RNA–Protein interactions for RNA: ENST00000575333.5

TOM1L1-220, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene TOM1L1, Length 1,849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-220ENST00000575333 MYO1BO43795 1136 aa8.94□□□□□ -0.98
TOM1L1-220ENST00000575333 PHACTR2O75167 634 aa8.94□□□□□ -0.98
TOM1L1-220ENST00000575333 RPSAP08865 295 aaKnown RBP8.94□□□□□ -0.98
TOM1L1-220ENST00000575333 PDHBP11177 359 aa8.94□□□□□ -0.98
TOM1L1-220ENST00000575333 MRPS35P82673 323 aaKnown RBP8.94□□□□□ -0.98
TOM1L1-220ENST00000575333 STIM1Q13586 685 aa8.94□□□□□ -0.98
TOM1L1-220ENST00000575333 SH2D4BQ5SQS7 431 aa8.94□□□□□ -0.98
TOM1L1-220ENST00000575333 SYNE3Q6ZMZ3 975 aa8.94□□□□□ -0.98
TOM1L1-220ENST00000575333 RUBCNQ92622 972 aa8.94□□□□□ -0.98
TOM1L1-220ENST00000575333 BPIFA3Q9BQP9 254 aa8.94□□□□□ -0.98
TOM1L1-220ENST00000575333 DACT1Q9NYF0 836 aa8.94□□□□□ -0.98
TOM1L1-220ENST00000575333 CDC23Q9UJX2 597 aa8.94□□□□□ -0.98
TOM1L1-220ENST00000575333 HPCAL4Q9UM19 191 aa8.94□□□□□ -0.98
TOM1L1-220ENST00000575333 MYOM1P52179 1685 aa8.94□□□□□ -0.98
TOM1L1-220ENST00000575333 CLTCQ00610 1675 aaKnown RBP8.94□□□□□ -0.98
TOM1L1-220ENST00000575333 DNAJC8O75937 253 aaPredicted RBP8.94□□□□□ -0.98
TOM1L1-220ENST00000575333 TMCC1O94876 653 aa8.94□□□□□ -0.98
TOM1L1-220ENST00000575333 LINGO3P0C6S8 592 aa8.94□□□□□ -0.98
TOM1L1-220ENST00000575333 CCDC166P0CW27 439 aa8.94□□□□□ -0.98
TOM1L1-220ENST00000575333 ATP4AP20648 1035 aa8.94□□□□□ -0.98
TOM1L1-220ENST00000575333 FLT3P36888 993 aa8.94□□□□□ -0.98
TOM1L1-220ENST00000575333 GNG11P61952 73 aa8.94□□□□□ -0.98
TOM1L1-220ENST00000575333 LBRQ14739 615 aaKnown RBP8.94□□□□□ -0.98
TOM1L1-220ENST00000575333 PKN1Q16512 942 aa8.94□□□□□ -0.98
TOM1L1-220ENST00000575333 CLPPQ16740 277 aaPredicted RBP8.94□□□□□ -0.98
TOM1L1-220ENST00000575333 SGSM1Q2NKQ1 1148 aa8.94□□□□□ -0.98
TOM1L1-220ENST00000575333 PROX2Q3B8N5 592 aa8.94□□□□□ -0.98
TOM1L1-220ENST00000575333 USH1GQ495M9 461 aa8.94□□□□□ -0.98
TOM1L1-220ENST00000575333 ARMCX5Q6P1M9 558 aa8.94□□□□□ -0.98
TOM1L1-220ENST00000575333 FAM228AQ86W67 206 aa8.94□□□□□ -0.98
TOM1L1-220ENST00000575333 CACTIN-AS1Q8N1I8 211 aa8.94□□□□□ -0.98
TOM1L1-220ENST00000575333 PPP2R3CQ969Q6 453 aa8.94□□□□□ -0.98
TOM1L1-220ENST00000575333 KIFC2Q96AC6 838 aa8.94□□□□□ -0.98
TOM1L1-220ENST00000575333 DHRS1Q96LJ7 313 aa8.94□□□□□ -0.98
TOM1L1-220ENST00000575333 NACA2Q9H009 215 aa8.94□□□□□ -0.98
TOM1L1-220ENST00000575333 NRDE2Q9H7Z3 1164 aa8.94□□□□□ -0.98
TOM1L1-220ENST00000575333 ZNHIT6Q9NWK9 470 aaKnown RBP8.94□□□□□ -0.98
TOM1L1-220ENST00000575333 MYO1AQ9UBC5 1043 aa8.94□□□□□ -0.98
TOM1L1-220ENST00000575333 HDAC6Q9UBN7 1215 aa8.94□□□□□ -0.98
TOM1L1-220ENST00000575333 TMED5Q9Y3A6 229 aa8.94□□□□□ -0.98
TOM1L1-220ENST00000575333 NSD2O96028 1365 aa8.93□□□□□ -0.98
TOM1L1-220ENST00000575333 VWA3AA6NCI4 1184 aa8.93□□□□□ -0.98
TOM1L1-220ENST00000575333 CBFA2T2O43439 604 aa8.93□□□□□ -0.98
TOM1L1-220ENST00000575333 GHRP10912 638 aa8.93□□□□□ -0.98
TOM1L1-220ENST00000575333 EPB41P11171 864 aaKnown RBP8.93□□□□□ -0.98
TOM1L1-220ENST00000575333 STIP1P31948 543 aaKnown RBP8.93□□□□□ -0.98
TOM1L1-220ENST00000575333 KIF5BP33176 963 aa8.93□□□□□ -0.98
TOM1L1-220ENST00000575333 MAGEA10P43363 369 aaPredicted RBP8.93□□□□□ -0.98
TOM1L1-220ENST00000575333 CTCFP49711 727 aaPredicted RBP8.93□□□□□ -0.98
TOM1L1-220ENST00000575333 E2F5Q15329 346 aa8.93□□□□□ -0.98
TOM1L1-220ENST00000575333 NEUROD2Q15784 382 aa8.93□□□□□ -0.98
TOM1L1-220ENST00000575333 LACTB2Q53H82 288 aaPredicted RBP8.93□□□□□ -0.98
TOM1L1-220ENST00000575333 CMPK2Q5EBM0 449 aa8.93□□□□□ -0.98
TOM1L1-220ENST00000575333 WDR78Q5VTH9 848 aa8.93□□□□□ -0.98
TOM1L1-220ENST00000575333 OTUD6AQ7L8S5 288 aa8.93□□□□□ -0.98
TOM1L1-220ENST00000575333 APBB1IPQ7Z5R6 666 aaPredicted RBP8.93□□□□□ -0.98
TOM1L1-220ENST00000575333 CCDC65Q8IXS2 484 aa8.93□□□□□ -0.98
TOM1L1-220ENST00000575333 CKAP2LQ8IYA6 745 aa8.93□□□□□ -0.98
TOM1L1-220ENST00000575333 CCDC155Q8N6L0 562 aa8.93□□□□□ -0.98
TOM1L1-220ENST00000575333 TTC13Q8NBP0 860 aa8.93□□□□□ -0.98
TOM1L1-220ENST00000575333 WDR66Q8TBY9 1149 aa8.93□□□□□ -0.98
TOM1L1-220ENST00000575333 COG1Q8WTW3 980 aa8.93□□□□□ -0.98
TOM1L1-220ENST00000575333 SLC35B4Q969S0 331 aa8.93□□□□□ -0.98
TOM1L1-220ENST00000575333 OPTNQ96CV9 577 aa8.93□□□□□ -0.98
TOM1L1-220ENST00000575333 TRAPPC9Q96Q05 1148 aa8.93□□□□□ -0.98
TOM1L1-220ENST00000575333 NAP1L3Q99457 506 aaPredicted RBP8.93□□□□□ -0.98
TOM1L1-220ENST00000575333 BRD8Q9H0E9 1235 aa8.93□□□□□ -0.98
TOM1L1-220ENST00000575333 EPC1Q9H2F5 836 aa8.93□□□□□ -0.98
TOM1L1-220ENST00000575333 SENP2Q9HC62 589 aa8.93□□□□□ -0.98
TOM1L1-220ENST00000575333 PCDH18Q9HCL0 1135 aa8.93□□□□□ -0.98
TOM1L1-220ENST00000575333 WDR35Q9P2L0 1181 aa8.93□□□□□ -0.98
TOM1L1-220ENST00000575333 DDX25Q9UHL0 483 aaKnown RBP8.93□□□□□ -0.98
TOM1L1-220ENST00000575333 TSKSQ9UJT2 592 aa8.93□□□□□ -0.98
TOM1L1-220ENST00000575333 CTDP1Q9Y5B0 961 aaPredicted RBP8.93□□□□□ -0.98
TOM1L1-220ENST00000575333 MROH1Q8NDA8 1641 aa8.92□□□□□ -0.98
TOM1L1-220ENST00000575333 GPR75-ASB3A0A0A6YYF3 556 aa8.92□□□□□ -0.98
TOM1L1-220ENST00000575333 TARSL2A2RTX5 802 aaKnown RBP8.92□□□□□ -0.98
TOM1L1-220ENST00000575333 LRRIQ3A6PVS8 624 aaPredicted RBP8.92□□□□□ -0.98
TOM1L1-220ENST00000575333 C3orf80F5H4A9 247 aa8.92□□□□□ -0.98
TOM1L1-220ENST00000575333 PRC1O43663 620 aa8.92□□□□□ -0.98
TOM1L1-220ENST00000575333 PARP1P09874 1014 aaKnown RBP8.92□□□□□ -0.98
TOM1L1-220ENST00000575333 PDCP20941 246 aa8.92□□□□□ -0.98
TOM1L1-220ENST00000575333 DNM1Q05193 864 aaKnown RBP8.92□□□□□ -0.98
TOM1L1-220ENST00000575333 MYO1EQ12965 1108 aa8.92□□□□□ -0.98
TOM1L1-220ENST00000575333 KRT72Q14CN4 511 aa8.92□□□□□ -0.98
TOM1L1-220ENST00000575333 RNF187Q5TA31 235 aaPredicted RBP8.92□□□□□ -0.98
TOM1L1-220ENST00000575333 STAG2Q8N3U4 1231 aa8.92□□□□□ -0.98
TOM1L1-220ENST00000575333 MAIP1Q8WWC4 291 aa8.92□□□□□ -0.98
TOM1L1-220ENST00000575333 PNKPQ96T60 521 aa8.92□□□□□ -0.98
TOM1L1-220ENST00000575333 PHOX2BQ99453 314 aa8.92□□□□□ -0.98
TOM1L1-220ENST00000575333 EPN3Q9H201 632 aa8.92□□□□□ -0.98
TOM1L1-220ENST00000575333 GPBP1L1Q9HC44 474 aaPredicted RBP8.92□□□□□ -0.98
TOM1L1-220ENST00000575333 GPCPD1Q9NPB8 672 aa8.92□□□□□ -0.98
TOM1L1-220ENST00000575333 BIN2Q9UBW5 565 aaPredicted RBP8.92□□□□□ -0.98
TOM1L1-220ENST00000575333 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.92□□□□□ -0.98
TOM1L1-220ENST00000575333 DAAM1Q9Y4D1 1078 aa8.92□□□□□ -0.98
TOM1L1-220ENST00000575333 ASB3Q9Y575 518 aa8.92□□□□□ -0.98
TOM1L1-220ENST00000575333 DEPDC5O75140 1603 aa8.92□□□□□ -0.98
TOM1L1-220ENST00000575333 CEP152O94986 1710 aa8.92□□□□□ -0.98
TOM1L1-220ENST00000575333 CTAGE15A4D2H0 777 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms