RNA–Protein interactions for RNA: ENST00000574545.1

SCARF1-208, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 894 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-208ENST00000574545 POTEEQ6S8J3 1075 aa23.69■■□□□ 1.38
SCARF1-208ENST00000574545 RBBP6Q7Z6E9 1792 aaKnown RBP23.69■■□□□ 1.38
SCARF1-208ENST00000574545 GSG1L2A8MUP6 293 aa23.68■■□□□ 1.38
SCARF1-208ENST00000574545 MX1P20591 662 aa23.68■■□□□ 1.38
SCARF1-208ENST00000574545 RAET1EQ8TD07 263 aa23.68■■□□□ 1.38
SCARF1-208ENST00000574545 A0A1W2PRG0 241 aa23.67■■□□□ 1.38
SCARF1-208ENST00000574545 TNPO2O14787 897 aaKnown RBP23.67■■□□□ 1.38
SCARF1-208ENST00000574545 GRK4P32298 578 aa23.67■■□□□ 1.38
SCARF1-208ENST00000574545 CDK8P49336 464 aa23.67■■□□□ 1.38
SCARF1-208ENST00000574545 FLT3LGP49771 235 aa23.67■■□□□ 1.38
SCARF1-208ENST00000574545 USP14P54578 494 aa23.67■■□□□ 1.38
SCARF1-208ENST00000574545 HERVK_113P62684 666 aa23.67■■□□□ 1.38
SCARF1-208ENST00000574545 IRX3P78415 501 aaPredicted RBP23.67■■□□□ 1.38
SCARF1-208ENST00000574545 C16orf86Q6ZW13 317 aa23.67■■□□□ 1.38
SCARF1-208ENST00000574545 TXNRD2Q9NNW7 524 aa23.67■■□□□ 1.38
SCARF1-208ENST00000574545 RBPJLQ9UBG7 517 aa23.67■■□□□ 1.38
SCARF1-208ENST00000574545 STAP2Q9UGK3 403 aa23.67■■□□□ 1.38
SCARF1-208ENST00000574545 EN2P19622 333 aaPredicted RBP23.66■■□□□ 1.38
SCARF1-208ENST00000574545 IRF5Q13568 498 aa23.66■■□□□ 1.38
SCARF1-208ENST00000574545 SBK1Q52WX2 424 aa23.66■■□□□ 1.38
SCARF1-208ENST00000574545 GIMAP6Q6P9H5 292 aa23.66■■□□□ 1.38
SCARF1-208ENST00000574545 SIAH1Q8IUQ4 282 aa23.66■■□□□ 1.38
SCARF1-208ENST00000574545 TMEM106CQ9BVX2 250 aa23.66■■□□□ 1.38
SCARF1-208ENST00000574545 PEX10O60683 326 aa23.65■■□□□ 1.38
SCARF1-208ENST00000574545 AKR1B1P15121 316 aa23.65■■□□□ 1.38
SCARF1-208ENST00000574545 MTFR1Q15390 333 aa23.65■■□□□ 1.38
SCARF1-208ENST00000574545 ZYXQ15942 572 aaKnown RBP23.65■■□□□ 1.38
SCARF1-208ENST00000574545 CATSPERGQ6ZRH7 1159 aa23.65■■□□□ 1.38
SCARF1-208ENST00000574545 TMEM179Q6ZVK1 233 aa23.65■■□□□ 1.38
SCARF1-208ENST00000574545 SMC5Q8IY18 1101 aa23.65■■□□□ 1.38
SCARF1-208ENST00000574545 EXOC6Q8TAG9 804 aa23.65■■□□□ 1.38
SCARF1-208ENST00000574545 GJD2Q9UKL4 321 aa23.65■■□□□ 1.38
SCARF1-208ENST00000574545 USP17L15C9J2P7 530 aa23.64■■□□□ 1.37
SCARF1-208ENST00000574545 USP17L13C9JLJ4 530 aa23.64■■□□□ 1.37
SCARF1-208ENST00000574545 USP17L11C9JVI0 530 aa23.64■■□□□ 1.37
SCARF1-208ENST00000574545 USP17L18D6R9N7 530 aa23.64■■□□□ 1.37
SCARF1-208ENST00000574545 USP17L22D6RA61 530 aa23.64■■□□□ 1.37
SCARF1-208ENST00000574545 USP17L17D6RBQ6 530 aa23.64■■□□□ 1.37
SCARF1-208ENST00000574545 USP17L19D6RCP7 530 aa23.64■■□□□ 1.37
SCARF1-208ENST00000574545 USP17L20D6RJB6 530 aa23.64■■□□□ 1.37
SCARF1-208ENST00000574545 M0R2C6 588 aa23.64■■□□□ 1.37
SCARF1-208ENST00000574545 GPAA1O43292 621 aa23.64■■□□□ 1.37
SCARF1-208ENST00000574545 VCAM1P19320 739 aa23.64■■□□□ 1.37
SCARF1-208ENST00000574545 USP17L24Q0WX57 530 aa23.64■■□□□ 1.37
SCARF1-208ENST00000574545 Q3C1V9 767 aa23.64■■□□□ 1.37
SCARF1-208ENST00000574545 DDRGK1Q96HY6 314 aa23.64■■□□□ 1.37
SCARF1-208ENST00000574545 CCDC17Q96LX7 622 aa23.64■■□□□ 1.37
SCARF1-208ENST00000574545 FEZ1Q99689 392 aa23.64■■□□□ 1.37
SCARF1-208ENST00000574545 ARPP21Q9UBL0 812 aaPredicted RBP23.64■■□□□ 1.37
SCARF1-208ENST00000574545 MPHOSPH10O00566 681 aaKnown RBP23.63■■□□□ 1.37
SCARF1-208ENST00000574545 AMOTL1Q8IY63 956 aa23.63■■□□□ 1.37
SCARF1-208ENST00000574545 SLAIN1Q8ND83 568 aa23.63■■□□□ 1.37
SCARF1-208ENST00000574545 PXYLP1Q8TE99 480 aa23.63■■□□□ 1.37
SCARF1-208ENST00000574545 COA7Q96BR5 231 aa23.63■■□□□ 1.37
SCARF1-208ENST00000574545 SEC62Q99442 399 aaKnown RBP23.63■■□□□ 1.37
SCARF1-208ENST00000574545 EPB41L4AQ9HCS5 686 aaPredicted RBP23.63■■□□□ 1.37
SCARF1-208ENST00000574545 ADCY3O60266 1144 aa23.62■■□□□ 1.37
SCARF1-208ENST00000574545 PDE1AP54750 535 aa23.62■■□□□ 1.37
SCARF1-208ENST00000574545 LRRFIP1Q32MZ4 808 aaKnown RBP23.62■■□□□ 1.37
SCARF1-208ENST00000574545 ZMYM1Q5SVZ6 1142 aa23.62■■□□□ 1.37
SCARF1-208ENST00000574545 GPRC5AQ8NFJ5 357 aa23.62■■□□□ 1.37
SCARF1-208ENST00000574545 GTF3C2Q8WUA4 911 aaPredicted RBP23.62■■□□□ 1.37
SCARF1-208ENST00000574545 CNMDO75829 334 aa23.61■■□□□ 1.37
SCARF1-208ENST00000574545 MYCP01106 439 aaPredicted RBP23.61■■□□□ 1.37
SCARF1-208ENST00000574545 IGHDP01880 384 aa23.61■■□□□ 1.37
SCARF1-208ENST00000574545 GNAT2P19087 354 aa23.61■■□□□ 1.37
SCARF1-208ENST00000574545 KIAA1755Q5JYT7 1200 aa23.61■■□□□ 1.37
SCARF1-208ENST00000574545 LBX2Q6XYB7 198 aa23.61■■□□□ 1.37
SCARF1-208ENST00000574545 PATL2C9JE40 543 aaKnown RBP23.6■■□□□ 1.37
SCARF1-208ENST00000574545 ERVK-9P63128 1117 aa23.6■■□□□ 1.37
SCARF1-208ENST00000574545 ERVK-24P63145 666 aa23.6■■□□□ 1.37
SCARF1-208ENST00000574545 CLEC10AQ8IUN9 316 aa23.6■■□□□ 1.37
SCARF1-208ENST00000574545 FSD1Q9BTV5 496 aa23.6■■□□□ 1.37
SCARF1-208ENST00000574545 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.6■■□□□ 1.37
SCARF1-208ENST00000574545 RWDD1Q9H446 243 aaPredicted RBP23.6■■□□□ 1.37
SCARF1-208ENST00000574545 ZBTB47Q9UFB7 747 aaPredicted RBP23.6■■□□□ 1.37
SCARF1-208ENST00000574545 TMX2Q9Y320 296 aa23.6■■□□□ 1.37
SCARF1-208ENST00000574545 SUPT16HQ9Y5B9 1047 aaKnown RBP23.6■■□□□ 1.37
SCARF1-208ENST00000574545 MYH8P13535 1937 aa23.6■■□□□ 1.37
SCARF1-208ENST00000574545 ELNP15502 786 aa23.59■■□□□ 1.37
SCARF1-208ENST00000574545 IFNL3Q8IZI9 196 aa23.59■■□□□ 1.37
SCARF1-208ENST00000574545 RPAP3Q9H6T3 665 aaPredicted RBP23.59■■□□□ 1.37
SCARF1-208ENST00000574545 RABGAP1Q9Y3P9 1069 aa23.59■■□□□ 1.37
SCARF1-208ENST00000574545 ROBO3Q96MS0 1386 aa23.59■■□□□ 1.37
SCARF1-208ENST00000574545 LNPKQ9C0E8 428 aa23.58■■□□□ 1.37
SCARF1-208ENST00000574545 PORCNQ9H237 461 aa23.58■■□□□ 1.37
SCARF1-208ENST00000574545 PLXNB2O15031 1838 aa23.58■■□□□ 1.37
SCARF1-208ENST00000574545 SPDYE16A6NNV3 312 aaPredicted RBP23.57■■□□□ 1.36
SCARF1-208ENST00000574545 CCL5P13501 91 aa23.57■■□□□ 1.36
SCARF1-208ENST00000574545 RASA1P20936 1047 aa23.57■■□□□ 1.36
SCARF1-208ENST00000574545 UBXN2AP68543 259 aa23.57■■□□□ 1.36
SCARF1-208ENST00000574545 ICA1Q05084 483 aa23.57■■□□□ 1.36
SCARF1-208ENST00000574545 EVI5LQ96CN4 794 aa23.57■■□□□ 1.36
SCARF1-208ENST00000574545 SHISA4Q96DD7 197 aa23.57■■□□□ 1.36
SCARF1-208ENST00000574545 PAGR1Q9BTK6 254 aa23.57■■□□□ 1.36
SCARF1-208ENST00000574545 MINDY4BA8MYZ0 360 aa23.56■■□□□ 1.36
SCARF1-208ENST00000574545 GJB1P08034 283 aa23.56■■□□□ 1.36
SCARF1-208ENST00000574545 MAPK4P31152 587 aa23.56■■□□□ 1.36
SCARF1-208ENST00000574545 USP6NLQ92738 828 aa23.56■■□□□ 1.36
SCARF1-208ENST00000574545 VCPKMTQ9H867 229 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms