RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 CTR9Q6PD62 1173 aa10.22□□□□□ -0.77
NCBP3-204ENST00000574911 TRIM65Q6PJ69 517 aa10.22□□□□□ -0.77
NCBP3-204ENST00000574911 FBXO33Q7Z6M2 555 aa10.22□□□□□ -0.77
NCBP3-204ENST00000574911 TNFRSF25Q93038 417 aa10.22□□□□□ -0.77
NCBP3-204ENST00000574911 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.22□□□□□ -0.77
NCBP3-204ENST00000574911 SEMA3EO15041 775 aa10.22□□□□□ -0.77
NCBP3-204ENST00000574911 PRDM1O75626 825 aa10.22□□□□□ -0.77
NCBP3-204ENST00000574911 DDAH1O94760 285 aa10.22□□□□□ -0.77
NCBP3-204ENST00000574911 ERCC5P28715 1186 aaPredicted RBP10.22□□□□□ -0.77
NCBP3-204ENST00000574911 PTPN21Q16825 1174 aa10.22□□□□□ -0.77
NCBP3-204ENST00000574911 ZNF827Q17R98 1081 aa10.22□□□□□ -0.77
NCBP3-204ENST00000574911 KMT5BQ4FZB7 885 aa10.22□□□□□ -0.77
NCBP3-204ENST00000574911 SLC10A5Q5PT55 438 aa10.22□□□□□ -0.77
NCBP3-204ENST00000574911 PDILTQ8N807 584 aa10.22□□□□□ -0.77
NCBP3-204ENST00000574911 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.22□□□□□ -0.77
NCBP3-204ENST00000574911 PRDM4Q9UKN5 801 aa10.22□□□□□ -0.77
NCBP3-204ENST00000574911 V9GY48 417 aaPredicted RBP10.22□□□□□ -0.77
NCBP3-204ENST00000574911 V9GYY5 206 aaPredicted RBP10.22□□□□□ -0.77
NCBP3-204ENST00000574911 ZNF831Q5JPB2 1677 aa10.21□□□□□ -0.77
NCBP3-204ENST00000574911 A0A087X0B3 334 aa10.21□□□□□ -0.77
NCBP3-204ENST00000574911 ARHGAP6O43182 974 aa10.21□□□□□ -0.77
NCBP3-204ENST00000574911 BMP15O95972 392 aa10.21□□□□□ -0.77
NCBP3-204ENST00000574911 DMTNQ08495 405 aa10.21□□□□□ -0.77
NCBP3-204ENST00000574911 ELF2Q15723 593 aa10.21□□□□□ -0.77
NCBP3-204ENST00000574911 NPY5RQ15761 445 aa10.21□□□□□ -0.77
NCBP3-204ENST00000574911 UTP14CQ5TAP6 766 aaKnown RBP10.21□□□□□ -0.77
NCBP3-204ENST00000574911 TMTC3Q6ZXV5 915 aa10.21□□□□□ -0.77
NCBP3-204ENST00000574911 IQCA1Q86XH1 822 aa10.21□□□□□ -0.77
NCBP3-204ENST00000574911 BCL11BQ9C0K0 894 aaPredicted RBP10.21□□□□□ -0.77
NCBP3-204ENST00000574911 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.21□□□□□ -0.773e-8■■■□□ 18.4
NCBP3-204ENST00000574911 CASZ1Q86V15 1759 aa10.21□□□□□ -0.77
NCBP3-204ENST00000574911 PDS5AQ29RF7 1337 aaKnown RBP10.21□□□□□ -0.77
NCBP3-204ENST00000574911 SPATA31A5Q5VU36 1347 aa10.21□□□□□ -0.77
NCBP3-204ENST00000574911 SPATA31A7Q8IWB4 1347 aa10.21□□□□□ -0.77
NCBP3-204ENST00000574911 ORC4O43929 436 aa10.21□□□□□ -0.78
NCBP3-204ENST00000574911 SLFN14P0C7P3 912 aa10.21□□□□□ -0.78
NCBP3-204ENST00000574911 NR1I3Q14994 352 aa10.21□□□□□ -0.78
NCBP3-204ENST00000574911 SPECC1LQ69YQ0 1117 aa10.21□□□□□ -0.78
NCBP3-204ENST00000574911 NUTM2AQ8IVF1 878 aaPredicted RBP10.21□□□□□ -0.78
NCBP3-204ENST00000574911 TRMT44Q8IYL2 757 aaKnown RBP10.21□□□□□ -0.78
NCBP3-204ENST00000574911 LINC00116Q8NCU8 138 aa10.21□□□□□ -0.78
NCBP3-204ENST00000574911 CELF1Q92879 486 aaKnown RBP10.21□□□□□ -0.78
NCBP3-204ENST00000574911 FERMT2Q96AC1 680 aa10.21□□□□□ -0.78
NCBP3-204ENST00000574911 NSUN4Q96CB9 384 aaKnown RBP10.21□□□□□ -0.78
NCBP3-204ENST00000574911 hCG_1642624A0A1W2PR95 340 aa10.2□□□□□ -0.78
NCBP3-204ENST00000574911 WNT7AO00755 349 aa10.2□□□□□ -0.78
NCBP3-204ENST00000574911 RGL2O15211 777 aa10.2□□□□□ -0.78
NCBP3-204ENST00000574911 ZSCAN12O43309 604 aa10.2□□□□□ -0.78
NCBP3-204ENST00000574911 ADAMTS2O95450 1211 aa10.2□□□□□ -0.78
NCBP3-204ENST00000574911 CDK11BP21127 795 aaKnown RBP10.2□□□□□ -0.78
NCBP3-204ENST00000574911 HSP90AA4PQ58FG1 418 aa10.2□□□□□ -0.78
NCBP3-204ENST00000574911 BARGINQ6ZT62 677 aa10.2□□□□□ -0.78
NCBP3-204ENST00000574911 HOMER1Q86YM7 354 aa10.2□□□□□ -0.78
NCBP3-204ENST00000574911 TC2NQ8N9U0 490 aa10.2□□□□□ -0.78
NCBP3-204ENST00000574911 DHX58Q96C10 678 aa10.2□□□□□ -0.78
NCBP3-204ENST00000574911 PAGE5Q96GU1 130 aa10.2□□□□□ -0.78
NCBP3-204ENST00000574911 EPSTI1Q96J88 318 aa10.2□□□□□ -0.78
NCBP3-204ENST00000574911 SAMSN1Q9NSI8 373 aaKnown RBP10.2□□□□□ -0.78
NCBP3-204ENST00000574911 FAM53CQ9NYF3 392 aa10.2□□□□□ -0.78
NCBP3-204ENST00000574911 DNAI1Q9UI46 699 aa10.2□□□□□ -0.78
NCBP3-204ENST00000574911 CNTNAP5Q8WYK1 1306 aa10.2□□□□□ -0.78
NCBP3-204ENST00000574911 MYH6P13533 1939 aa10.2□□□□□ -0.78
NCBP3-204ENST00000574911 USP17L12C9JPN9 530 aa10.2□□□□□ -0.78
NCBP3-204ENST00000574911 USP17L21D6R901 530 aa10.2□□□□□ -0.78
NCBP3-204ENST00000574911 FBXO38Q6PIJ6 1188 aa10.2□□□□□ -0.78
NCBP3-204ENST00000574911 SRBD1Q8N5C6 995 aaKnown RBP10.2□□□□□ -0.78
NCBP3-204ENST00000574911 LRRN4CLQ8ND94 238 aa10.2□□□□□ -0.78
NCBP3-204ENST00000574911 SYMPKQ92797 1274 aaKnown RBP10.2□□□□□ -0.78
NCBP3-204ENST00000574911 CCDC34Q96HJ3 373 aa10.2□□□□□ -0.78
NCBP3-204ENST00000574911 BAG1Q99933 345 aaPredicted RBP10.2□□□□□ -0.78
NCBP3-204ENST00000574911 BRMS1Q9HCU9 246 aa10.2□□□□□ -0.78
NCBP3-204ENST00000574911 PPP2R2CQ9Y2T4 447 aa10.2□□□□□ -0.78
NCBP3-204ENST00000574911 A0A1B0GTH6 734 aa10.2□□□□□ -0.78
NCBP3-204ENST00000574911 VWA3AA6NCI4 1184 aa10.2□□□□□ -0.78
NCBP3-204ENST00000574911 FANCGO15287 622 aa10.2□□□□□ -0.78
NCBP3-204ENST00000574911 KCNQ2O43526 872 aa10.2□□□□□ -0.78
NCBP3-204ENST00000574911 STX10O60499 249 aa10.2□□□□□ -0.78
NCBP3-204ENST00000574911 MECOMQ03112 1051 aa10.2□□□□□ -0.78
NCBP3-204ENST00000574911 DPYDQ12882 1025 aa10.2□□□□□ -0.78
NCBP3-204ENST00000574911 CUL4BQ13620 913 aa10.2□□□□□ -0.78
NCBP3-204ENST00000574911 NOM1Q5C9Z4 860 aaKnown RBP10.2□□□□□ -0.78
NCBP3-204ENST00000574911 APTXQ7Z2E3 356 aaKnown RBP10.2□□□□□ -0.78
NCBP3-204ENST00000574911 GTPBP4Q9BZE4 634 aaKnown RBP10.2□□□□□ -0.78
NCBP3-204ENST00000574911 TAF1P21675 1872 aa10.19□□□□□ -0.78
NCBP3-204ENST00000574911 CD44P16070 742 aaKnown RBP10.19□□□□□ -0.78
NCBP3-204ENST00000574911 KLRK1P26718 216 aa10.19□□□□□ -0.78
NCBP3-204ENST00000574911 ATP2C1P98194 919 aaPredicted RBP10.19□□□□□ -0.78
NCBP3-204ENST00000574911 EVX2Q03828 476 aa10.19□□□□□ -0.78
NCBP3-204ENST00000574911 ZNF174Q15697 407 aa10.19□□□□□ -0.78
NCBP3-204ENST00000574911 TTC38Q5R3I4 469 aa10.19□□□□□ -0.78
NCBP3-204ENST00000574911 SPATA1Q5VX52 437 aa10.19□□□□□ -0.78
NCBP3-204ENST00000574911 DCP1AQ9NPI6 582 aaPredicted RBP10.19□□□□□ -0.78
NCBP3-204ENST00000574911 BAZ2AQ9UIF9 1905 aaKnown RBP10.19□□□□□ -0.78
NCBP3-204ENST00000574911 LAMB1P07942 1786 aa10.19□□□□□ -0.78
NCBP3-204ENST00000574911 MYH2Q9UKX2 1941 aa10.19□□□□□ -0.78
NCBP3-204ENST00000574911 H2AFXP16104 143 aaPredicted RBP10.19□□□□□ -0.78
NCBP3-204ENST00000574911 AFMP43652 599 aa10.19□□□□□ -0.78
NCBP3-204ENST00000574911 ERCC6LQ2NKX8 1250 aa10.19□□□□□ -0.78
NCBP3-204ENST00000574911 SBK1Q52WX2 424 aa10.19□□□□□ -0.78
NCBP3-204ENST00000574911 TBC1D9BQ66K14 1250 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms