RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-215ENST00000574095 USP14P54578 494 aa31.33■■■□□ 2.61
NPLOC4-215ENST00000574095 KIAA1683Q9H0B3 1180 aa31.33■■■□□ 2.61
NPLOC4-215ENST00000574095 MORF4L1Q9UBU8 362 aa31.33■■■□□ 2.61
NPLOC4-215ENST00000574095 RNF113AO15541 343 aaKnown RBP31.32■■■□□ 2.6
NPLOC4-215ENST00000574095 ADCY3O60266 1144 aa31.32■■■□□ 2.6
NPLOC4-215ENST00000574095 AMOTL1Q8IY63 956 aa31.32■■■□□ 2.6
NPLOC4-215ENST00000574095 SLAIN1Q8ND83 568 aa31.32■■■□□ 2.6
NPLOC4-215ENST00000574095 PI4K2BQ8TCG2 481 aa31.32■■■□□ 2.6
NPLOC4-215ENST00000574095 DDRGK1Q96HY6 314 aa31.32■■■□□ 2.6
NPLOC4-215ENST00000574095 STRBPQ96SI9 672 aaKnown RBP31.32■■■□□ 2.6
NPLOC4-215ENST00000574095 TXNRD2Q9NNW7 524 aa31.32■■■□□ 2.6
NPLOC4-215ENST00000574095 TAOK2Q9UL54 1235 aa31.32■■■□□ 2.6
NPLOC4-215ENST00000574095 ELNP15502 786 aa31.31■■■□□ 2.6
NPLOC4-215ENST00000574095 OSBP2Q969R2 916 aa31.31■■■□□ 2.6
NPLOC4-215ENST00000574095 RBPJLQ9UBG7 517 aa31.31■■■□□ 2.6
NPLOC4-215ENST00000574095 MKI67P46013 3256 aaKnown RBP31.3■■■□□ 2.6
NPLOC4-215ENST00000574095 ERC2O15083 957 aa31.3■■■□□ 2.6
NPLOC4-215ENST00000574095 IRF5Q13568 498 aa31.3■■■□□ 2.6
NPLOC4-215ENST00000574095 ANKRD45Q5TZF3 282 aa31.3■■■□□ 2.6
NPLOC4-215ENST00000574095 CTR9Q6PD62 1173 aa31.3■■■□□ 2.6
NPLOC4-215ENST00000574095 APPBP2Q92624 585 aa31.3■■■□□ 2.6
NPLOC4-215ENST00000574095 A0A1W2PRG0 241 aa31.29■■■□□ 2.6
NPLOC4-215ENST00000574095 USP17L15C9J2P7 530 aa31.29■■■□□ 2.6
NPLOC4-215ENST00000574095 USP17L13C9JLJ4 530 aa31.29■■■□□ 2.6
NPLOC4-215ENST00000574095 USP17L11C9JVI0 530 aa31.29■■■□□ 2.6
NPLOC4-215ENST00000574095 USP17L18D6R9N7 530 aa31.29■■■□□ 2.6
NPLOC4-215ENST00000574095 USP17L22D6RA61 530 aa31.29■■■□□ 2.6
NPLOC4-215ENST00000574095 USP17L17D6RBQ6 530 aa31.29■■■□□ 2.6
NPLOC4-215ENST00000574095 USP17L19D6RCP7 530 aa31.29■■■□□ 2.6
NPLOC4-215ENST00000574095 USP17L20D6RJB6 530 aa31.29■■■□□ 2.6
NPLOC4-215ENST00000574095 AKR1B1P15121 316 aa31.29■■■□□ 2.6
NPLOC4-215ENST00000574095 CDK8P49336 464 aa31.29■■■□□ 2.6
NPLOC4-215ENST00000574095 UBXN2AP68543 259 aa31.29■■■□□ 2.6
NPLOC4-215ENST00000574095 USP17L24Q0WX57 530 aa31.29■■■□□ 2.6
NPLOC4-215ENST00000574095 GPRC5AQ8NFJ5 357 aa31.29■■■□□ 2.6
NPLOC4-215ENST00000574095 GLRX3O76003 335 aaKnown RBP31.28■■■□□ 2.6
NPLOC4-215ENST00000574095 CCL5P13501 91 aa31.28■■■□□ 2.6
NPLOC4-215ENST00000574095 VCAM1P19320 739 aa31.28■■■□□ 2.6
NPLOC4-215ENST00000574095 MX1P20591 662 aa31.28■■■□□ 2.6
NPLOC4-215ENST00000574095 Q3C1V9 767 aa31.28■■■□□ 2.6
NPLOC4-215ENST00000574095 POTEEQ6S8J3 1075 aa31.28■■■□□ 2.6
NPLOC4-215ENST00000574095 CATSPERGQ6ZRH7 1159 aa31.28■■■□□ 2.6
NPLOC4-215ENST00000574095 TMEM179Q6ZVK1 233 aa31.28■■■□□ 2.6
NPLOC4-215ENST00000574095 PXYLP1Q8TE99 480 aa31.28■■■□□ 2.6
NPLOC4-215ENST00000574095 PAGR1Q9BTK6 254 aa31.28■■■□□ 2.6
NPLOC4-215ENST00000574095 ZBTB47Q9UFB7 747 aaPredicted RBP31.28■■■□□ 2.6
NPLOC4-215ENST00000574095 ZFYP08048 801 aaPredicted RBP31.27■■■□□ 2.6
NPLOC4-215ENST00000574095 HDAC1Q13547 482 aaPredicted RBP31.27■■■□□ 2.6
NPLOC4-215ENST00000574095 C16orf86Q6ZW13 317 aa31.27■■■□□ 2.6
NPLOC4-215ENST00000574095 GSG1L2A8MUP6 293 aa31.26■■■□□ 2.59
NPLOC4-215ENST00000574095 GCC1Q96CN9 775 aa31.26■■■□□ 2.59
NPLOC4-215ENST00000574095 RNF208Q9H0X6 261 aa31.26■■■□□ 2.59
NPLOC4-215ENST00000574095 GJD2Q9UKL4 321 aa31.26■■■□□ 2.59
NPLOC4-215ENST00000574095 M0R2C6 588 aa31.25■■■□□ 2.59
NPLOC4-215ENST00000574095 GPAA1O43292 621 aa31.25■■■□□ 2.59
NPLOC4-215ENST00000574095 INHAP05111 366 aa31.25■■■□□ 2.59
NPLOC4-215ENST00000574095 ERVK-9P63128 1117 aa31.25■■■□□ 2.59
NPLOC4-215ENST00000574095 ERVK-24P63145 666 aa31.25■■■□□ 2.59
NPLOC4-215ENST00000574095 CLEC10AQ8IUN9 316 aa31.25■■■□□ 2.59
NPLOC4-215ENST00000574095 GTF3C2Q8WUA4 911 aaPredicted RBP31.25■■■□□ 2.59
NPLOC4-215ENST00000574095 RPAP3Q9H6T3 665 aaPredicted RBP31.25■■■□□ 2.59
NPLOC4-215ENST00000574095 SALL3Q9BXA9 1300 aa31.24■■■□□ 2.59
NPLOC4-215ENST00000574095 CCDC17Q96LX7 622 aa31.24■■■□□ 2.59
NPLOC4-215ENST00000574095 UNC93B1Q9H1C4 597 aa31.24■■■□□ 2.59
NPLOC4-215ENST00000574095 ARPP21Q9UBL0 812 aaPredicted RBP31.24■■■□□ 2.59
NPLOC4-215ENST00000574095 PLXNB2O15031 1838 aa31.24■■■□□ 2.59
NPLOC4-215ENST00000574095 LRRFIP1Q32MZ4 808 aaKnown RBP31.23■■■□□ 2.59
NPLOC4-215ENST00000574095 SIAH1Q8IUQ4 282 aa31.23■■■□□ 2.59
NPLOC4-215ENST00000574095 SEC62Q99442 399 aaKnown RBP31.23■■■□□ 2.59
NPLOC4-215ENST00000574095 FSD1Q9BTV5 496 aa31.23■■■□□ 2.59
NPLOC4-215ENST00000574095 GJB1P08034 283 aa31.22■■■□□ 2.59
NPLOC4-215ENST00000574095 SBK1Q52WX2 424 aa31.22■■■□□ 2.59
NPLOC4-215ENST00000574095 PRPF38BQ5VTL8 546 aaKnown RBP31.22■■■□□ 2.59
NPLOC4-215ENST00000574095 STK11IPQ8N1F8 1099 aa31.22■■■□□ 2.59
NPLOC4-215ENST00000574095 SHISA4Q96DD7 197 aa31.22■■■□□ 2.59
NPLOC4-215ENST00000574095 PORCNQ9H237 461 aa31.22■■■□□ 2.59
NPLOC4-215ENST00000574095 MINDY4BA8MYZ0 360 aa31.21■■■□□ 2.59
NPLOC4-215ENST00000574095 CNMDO75829 334 aa31.21■■■□□ 2.59
NPLOC4-215ENST00000574095 ICA1Q05084 483 aa31.21■■■□□ 2.59
NPLOC4-215ENST00000574095 KIAA1755Q5JYT7 1200 aa31.21■■■□□ 2.59
NPLOC4-215ENST00000574095 GIMAP6Q6P9H5 292 aa31.21■■■□□ 2.59
NPLOC4-215ENST00000574095 CCAR1Q8IX12 1150 aaKnown RBP31.21■■■□□ 2.59
NPLOC4-215ENST00000574095 RABGAP1Q9Y3P9 1069 aa31.21■■■□□ 2.59
NPLOC4-215ENST00000574095 CYP2B6P20813 491 aa31.2■■■□□ 2.59
NPLOC4-215ENST00000574095 MAPK4P31152 587 aa31.2■■■□□ 2.59
NPLOC4-215ENST00000574095 GJA8P48165 433 aa31.2■■■□□ 2.59
NPLOC4-215ENST00000574095 ARHGEF10LQ9HCE6 1279 aa31.2■■■□□ 2.59
NPLOC4-215ENST00000574095 EPB41L4AQ9HCS5 686 aaPredicted RBP31.2■■■□□ 2.59
NPLOC4-215ENST00000574095 APPP05067 770 aa31.19■■■□□ 2.58
NPLOC4-215ENST00000574095 GNAT2P19087 354 aa31.19■■■□□ 2.58
NPLOC4-215ENST00000574095 AAMPQ13685 434 aa31.19■■■□□ 2.58
NPLOC4-215ENST00000574095 EXOC6Q8TAG9 804 aa31.19■■■□□ 2.58
NPLOC4-215ENST00000574095 NKX2-3Q8TAU0 364 aa31.19■■■□□ 2.58
NPLOC4-215ENST00000574095 SPDYE16A6NNV3 312 aaPredicted RBP31.18■■■□□ 2.58
NPLOC4-215ENST00000574095 NUDT12Q9BQG2 462 aa31.18■■■□□ 2.58
NPLOC4-215ENST00000574095 BTBD7Q9P203 1132 aa31.18■■■□□ 2.58
NPLOC4-215ENST00000574095 TMX2Q9Y320 296 aa31.18■■■□□ 2.58
NPLOC4-215ENST00000574095 PATL2C9JE40 543 aaKnown RBP31.17■■■□□ 2.58
NPLOC4-215ENST00000574095 TDO2P48775 406 aa31.17■■■□□ 2.58
NPLOC4-215ENST00000574095 ATP2B2Q01814 1243 aa31.17■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms