1W2PRG0 241 aa17.99■□□□□ 0.47
LITAF-217ENST00000575426 RAD21O60216 631 aa17.99■□□□□ 0.47
LITAF-217ENST00000575426 FGRP09769 529 aa17.99■□□□□ 0.47
LITAF-217ENST00000575426 CYP2C8P10632 490 aa17.99■□□□□ 0.47
LITAF-217ENST00000575426 SP3Q02447 781 aa17.99■□□□□ 0.47
LITAF-217ENST00000575426 PTH1RQ03431 593 aa17.99■□□□□ 0.47
LITAF-217ENST00000575426 CLEC10AQ8IUN9 316 aa17.99■□□□□ 0.47
LITAF-217ENST00000575426 GOPCQ9HD26 462 aa17.99■□□□□ 0.47
LITAF-217ENST00000575426 CLIP2Q9UDT6 1046 aa17.99■□□□□ 0.47
LITAF-217ENST00000575426 USP17L15C9J2P7 530 aa17.98■□□□□ 0.47
LITAF-217ENST00000575426 USP17L13C9JLJ4 530 aa17.98■□□□□ 0.47
LITAF-217ENST00000575426 USP17L11C9JVI0 530 aa17.98■□□□□ 0.47
LITAF-217ENST00000575426 USP17L18D6R9N7 530 aa17.98■□□□□ 0.47
LITAF-217ENST00000575426 USP17L22D6RA61 530 aa17.98■□□□□ 0.47
LITAF-217ENST00000575426 USP17L17D6RBQ6 530 aa17.98■□□□□ 0.47
LITAF-217ENST00000575426 USP17L19D6RCP7 530 aa17.98■□□□□ 0.47
LITAF-217ENST00000575426 USP17L20D6RJB6 530 aa17.98■□□□□ 0.47
LITAF-217ENST00000575426 TTLL1O95922 423 aa17.98■□□□□ 0.47
LITAF-217ENST00000575426 HOXA7P31268 230 aaPredicted RBP17.98■□□□□ 0.47
LITAF-217ENST00000575426 USP17L24Q0WX57 530 aa17.98■□□□□ 0.47
LITAF-217ENST00000575426 KIF22Q14807 665 aa17.98■□□□□ 0.47
LITAF-217ENST00000575426 ARHGEF6Q15052 776 aa17.98■□□□□ 0.47
LITAF-217ENST00000575426 SIAH1Q8IUQ4 282 aa17.98■□□□□ 0.47
LITAF-217ENST00000575426 LPAR1Q92633 364 aa17.98■□□□□ 0.47
LITAF-217ENST00000575426 ESR2Q92731 530 aa17.98■□□□□ 0.47
LITAF-217ENST00000575426 ERO1AQ96HE7 468 aa17.98■□□□□ 0.47
LITAF-217ENST00000575426 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.98■□□□□ 0.47
LITAF-217ENST00000575426 ASCC2Q9H1I8 757 aaPredicted RBP17.98■□□□□ 0.47
LITAF-217ENST00000575426 VCPKMTQ9H867 229 aa17.98■□□□□ 0.47
LITAF-217ENST00000575426 ANO2Q9NQ90 1003 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms