RNA–Protein interactions for RNA: ENST00000573209.1

CHRNB1-205, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 2,394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-205ENST00000573209 MTMR6Q9Y217 621 aa11.81□□□□□ -0.52
CHRNB1-205ENST00000573209 SCN11AQ9UI33 1791 aa11.8□□□□□ -0.52
CHRNB1-205ENST00000573209 GOLGA6L7A0A1B0GV03 622 aa11.8□□□□□ -0.52
CHRNB1-205ENST00000573209 RPSAP08865 295 aaKnown RBP11.8□□□□□ -0.52
CHRNB1-205ENST00000573209 ZKSCAN1P17029 563 aaPredicted RBP11.8□□□□□ -0.52
CHRNB1-205ENST00000573209 IBSPP21815 317 aaPredicted RBP11.8□□□□□ -0.52
CHRNB1-205ENST00000573209 TUBB4BP68371 445 aa11.8□□□□□ -0.52
CHRNB1-205ENST00000573209 HOMER1Q86YM7 354 aa11.8□□□□□ -0.52
CHRNB1-205ENST00000573209 SMARCC1Q92922 1105 aaPredicted RBP11.8□□□□□ -0.52
CHRNB1-205ENST00000573209 SLC35B4Q969S0 331 aa11.8□□□□□ -0.52
CHRNB1-205ENST00000573209 LTV1Q96GA3 475 aaPredicted RBP11.8□□□□□ -0.52
CHRNB1-205ENST00000573209 JAKMIP1Q96N16 626 aaKnown RBP11.8□□□□□ -0.52
CHRNB1-205ENST00000573209 CENPHQ9H3R5 247 aa11.8□□□□□ -0.52
CHRNB1-205ENST00000573209 AFDNP55196 1824 aaKnown RBP11.8□□□□□ -0.52
CHRNB1-205ENST00000573209 SLIT3O75094 1523 aa11.8□□□□□ -0.52
CHRNB1-205ENST00000573209 B4DLN1 442 aa11.79□□□□□ -0.52
CHRNB1-205ENST00000573209 FIBPO43427 364 aa11.79□□□□□ -0.52
CHRNB1-205ENST00000573209 PPP1R12BO60237 982 aaPredicted RBP11.79□□□□□ -0.52
CHRNB1-205ENST00000573209 RNF40O75150 1001 aa11.79□□□□□ -0.52
CHRNB1-205ENST00000573209 KCNA6P17658 529 aa11.79□□□□□ -0.52
CHRNB1-205ENST00000573209 ADCY1Q08828 1119 aa11.79□□□□□ -0.52
CHRNB1-205ENST00000573209 TEFQ10587 303 aa11.79□□□□□ -0.52
CHRNB1-205ENST00000573209 ENOX2Q16206 610 aaKnown RBP11.79□□□□□ -0.52
CHRNB1-205ENST00000573209 E4F1Q66K89 784 aaPredicted RBP11.79□□□□□ -0.52
CHRNB1-205ENST00000573209 SEPT14Q6ZU15 432 aa11.79□□□□□ -0.52
CHRNB1-205ENST00000573209 CCDC65Q8IXS2 484 aa11.79□□□□□ -0.52
CHRNB1-205ENST00000573209 NEK9Q8TD19 979 aa11.79□□□□□ -0.52
CHRNB1-205ENST00000573209 ACSBG1Q96GR2 724 aa11.79□□□□□ -0.52
CHRNB1-205ENST00000573209 MPHOSPH6Q99547 160 aaKnown RBP11.79□□□□□ -0.52
CHRNB1-205ENST00000573209 RETREG1Q9H6L5 497 aa11.79□□□□□ -0.52
CHRNB1-205ENST00000573209 SLC40A1Q9NP59 571 aa11.79□□□□□ -0.52
CHRNB1-205ENST00000573209 SWAP70Q9UH65 585 aa11.79□□□□□ -0.52
CHRNB1-205ENST00000573209 HOOK1Q9UJC3 728 aaKnown RBP11.79□□□□□ -0.52
CHRNB1-205ENST00000573209 TPCN1Q9ULQ1 816 aa11.79□□□□□ -0.52
CHRNB1-205ENST00000573209 C5P01031 1676 aa11.79□□□□□ -0.52
CHRNB1-205ENST00000573209 HEG1Q9ULI3 1381 aa11.79□□□□□ -0.52
CHRNB1-205ENST00000573209 LARGE1O95461 756 aa11.79□□□□□ -0.52
CHRNB1-205ENST00000573209 IFIT2P09913 472 aaKnown RBP11.79□□□□□ -0.52
CHRNB1-205ENST00000573209 PPP2R3AQ06190 1150 aa11.79□□□□□ -0.52
CHRNB1-205ENST00000573209 NECTIN1Q15223 517 aa11.79□□□□□ -0.52
CHRNB1-205ENST00000573209 OLFML1Q6UWY5 402 aa11.79□□□□□ -0.52
CHRNB1-205ENST00000573209 CCDC83Q8IWF9 413 aa11.79□□□□□ -0.52
CHRNB1-205ENST00000573209 RAB21Q9UL25 225 aa11.79□□□□□ -0.52
CHRNB1-205ENST00000573209 L1RE1Q9UN81 338 aa11.79□□□□□ -0.52
CHRNB1-205ENST00000573209 ITM2BQ9Y287 266 aa11.79□□□□□ -0.52
CHRNB1-205ENST00000573209 GMEB1Q9Y692 573 aa11.79□□□□□ -0.52
CHRNB1-205ENST00000573209 PARP3Q9Y6F1 533 aa11.79□□□□□ -0.52
CHRNB1-205ENST00000573209 BTBD11A6QL63 1104 aa11.78□□□□□ -0.52
CHRNB1-205ENST00000573209 CYP27B1O15528 508 aa11.78□□□□□ -0.52
CHRNB1-205ENST00000573209 TPPPO94811 219 aa11.78□□□□□ -0.52
CHRNB1-205ENST00000573209 PDCP20941 246 aa11.78□□□□□ -0.52
CHRNB1-205ENST00000573209 PSMA5P28066 241 aa11.78□□□□□ -0.52
CHRNB1-205ENST00000573209 AARSP49588 968 aaKnown RBP eCLIP11.78□□□□□ -0.52
CHRNB1-205ENST00000573209 CUL4BQ13620 913 aa11.78□□□□□ -0.52
CHRNB1-205ENST00000573209 USHBP1Q8N6Y0 703 aa11.78□□□□□ -0.52
CHRNB1-205ENST00000573209 KCNH5Q8NCM2 988 aa11.78□□□□□ -0.52
CHRNB1-205ENST00000573209 ERMNQ8TAM6 284 aa11.78□□□□□ -0.52
CHRNB1-205ENST00000573209 BCAS4Q8TDM0 211 aa11.78□□□□□ -0.52
CHRNB1-205ENST00000573209 PAGR1Q9BTK6 254 aa11.78□□□□□ -0.52
CHRNB1-205ENST00000573209 IRF2BPLQ9H1B7 796 aa11.78□□□□□ -0.52
CHRNB1-205ENST00000573209 ALDH8A1Q9H2A2 487 aaPredicted RBP11.78□□□□□ -0.52
CHRNB1-205ENST00000573209 VIPAS39Q9H9C1 493 aa11.78□□□□□ -0.52
CHRNB1-205ENST00000573209 PHF24Q9UPV7 400 aa11.78□□□□□ -0.52
CHRNB1-205ENST00000573209 UTYO14607 1347 aa11.78□□□□□ -0.52
CHRNB1-205ENST00000573209 JCADQ9P266 1359 aa11.78□□□□□ -0.52
CHRNB1-205ENST00000573209 TMEM221A6NGB7 291 aa11.78□□□□□ -0.52
CHRNB1-205ENST00000573209 A6NNZ2 444 aa11.78□□□□□ -0.52
CHRNB1-205ENST00000573209 TUBBP07437 444 aa11.78□□□□□ -0.52
CHRNB1-205ENST00000573209 ATP5JP18859 108 aa11.78□□□□□ -0.52
CHRNB1-205ENST00000573209 PDE6BP35913 854 aa11.78□□□□□ -0.52
CHRNB1-205ENST00000573209 PTH1RQ03431 593 aa11.78□□□□□ -0.52
CHRNB1-205ENST00000573209 ANKRD1Q15327 319 aa11.78□□□□□ -0.52
CHRNB1-205ENST00000573209 TUBB8Q3ZCM7 444 aa11.78□□□□□ -0.52
CHRNB1-205ENST00000573209 SOGA3Q5TF21 947 aa11.78□□□□□ -0.52
CHRNB1-205ENST00000573209 KSR2Q6VAB6 950 aa11.78□□□□□ -0.52
CHRNB1-205ENST00000573209 SAPCD2Q86UD0 394 aa11.78□□□□□ -0.52
CHRNB1-205ENST00000573209 SYCP3Q8IZU3 236 aa11.78□□□□□ -0.52
CHRNB1-205ENST00000573209 MPHOSPH8Q99549 860 aa11.78□□□□□ -0.52
CHRNB1-205ENST00000573209 BRD8Q9H0E9 1235 aa11.78□□□□□ -0.52
CHRNB1-205ENST00000573209 ZWILCHQ9H900 591 aa11.78□□□□□ -0.52
CHRNB1-205ENST00000573209 C9orf78Q9NZ63 289 aaPredicted RBP11.78□□□□□ -0.52
CHRNB1-205ENST00000573209 HOXA10P31260 410 aaPredicted RBP11.77□□□□□ -0.52
CHRNB1-205ENST00000573209 CASP8Q14790 479 aa11.77□□□□□ -0.52
CHRNB1-205ENST00000573209 LAMA4Q16363 1823 aa11.77□□□□□ -0.52
CHRNB1-205ENST00000573209 PRPF40BQ6NWY9 871 aaKnown RBP11.77□□□□□ -0.52
CHRNB1-205ENST00000573209 TRIM11Q96F44 468 aa11.77□□□□□ -0.52
CHRNB1-205ENST00000573209 CORO1BQ9BR76 489 aa11.77□□□□□ -0.52
CHRNB1-205ENST00000573209 EPC1Q9H2F5 836 aa11.77□□□□□ -0.52
CHRNB1-205ENST00000573209 ACTR5Q9H9F9 607 aaPredicted RBP11.77□□□□□ -0.52
CHRNB1-205ENST00000573209 LGR6Q9HBX8 967 aa11.77□□□□□ -0.52
CHRNB1-205ENST00000573209 IMPACTQ9P2X3 320 aa11.77□□□□□ -0.52
CHRNB1-205ENST00000573209 PXDNQ92626 1479 aa11.77□□□□□ -0.53
CHRNB1-205ENST00000573209 CDHR2Q9BYE9 1310 aa11.77□□□□□ -0.53
CHRNB1-205ENST00000573209 LUC7L3O95232 432 aaKnown RBP11.77□□□□□ -0.53
CHRNB1-205ENST00000573209 MBD4O95243 580 aa11.77□□□□□ -0.53
CHRNB1-205ENST00000573209 ZFXP17010 805 aaPredicted RBP11.77□□□□□ -0.53
CHRNB1-205ENST00000573209 IRAK1P51617 712 aa11.77□□□□□ -0.53
CHRNB1-205ENST00000573209 INHBCP55103 352 aa11.77□□□□□ -0.53
CHRNB1-205ENST00000573209 KRT85P78386 507 aa11.77□□□□□ -0.53
CHRNB1-205ENST00000573209 DNM1Q05193 864 aaKnown RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms