RNA–Protein interactions for RNA: ENST00000574217.1

PRPF8-210, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 310 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-210ENST00000574217 RABEP1Q15276 862 aa7.9□□□□□ -1.14
PRPF8-210ENST00000574217 SHROOM1Q2M3G4 852 aaPredicted RBP7.9□□□□□ -1.14
PRPF8-210ENST00000574217 TATDN1Q6P1N9 297 aa7.9□□□□□ -1.14
PRPF8-210ENST00000574217 BLOC1S2Q6QNY1 142 aa7.9□□□□□ -1.14
PRPF8-210ENST00000574217 RUFY3Q7L099 469 aa7.9□□□□□ -1.14
PRPF8-210ENST00000574217 CCDC84Q86UT8 332 aaPredicted RBP7.9□□□□□ -1.14
PRPF8-210ENST00000574217 SCYL3Q8IZE3 742 aa7.9□□□□□ -1.14
PRPF8-210ENST00000574217 OTUD5Q96G74 571 aa7.9□□□□□ -1.14
PRPF8-210ENST00000574217 KIF2CQ99661 725 aa7.9□□□□□ -1.14
PRPF8-210ENST00000574217 UPF3BQ9BZI7 483 aaKnown RBP7.9□□□□□ -1.14
PRPF8-210ENST00000574217 ZSWIM6Q9HCJ5 1215 aa7.9□□□□□ -1.14
PRPF8-210ENST00000574217 CYP46A1Q9Y6A2 500 aa7.9□□□□□ -1.14
PRPF8-210ENST00000574217 TACC3Q9Y6A5 838 aa7.9□□□□□ -1.14
PRPF8-210ENST00000574217 PTPRFP10586 1907 aa7.9□□□□□ -1.15
PRPF8-210ENST00000574217 CEP350Q5VT06 3117 aa7.89□□□□□ -1.15
PRPF8-210ENST00000574217 WDR19Q8NEZ3 1342 aa7.89□□□□□ -1.15
PRPF8-210ENST00000574217 MPHOSPH10O00566 681 aaKnown RBP7.89□□□□□ -1.15
PRPF8-210ENST00000574217 ZBTB48P10074 688 aaPredicted RBP7.89□□□□□ -1.15
PRPF8-210ENST00000574217 PTPRAP18433 802 aa7.89□□□□□ -1.15
PRPF8-210ENST00000574217 RPS6KB1P23443 525 aa7.89□□□□□ -1.15
PRPF8-210ENST00000574217 MAP2K2P36507 400 aa7.89□□□□□ -1.15
PRPF8-210ENST00000574217 NEK4P51957 841 aa7.89□□□□□ -1.15
PRPF8-210ENST00000574217 TFAP4Q01664 338 aa7.89□□□□□ -1.15
PRPF8-210ENST00000574217 SART3Q15020 963 aaKnown RBP7.89□□□□□ -1.15
PRPF8-210ENST00000574217 CERKLQ49MI3 558 aaPredicted RBP7.89□□□□□ -1.15
PRPF8-210ENST00000574217 FAM47AQ5JRC9 791 aa7.89□□□□□ -1.15
PRPF8-210ENST00000574217 DHX32Q7L7V1 743 aaKnown RBP7.89□□□□□ -1.15
PRPF8-210ENST00000574217 IQCA1Q86XH1 822 aa7.89□□□□□ -1.15
PRPF8-210ENST00000574217 ERO1BQ86YB8 467 aa7.89□□□□□ -1.15
PRPF8-210ENST00000574217 MB21D2Q8IYB1 491 aaPredicted RBP7.89□□□□□ -1.15
PRPF8-210ENST00000574217 JMYQ8N9B5 988 aa7.89□□□□□ -1.15
PRPF8-210ENST00000574217 IL27Q8NEV9 243 aa7.89□□□□□ -1.15
PRPF8-210ENST00000574217 CCDC17Q96LX7 622 aa7.89□□□□□ -1.15
PRPF8-210ENST00000574217 UBAC1Q9BSL1 405 aa7.89□□□□□ -1.15
PRPF8-210ENST00000574217 ZSWIM5Q9P217 1185 aa7.89□□□□□ -1.15
PRPF8-210ENST00000574217 PLIN4Q96Q06 1357 aa7.88□□□□□ -1.15
PRPF8-210ENST00000574217 ERICH2A1L162 156 aa7.88□□□□□ -1.15
PRPF8-210ENST00000574217 IRF6O14896 467 aa7.88□□□□□ -1.15
PRPF8-210ENST00000574217 PRC1O43663 620 aa7.88□□□□□ -1.15
PRPF8-210ENST00000574217 ST18O60284 1047 aa7.88□□□□□ -1.15
PRPF8-210ENST00000574217 CAPN15O75808 1086 aa7.88□□□□□ -1.15
PRPF8-210ENST00000574217 CPA1P15085 419 aa7.88□□□□□ -1.15
PRPF8-210ENST00000574217 AKR1B1P15121 316 aa7.88□□□□□ -1.15
PRPF8-210ENST00000574217 FGD1P98174 961 aa7.88□□□□□ -1.15
PRPF8-210ENST00000574217 PPATQ06203 517 aa7.88□□□□□ -1.15
PRPF8-210ENST00000574217 PPIL2Q13356 520 aa7.88□□□□□ -1.15
PRPF8-210ENST00000574217 COL9A3Q14050 684 aaPredicted RBP7.88□□□□□ -1.15
PRPF8-210ENST00000574217 ABCB5Q2M3G0 1257 aa7.88□□□□□ -1.15
PRPF8-210ENST00000574217 TMEM179Q6ZVK1 233 aa7.88□□□□□ -1.15
PRPF8-210ENST00000574217 CYB5R4Q7L1T6 521 aa7.88□□□□□ -1.15
PRPF8-210ENST00000574217 CHST3Q7LGC8 479 aa7.88□□□□□ -1.15
PRPF8-210ENST00000574217 NEDD1Q8NHV4 660 aa7.88□□□□□ -1.15
PRPF8-210ENST00000574217 TMEM87BQ96K49 555 aa7.88□□□□□ -1.15
PRPF8-210ENST00000574217 MTA3Q9BTC8 594 aa7.88□□□□□ -1.15
PRPF8-210ENST00000574217 CABP5Q9NP86 173 aa7.88□□□□□ -1.15
PRPF8-210ENST00000574217 PICK1Q9NRD5 415 aa7.88□□□□□ -1.15
PRPF8-210ENST00000574217 PDRG1Q9NUG6 133 aa7.88□□□□□ -1.15
PRPF8-210ENST00000574217 ZBTB21Q9ULJ3 1066 aa7.88□□□□□ -1.15
PRPF8-210ENST00000574217 ZHX2Q9Y6X8 837 aa7.88□□□□□ -1.15
PRPF8-210ENST00000574217 GREB1LQ9C091 1923 aaPredicted RBP7.88□□□□□ -1.15
PRPF8-210ENST00000574217 TNKSO95271 1327 aa7.87□□□□□ -1.15
PRPF8-210ENST00000574217 MANSC4A6NHS7 340 aaPredicted RBP7.87□□□□□ -1.15
PRPF8-210ENST00000574217 USP17L5A8MUK1 530 aa7.87□□□□□ -1.15
PRPF8-210ENST00000574217 IFIT3O14879 490 aaKnown RBP7.87□□□□□ -1.15
PRPF8-210ENST00000574217 GH2P01242 217 aa7.87□□□□□ -1.15
PRPF8-210ENST00000574217 ASNSP08243 561 aa7.87□□□□□ -1.15
PRPF8-210ENST00000574217 GUCY1A2P33402 732 aa7.87□□□□□ -1.15
PRPF8-210ENST00000574217 TM4SF4P48230 202 aa7.87□□□□□ -1.15
PRPF8-210ENST00000574217 ANTXR2P58335 489 aa7.87□□□□□ -1.15
PRPF8-210ENST00000574217 EXOSC10Q01780 885 aaKnown RBP7.87□□□□□ -1.15
PRPF8-210ENST00000574217 CCDC178Q5BJE1 867 aa7.87□□□□□ -1.15
PRPF8-210ENST00000574217 TMEM67Q5HYA8 995 aa7.87□□□□□ -1.15
PRPF8-210ENST00000574217 PPP4R3BQ5MIZ7 849 aa7.87□□□□□ -1.15
PRPF8-210ENST00000574217 NKX2-3Q8TAU0 364 aa7.87□□□□□ -1.15
PRPF8-210ENST00000574217 MS4A4AQ96JQ5 239 aa7.87□□□□□ -1.15
PRPF8-210ENST00000574217 TCEANC2Q96MN5 208 aa7.87□□□□□ -1.15
PRPF8-210ENST00000574217 ZSCAN10Q96SZ4 725 aaPredicted RBP7.87□□□□□ -1.15
PRPF8-210ENST00000574217 ZKSCAN3Q9BRR0 538 aa7.87□□□□□ -1.15
PRPF8-210ENST00000574217 LRRC2Q9BYS8 371 aa7.87□□□□□ -1.15
PRPF8-210ENST00000574217 TSHZ2Q9NRE2 1034 aa7.87□□□□□ -1.15
PRPF8-210ENST00000574217 GINM1Q9NU53 330 aa7.87□□□□□ -1.15
PRPF8-210ENST00000574217 TCP11L1Q9NUJ3 509 aa7.87□□□□□ -1.15
PRPF8-210ENST00000574217 KCNH4Q9UQ05 1017 aa7.87□□□□□ -1.15
PRPF8-210ENST00000574217 AFG3L2Q9Y4W6 797 aa7.87□□□□□ -1.15
PRPF8-210ENST00000574217 LOC285556D6RIA3 1793 aa7.87□□□□□ -1.15
PRPF8-210ENST00000574217 CCL15-CCL14A0A0B4J2E2 113 aa7.86□□□□□ -1.15
PRPF8-210ENST00000574217 TESPA1A2RU30 521 aaPredicted RBP7.86□□□□□ -1.15
PRPF8-210ENST00000574217 TRIM75PA6NK02 468 aa7.86□□□□□ -1.15
PRPF8-210ENST00000574217 SH2B2O14492 632 aaPredicted RBP7.86□□□□□ -1.15
PRPF8-210ENST00000574217 NMT2O60551 498 aa7.86□□□□□ -1.15
PRPF8-210ENST00000574217 HSPA1AP0DMV8 641 aaKnown RBP7.86□□□□□ -1.15
PRPF8-210ENST00000574217 HSPA1BP0DMV9 641 aaKnown RBP7.86□□□□□ -1.15
PRPF8-210ENST00000574217 LIFRP42702 1097 aa7.86□□□□□ -1.15
PRPF8-210ENST00000574217 GTF2A2P52657 109 aa7.86□□□□□ -1.15
PRPF8-210ENST00000574217 MAP2K1Q02750 393 aaPredicted RBP7.86□□□□□ -1.15
PRPF8-210ENST00000574217 SREBF2Q12772 1141 aa7.86□□□□□ -1.15
PRPF8-210ENST00000574217 SPP2Q13103 211 aa7.86□□□□□ -1.15
PRPF8-210ENST00000574217 SNAPC2Q13487 334 aa7.86□□□□□ -1.15
PRPF8-210ENST00000574217 MOGSQ13724 837 aa7.86□□□□□ -1.15
PRPF8-210ENST00000574217 WTAPQ15007 396 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms