RNA–Protein interactions for RNA: ENST00000574408.5

USP43-205, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 3,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-205ENST00000574408 ZNF830Q96NB3 372 aaPredicted RBP12.05□□□□□ -0.48
USP43-205ENST00000574408 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.05□□□□□ -0.48
USP43-205ENST00000574408 KAT14Q9H8E8 782 aa12.05□□□□□ -0.48
USP43-205ENST00000574408 MYH6P13533 1939 aa12.05□□□□□ -0.48
USP43-205ENST00000574408 CNTNAP5Q8WYK1 1306 aa12.05□□□□□ -0.48
USP43-205ENST00000574408 USP17L3A6NCW0 530 aa12.05□□□□□ -0.48
USP43-205ENST00000574408 USP17L4A6NCW7 530 aa12.05□□□□□ -0.48
USP43-205ENST00000574408 CAVIN2O95810 425 aa12.05□□□□□ -0.48
USP43-205ENST00000574408 TSPY3P0CV98 308 aa12.05□□□□□ -0.48
USP43-205ENST00000574408 TSPY8P0CW00 308 aa12.05□□□□□ -0.48
USP43-205ENST00000574408 RILPL1Q5EBL4 403 aa12.05□□□□□ -0.48
USP43-205ENST00000574408 SHC4Q6S5L8 630 aa12.05□□□□□ -0.48
USP43-205ENST00000574408 USP17L1Q7RTZ2 530 aa12.05□□□□□ -0.48
USP43-205ENST00000574408 CERS3Q8IU89 383 aa12.05□□□□□ -0.48
USP43-205ENST00000574408 SLF2Q8IX21 1173 aa12.05□□□□□ -0.48
USP43-205ENST00000574408 ZNF444Q8N0Y2 327 aaPredicted RBP12.05□□□□□ -0.48
USP43-205ENST00000574408 SRBD1Q8N5C6 995 aaKnown RBP12.05□□□□□ -0.48
USP43-205ENST00000574408 FLAD1Q8NFF5 587 aa12.05□□□□□ -0.48
USP43-205ENST00000574408 ZC3H12CQ9C0D7 883 aaKnown RBP12.05□□□□□ -0.48
USP43-205ENST00000574408 CABP5Q9NP86 173 aa12.05□□□□□ -0.48
USP43-205ENST00000574408 IL17RBQ9NRM6 502 aa12.05□□□□□ -0.48
USP43-205ENST00000574408 ANO10Q9NW15 660 aa12.05□□□□□ -0.48
USP43-205ENST00000574408 F8W031 263 aaPredicted RBP12.04□□□□□ -0.48
USP43-205ENST00000574408 PLCG2P16885 1265 aa12.04□□□□□ -0.48
USP43-205ENST00000574408 SYKP43405 635 aa12.04□□□□□ -0.48
USP43-205ENST00000574408 ANKRD31Q8N7Z5 1873 aa12.04□□□□□ -0.48
USP43-205ENST00000574408 ROBO3Q96MS0 1386 aa12.04□□□□□ -0.48
USP43-205ENST00000574408 FAM205AQ6ZU69 1335 aa12.04□□□□□ -0.48
USP43-205ENST00000574408 PDE6BP35913 854 aa12.04□□□□□ -0.48
USP43-205ENST00000574408 ZRSR1Q15695 479 aaKnown RBP12.04□□□□□ -0.48
USP43-205ENST00000574408 COA1Q9GZY4 146 aa12.04□□□□□ -0.48
USP43-205ENST00000574408 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.04□□□□□ -0.48
USP43-205ENST00000574408 CUTAO60888 179 aa12.04□□□□□ -0.48
USP43-205ENST00000574408 RXRBP28702 533 aa12.04□□□□□ -0.48
USP43-205ENST00000574408 KRT2P35908 639 aa12.04□□□□□ -0.48
USP43-205ENST00000574408 DPP8Q6V1X1 898 aaPredicted RBP12.04□□□□□ -0.48
USP43-205ENST00000574408 KRI1Q8N9T8 703 aaKnown RBP12.04□□□□□ -0.48
USP43-205ENST00000574408 PNMA1Q8ND90 353 aa12.04□□□□□ -0.48
USP43-205ENST00000574408 ZNF622Q969S3 477 aaKnown RBP eCLIP12.04□□□□□ -0.48
USP43-205ENST00000574408 MTMR7Q9Y216 660 aa12.04□□□□□ -0.48
USP43-205ENST00000574408 PCDHB6Q9Y5E3 794 aa12.04□□□□□ -0.48
USP43-205ENST00000574408 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.04□□□□□ -0.48
USP43-205ENST00000574408 FLT1P17948 1338 aa12.03□□□□□ -0.48
USP43-205ENST00000574408 UQCRHLA0A096LP55 91 aa12.03□□□□□ -0.48
USP43-205ENST00000574408 FAM205CA6NFA0 338 aa12.03□□□□□ -0.48
USP43-205ENST00000574408 UQCRHP07919 91 aa12.03□□□□□ -0.48
USP43-205ENST00000574408 ALDH1B1P30837 517 aa12.03□□□□□ -0.48
USP43-205ENST00000574408 KIF5BP33176 963 aa12.03□□□□□ -0.48
USP43-205ENST00000574408 RHBDL3P58872 404 aa12.03□□□□□ -0.48
USP43-205ENST00000574408 DOK7Q18PE1 504 aa12.03□□□□□ -0.48
USP43-205ENST00000574408 DGKHQ86XP1 1220 aa12.03□□□□□ -0.48
USP43-205ENST00000574408 SPC24Q8NBT2 197 aa12.03□□□□□ -0.48
USP43-205ENST00000574408 PHF20Q9BVI0 1012 aa12.03□□□□□ -0.48
USP43-205ENST00000574408 TMX4Q9H1E5 349 aaPredicted RBP12.03□□□□□ -0.48
USP43-205ENST00000574408 KIAA1468Q9P260 1216 aa12.03□□□□□ -0.48
USP43-205ENST00000574408 DLEC1Q9Y238 1755 aa12.03□□□□□ -0.48
USP43-205ENST00000574408 GAKO14976 1311 aa12.03□□□□□ -0.48
USP43-205ENST00000574408 GOLGA6L19H0YKK7 550 aa12.03□□□□□ -0.48
USP43-205ENST00000574408 CEP57L1Q8IYX8 460 aa12.03□□□□□ -0.48
USP43-205ENST00000574408 STX8Q9UNK0 236 aa12.03□□□□□ -0.48
USP43-205ENST00000574408 DAGLAQ9Y4D2 1042 aa12.03□□□□□ -0.48
USP43-205ENST00000574408 NAV1Q8NEY1 1877 aa12.03□□□□□ -0.48
USP43-205ENST00000574408 RASA1P20936 1047 aa12.02□□□□□ -0.48
USP43-205ENST00000574408 IQCB1Q15051 598 aa12.02□□□□□ -0.48
USP43-205ENST00000574408 SPECC1Q5M775 1068 aa12.02□□□□□ -0.48
USP43-205ENST00000574408 RESP18Q5W5W9 173 aa12.02□□□□□ -0.48
USP43-205ENST00000574408 FAM163AQ96GL9 167 aaPredicted RBP12.02□□□□□ -0.48
USP43-205ENST00000574408 MASTLQ96GX5 879 aa12.02□□□□□ -0.48
USP43-205ENST00000574408 TRIM5Q9C035 493 aa12.02□□□□□ -0.48
USP43-205ENST00000574408 BRMS1Q9HCU9 246 aa12.02□□□□□ -0.48
USP43-205ENST00000574408 LRRC37AA6NMS7 1700 aa12.02□□□□□ -0.49
USP43-205ENST00000574408 BECN2A8MW95 431 aa12.02□□□□□ -0.49
USP43-205ENST00000574408 G3V3G9 751 aa12.02□□□□□ -0.49
USP43-205ENST00000574408 BIN1O00499 593 aa12.02□□□□□ -0.49
USP43-205ENST00000574408 CDK8P49336 464 aa12.02□□□□□ -0.49
USP43-205ENST00000574408 DCAF8Q5TAQ9 597 aa12.02□□□□□ -0.49
USP43-205ENST00000574408 ZNF287Q9HBT7 754 aa12.02□□□□□ -0.49
USP43-205ENST00000574408 HPSEQ9Y251 543 aa12.02□□□□□ -0.49
USP43-205ENST00000574408 NT5C2P49902 561 aa12.02□□□□□ -0.49
USP43-205ENST00000574408 CCDC178Q5BJE1 867 aa12.02□□□□□ -0.49
USP43-205ENST00000574408 MXD3Q9BW11 206 aa12.02□□□□□ -0.49
USP43-205ENST00000574408 TTC12Q9H892 705 aaPredicted RBP12.02□□□□□ -0.49
USP43-205ENST00000574408 LTBP1Q14766 1721 aa12.01□□□□□ -0.49
USP43-205ENST00000574408 SCG2P13521 617 aa12.01□□□□□ -0.49
USP43-205ENST00000574408 GRIN1Q05586 938 aa12.01□□□□□ -0.49
USP43-205ENST00000574408 EARS2Q5JPH6 523 aaKnown RBP12.01□□□□□ -0.49
USP43-205ENST00000574408 CERS5Q8N5B7 392 aa12.01□□□□□ -0.49
USP43-205ENST00000574408 VEGFAP15692 232 aaPredicted RBP12.01□□□□□ -0.49
USP43-205ENST00000574408 PICALMQ13492 652 aa12.01□□□□□ -0.49
USP43-205ENST00000574408 STAG2Q8N3U4 1231 aa12.01□□□□□ -0.49
USP43-205ENST00000574408 ANKS1AQ92625 1134 aa12.01□□□□□ -0.49
USP43-205ENST00000574408 TIGD1Q96MW7 591 aa12.01□□□□□ -0.49
USP43-205ENST00000574408 EYA3Q99504 573 aa12.01□□□□□ -0.49
USP43-205ENST00000574408 FBXO2Q9UK22 296 aaPredicted RBP12.01□□□□□ -0.49
USP43-205ENST00000574408 KCNH3Q9ULD8 1083 aa12.01□□□□□ -0.49
USP43-205ENST00000574408 TTF2Q9UNY4 1162 aaKnown RBP12.01□□□□□ -0.49
USP43-205ENST00000574408 CEP131Q9UPN4 1083 aa12.01□□□□□ -0.49
USP43-205ENST00000574408 TRIM75PA6NK02 468 aa12.01□□□□□ -0.49
USP43-205ENST00000574408 PTPREP23469 700 aa12.01□□□□□ -0.49
USP43-205ENST00000574408 DPCR1Q3MIW9 517 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms