RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 PKN2Q16513 984 aaKnown RBP33.2■■■□□ 2.91
SCARF1-207ENST00000573867 EFCC1Q9HA90 598 aa33.2■■■□□ 2.91
SCARF1-207ENST00000573867 HELLSQ9NRZ9 838 aa33.2■■■□□ 2.91
SCARF1-207ENST00000573867 TMOD4Q9NZQ9 345 aa33.2■■■□□ 2.91
SCARF1-207ENST00000573867 MYH8P13535 1937 aa33.2■■■□□ 2.9
SCARF1-207ENST00000573867 A0A1W2PRG0 241 aa33.19■■■□□ 2.9
SCARF1-207ENST00000573867 ECM2O94769 699 aaPredicted RBP33.19■■■□□ 2.9
SCARF1-207ENST00000573867 FBXO46Q6PJ61 603 aaPredicted RBP33.19■■■□□ 2.9
SCARF1-207ENST00000573867 TMEM179Q6ZVK1 233 aa33.19■■■□□ 2.9
SCARF1-207ENST00000573867 ASCC2Q9H1I8 757 aaPredicted RBP33.19■■■□□ 2.9
SCARF1-207ENST00000573867 USP17L2Q6R6M4 530 aa33.18■■■□□ 2.9
SCARF1-207ENST00000573867 ZNF589Q86UQ0 364 aaPredicted RBP33.18■■■□□ 2.9
SCARF1-207ENST00000573867 TICAM2Q86XR7 235 aa33.18■■■□□ 2.9
SCARF1-207ENST00000573867 SIAH1Q8IUQ4 282 aa33.18■■■□□ 2.9
SCARF1-207ENST00000573867 C12orf42Q96LP6 360 aa33.18■■■□□ 2.9
SCARF1-207ENST00000573867 KIAA1683Q9H0B3 1180 aa33.18■■■□□ 2.9
SCARF1-207ENST00000573867 HPS5Q9UPZ3 1129 aa33.18■■■□□ 2.9
SCARF1-207ENST00000573867 GSPT1P15170 499 aaKnown RBP33.17■■■□□ 2.9
SCARF1-207ENST00000573867 SDSP20132 328 aa33.17■■■□□ 2.9
SCARF1-207ENST00000573867 CCDC17Q96LX7 622 aa33.17■■■□□ 2.9
SCARF1-207ENST00000573867 FEZ1Q99689 392 aa33.17■■■□□ 2.9
SCARF1-207ENST00000573867 RASA1P20936 1047 aa33.16■■■□□ 2.9
SCARF1-207ENST00000573867 HOXA7P31268 230 aaPredicted RBP33.16■■■□□ 2.9
SCARF1-207ENST00000573867 MCMDC2Q4G0Z9 681 aa33.16■■■□□ 2.9
SCARF1-207ENST00000573867 SMCR8Q8TEV9 937 aaPredicted RBP33.16■■■□□ 2.9
SCARF1-207ENST00000573867 GNL3Q9BVP2 549 aaKnown RBP eCLIP33.16■■■□□ 2.9
SCARF1-207ENST00000573867 PNMA3Q9UL41 463 aa33.16■■■□□ 2.9
SCARF1-207ENST00000573867 NACAP1Q9BZK3 213 aa33.15■■■□□ 2.9
SCARF1-207ENST00000573867 NAPBQ9H115 298 aa33.15■■■□□ 2.9
SCARF1-207ENST00000573867 PABPC4Q13310 644 aaKnown RBP eCLIP33.14■■■□□ 2.9
SCARF1-207ENST00000573867 TTC22Q5TAA0 569 aa33.14■■■□□ 2.9
SCARF1-207ENST00000573867 TRIM47Q96LD4 638 aa33.14■■■□□ 2.9
SCARF1-207ENST00000573867 PTPN22Q9Y2R2 807 aa33.14■■■□□ 2.9
SCARF1-207ENST00000573867 GREB1LQ9C091 1923 aaPredicted RBP33.13■■■□□ 2.89
SCARF1-207ENST00000573867 CCDC85CA6NKD9 419 aa33.13■■■□□ 2.89
SCARF1-207ENST00000573867 OSBPP22059 807 aa33.13■■■□□ 2.89
SCARF1-207ENST00000573867 P2RX7Q99572 595 aaKnown RBP33.13■■■□□ 2.89
SCARF1-207ENST00000573867 PSMC4P43686 418 aa33.12■■■□□ 2.89
SCARF1-207ENST00000573867 ICA1Q05084 483 aa33.12■■■□□ 2.89
SCARF1-207ENST00000573867 KIAA1755Q5JYT7 1200 aa33.12■■■□□ 2.89
SCARF1-207ENST00000573867 ANKRD13CQ8N6S4 541 aa33.12■■■□□ 2.89
SCARF1-207ENST00000573867 PEX10O60683 326 aa33.11■■■□□ 2.89
SCARF1-207ENST00000573867 PRDM1O75626 825 aa33.11■■■□□ 2.89
SCARF1-207ENST00000573867 VCAM1P19320 739 aa33.11■■■□□ 2.89
SCARF1-207ENST00000573867 USP14P54578 494 aa33.11■■■□□ 2.89
SCARF1-207ENST00000573867 PPARAQ07869 468 aa33.11■■■□□ 2.89
SCARF1-207ENST00000573867 KIF22Q14807 665 aa33.11■■■□□ 2.89
SCARF1-207ENST00000573867 POTEEQ6S8J3 1075 aa33.11■■■□□ 2.89
SCARF1-207ENST00000573867 CCDC171Q6TFL3 1326 aa33.1■■■□□ 2.89
SCARF1-207ENST00000573867 IRX3P78415 501 aaPredicted RBP33.1■■■□□ 2.89
SCARF1-207ENST00000573867 MKNK2Q9HBH9 465 aa33.1■■■□□ 2.89
SCARF1-207ENST00000573867 TACC3Q9Y6A5 838 aa33.1■■■□□ 2.89
SCARF1-207ENST00000573867 CENPFP49454 3210 aa33.09■■■□□ 2.89
SCARF1-207ENST00000573867 PTCH2Q9Y6C5 1203 aa33.09■■■□□ 2.89
SCARF1-207ENST00000573867 HSPD1P10809 573 aaKnown RBP33.08■■■□□ 2.89
SCARF1-207ENST00000573867 GCLCP48506 637 aaPredicted RBP33.08■■■□□ 2.89
SCARF1-207ENST00000573867 HERVK_113P62684 666 aa33.08■■■□□ 2.89
SCARF1-207ENST00000573867 ALX1Q15699 326 aa33.08■■■□□ 2.89
SCARF1-207ENST00000573867 FAM110CQ1W6H9 321 aa33.08■■■□□ 2.89
SCARF1-207ENST00000573867 TMX2Q9Y320 296 aa33.08■■■□□ 2.89
SCARF1-207ENST00000573867 EEF2P13639 858 aaKnown RBP33.07■■■□□ 2.88
SCARF1-207ENST00000573867 CTDSPL2Q05D32 466 aa33.07■■■□□ 2.88
SCARF1-207ENST00000573867 ARHGEF6Q15052 776 aa33.07■■■□□ 2.88
SCARF1-207ENST00000573867 CWC27Q6UX04 472 aaKnown RBP33.07■■■□□ 2.88
SCARF1-207ENST00000573867 TXNRD2Q9NNW7 524 aa33.07■■■□□ 2.88
SCARF1-207ENST00000573867 INCENPQ9NQS7 918 aa33.07■■■□□ 2.88
SCARF1-207ENST00000573867 FGAP02671 866 aa33.06■■■□□ 2.88
SCARF1-207ENST00000573867 CATSPERGQ6ZRH7 1159 aa33.06■■■□□ 2.88
SCARF1-207ENST00000573867 SKAP1Q86WV1 359 aa33.06■■■□□ 2.88
SCARF1-207ENST00000573867 IL25Q9H293 177 aa33.06■■■□□ 2.88
SCARF1-207ENST00000573867 RPAP3Q9H6T3 665 aaPredicted RBP33.06■■■□□ 2.88
SCARF1-207ENST00000573867 KANSL2Q9H9L4 492 aa33.06■■■□□ 2.88
SCARF1-207ENST00000573867 ARHGEF10LQ9HCE6 1279 aa33.06■■■□□ 2.88
SCARF1-207ENST00000573867 DIAPH3Q9NSV4 1193 aa33.06■■■□□ 2.88
SCARF1-207ENST00000573867 IGKV6D-41A0A0C4DH26 115 aa33.05■■■□□ 2.88
SCARF1-207ENST00000573867 USP17L15C9J2P7 530 aa33.05■■■□□ 2.88
SCARF1-207ENST00000573867 USP17L13C9JLJ4 530 aa33.05■■■□□ 2.88
SCARF1-207ENST00000573867 USP17L11C9JVI0 530 aa33.05■■■□□ 2.88
SCARF1-207ENST00000573867 USP17L18D6R9N7 530 aa33.05■■■□□ 2.88
SCARF1-207ENST00000573867 USP17L22D6RA61 530 aa33.05■■■□□ 2.88
SCARF1-207ENST00000573867 USP17L17D6RBQ6 530 aa33.05■■■□□ 2.88
SCARF1-207ENST00000573867 USP17L19D6RCP7 530 aa33.05■■■□□ 2.88
SCARF1-207ENST00000573867 USP17L20D6RJB6 530 aa33.05■■■□□ 2.88
SCARF1-207ENST00000573867 FMNL1O95466 1100 aaPredicted RBP33.05■■■□□ 2.88
SCARF1-207ENST00000573867 USP17L24Q0WX57 530 aa33.05■■■□□ 2.88
SCARF1-207ENST00000573867 MORF4L1Q9UBU8 362 aa33.05■■■□□ 2.88
SCARF1-207ENST00000573867 DDX52Q9Y2R4 599 aaKnown RBP eCLIP33.05■■■□□ 2.88
SCARF1-207ENST00000573867 MGAMO43451 1857 aa33.05■■■□□ 2.88
SCARF1-207ENST00000573867 VCPKMTQ9H867 229 aa33.04■■■□□ 2.88
SCARF1-207ENST00000573867 RBPJLQ9UBG7 517 aa33.04■■■□□ 2.88
SCARF1-207ENST00000573867 SRRDQ9UH36 339 aa33.04■■■□□ 2.88
SCARF1-207ENST00000573867 ANAPC4Q9UJX5 808 aa33.04■■■□□ 2.88
SCARF1-207ENST00000573867 GNRH1P01148 92 aa33.03■■■□□ 2.88
SCARF1-207ENST00000573867 FCGRTP55899 365 aa33.03■■■□□ 2.88
SCARF1-207ENST00000573867 ATP2B2Q01814 1243 aa33.03■■■□□ 2.88
SCARF1-207ENST00000573867 CENPQQ7L2Z9 268 aaPredicted RBP33.02■■■□□ 2.88
SCARF1-207ENST00000573867 ZNF444Q8N0Y2 327 aaPredicted RBP33.02■■■□□ 2.88
SCARF1-207ENST00000573867 SPICE1Q8N0Z3 855 aa33.02■■■□□ 2.88
SCARF1-207ENST00000573867 ZMYM6O95789 1325 aa33.02■■■□□ 2.88
SCARF1-207ENST00000573867 HIP1O00291 1037 aa33.01■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms