RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 ERMNQ8TAM6 284 aa11.55□□□□□ -0.56
SMG6-213ENST00000573166 SLC10A4Q96EP9 437 aa11.55□□□□□ -0.56
SMG6-213ENST00000573166 MAGEC2Q9UBF1 373 aaPredicted RBP11.55□□□□□ -0.56
SMG6-213ENST00000573166 DACH1Q9UI36 760 aa11.55□□□□□ -0.56
SMG6-213ENST00000573166 PFKFB2O60825 505 aa11.54□□□□□ -0.56
SMG6-213ENST00000573166 ALAS1P13196 640 aa11.54□□□□□ -0.56
SMG6-213ENST00000573166 ADCY7P51828 1080 aa11.54□□□□□ -0.56
SMG6-213ENST00000573166 ABT1Q9ULW3 272 aaKnown RBP11.54□□□□□ -0.56
SMG6-213ENST00000573166 SPTLC2O15270 562 aa11.54□□□□□ -0.56
SMG6-213ENST00000573166 SP4Q02446 784 aa11.54□□□□□ -0.56
SMG6-213ENST00000573166 TMEM179Q6ZVK1 233 aa11.54□□□□□ -0.56
SMG6-213ENST00000573166 TBC1D10CQ8IV04 446 aa11.54□□□□□ -0.56
SMG6-213ENST00000573166 IGSF3O75054 1194 aa11.54□□□□□ -0.56
SMG6-213ENST00000573166 CXCL9Q07325 125 aa11.54□□□□□ -0.56
SMG6-213ENST00000573166 MKRN3Q13064 507 aaKnown RBP11.54□□□□□ -0.56
SMG6-213ENST00000573166 ALX1Q15699 326 aa11.54□□□□□ -0.56
SMG6-213ENST00000573166 AGBL3Q8NEM8 1001 aa11.54□□□□□ -0.56
SMG6-213ENST00000573166 ZMYM6O95789 1325 aa11.53□□□□□ -0.56
SMG6-213ENST00000573166 IBSPP21815 317 aaPredicted RBP11.53□□□□□ -0.56
SMG6-213ENST00000573166 RPS12P25398 132 aaKnown RBP11.53□□□□□ -0.56
SMG6-213ENST00000573166 MRE11P49959 708 aa11.53□□□□□ -0.56
SMG6-213ENST00000573166 CDC42EP5Q6NZY7 148 aa11.53□□□□□ -0.56
SMG6-213ENST00000573166 KCTD1Q719H9 257 aa11.53□□□□□ -0.56
SMG6-213ENST00000573166 STAG1Q8WVM7 1258 aa11.53□□□□□ -0.56
SMG6-213ENST00000573166 HACL1Q9UJ83 578 aa11.53□□□□□ -0.56
SMG6-213ENST00000573166 SCAF8Q9UPN6 1271 aaKnown RBP11.53□□□□□ -0.56
SMG6-213ENST00000573166 FAM208AQ9UK61 1670 aaKnown RBP11.53□□□□□ -0.56
SMG6-213ENST00000573166 RGPD5Q99666 1765 aa11.53□□□□□ -0.56
SMG6-213ENST00000573166 TRPM3Q9HCF6 1732 aaPredicted RBP11.53□□□□□ -0.56
SMG6-213ENST00000573166 COL16A1Q07092 1604 aaPredicted RBP11.53□□□□□ -0.56
SMG6-213ENST00000573166 USP14P54578 494 aa11.53□□□□□ -0.56
SMG6-213ENST00000573166 ZNF174Q15697 407 aa11.53□□□□□ -0.56
SMG6-213ENST00000573166 FAM173BQ6P4H8 233 aa11.53□□□□□ -0.56
SMG6-213ENST00000573166 TRIM5Q9C035 493 aa11.53□□□□□ -0.56
SMG6-213ENST00000573166 GPHNQ9NQX3 736 aaPredicted RBP11.53□□□□□ -0.56
SMG6-213ENST00000573166 PKD2L1Q9P0L9 805 aa11.53□□□□□ -0.56
SMG6-213ENST00000573166 BIN2Q9UBW5 565 aaPredicted RBP11.53□□□□□ -0.56
SMG6-213ENST00000573166 RILPL1Q5EBL4 403 aa11.53□□□□□ -0.56
SMG6-213ENST00000573166 ANGEL2Q5VTE6 544 aaKnown RBP11.53□□□□□ -0.56
SMG6-213ENST00000573166 PPP4R3AQ6IN85 833 aa11.53□□□□□ -0.56
SMG6-213ENST00000573166 REXO1Q8N1G1 1221 aaKnown RBP11.53□□□□□ -0.56
SMG6-213ENST00000573166 C2orf69Q8N8R5 385 aa11.53□□□□□ -0.56
SMG6-213ENST00000573166 ZNF341Q9BYN7 854 aa11.53□□□□□ -0.56
SMG6-213ENST00000573166 GGA3Q9NZ52 723 aa11.53□□□□□ -0.56
SMG6-213ENST00000573166 PODXL2Q9NZ53 605 aa11.53□□□□□ -0.56
SMG6-213ENST00000573166 SERPINA10Q9UK55 444 aa11.53□□□□□ -0.56
SMG6-213ENST00000573166 SMCO2A6NFE2 343 aa11.52□□□□□ -0.56
SMG6-213ENST00000573166 WTIPA6NIX2 430 aaPredicted RBP11.52□□□□□ -0.56
SMG6-213ENST00000573166 MYCLP12524 364 aaPredicted RBP11.52□□□□□ -0.56
SMG6-213ENST00000573166 UBE2HP62256 183 aa11.52□□□□□ -0.56
SMG6-213ENST00000573166 SEPT2Q15019 361 aa11.52□□□□□ -0.56
SMG6-213ENST00000573166 USP17L2Q6R6M4 530 aa11.52□□□□□ -0.56
SMG6-213ENST00000573166 FBXO11Q86XK2 927 aa11.52□□□□□ -0.56
SMG6-213ENST00000573166 MYOZ2Q9NPC6 264 aa11.52□□□□□ -0.56
SMG6-213ENST00000573166 BMP3P12645 472 aa11.52□□□□□ -0.56
SMG6-213ENST00000573166 SLC16A2P36021 539 aa11.52□□□□□ -0.56
SMG6-213ENST00000573166 KLHL10Q6JEL2 608 aa11.52□□□□□ -0.56
SMG6-213ENST00000573166 DGKHQ86XP1 1220 aa11.52□□□□□ -0.56
SMG6-213ENST00000573166 PDGFDQ9GZP0 370 aaPredicted RBP11.52□□□□□ -0.56
SMG6-213ENST00000573166 ZNF70Q9UC06 446 aaPredicted RBP11.52□□□□□ -0.56
SMG6-213ENST00000573166 SH2B2O14492 632 aaPredicted RBP11.52□□□□□ -0.57
SMG6-213ENST00000573166 MATR3P43243 847 aaKnown RBP eCLIP11.52□□□□□ -0.57
SMG6-213ENST00000573166 SYKP43405 635 aa11.52□□□□□ -0.57
SMG6-213ENST00000573166 NONOQ15233 471 aaKnown RBP eCLIP11.52□□□□□ -0.57
SMG6-213ENST00000573166 FILIP1LQ4L180 1135 aa11.52□□□□□ -0.57
SMG6-213ENST00000573166 ASPRV1Q53RT3 343 aa11.52□□□□□ -0.57
SMG6-213ENST00000573166 OSBPL5Q9H0X9 879 aaPredicted RBP11.52□□□□□ -0.57
SMG6-213ENST00000573166 PCDHA1Q9Y5I3 950 aa11.52□□□□□ -0.57
SMG6-213ENST00000573166 ZHX2Q9Y6X8 837 aa11.52□□□□□ -0.57
SMG6-213ENST00000573166 SYCE3A1L190 88 aa11.52□□□□□ -0.57
SMG6-213ENST00000573166 LIFRP42702 1097 aa11.52□□□□□ -0.57
SMG6-213ENST00000573166 AMPD3Q01432 767 aa11.52□□□□□ -0.57
SMG6-213ENST00000573166 DTHD1Q6ZMT9 781 aa11.52□□□□□ -0.57
SMG6-213ENST00000573166 GPKOWQ92917 476 aaPredicted RBP eCLIP11.52□□□□□ -0.57
SMG6-213ENST00000573166 DDX19AQ9NUU7 478 aaKnown RBP11.52□□□□□ -0.57
SMG6-213ENST00000573166 DLG5Q8TDM6 1919 aa11.51□□□□□ -0.57
SMG6-213ENST00000573166 IPO7O95373 1038 aaKnown RBP11.51□□□□□ -0.57
SMG6-213ENST00000573166 SCG2P13521 617 aa11.51□□□□□ -0.57
SMG6-213ENST00000573166 SCRN1Q12765 414 aa11.51□□□□□ -0.57
SMG6-213ENST00000573166 CRY2Q49AN0 593 aa11.51□□□□□ -0.57
SMG6-213ENST00000573166 C12orf60Q5U649 245 aa11.51□□□□□ -0.57
SMG6-213ENST00000573166 KRT79Q5XKE5 535 aa11.51□□□□□ -0.57
SMG6-213ENST00000573166 FLT1P17948 1338 aa11.51□□□□□ -0.57
SMG6-213ENST00000573166 RGPD2P0DJD1 1756 aa11.51□□□□□ -0.57
SMG6-213ENST00000573166 PRAMEF18Q5VWM3 479 aa11.51□□□□□ -0.57
SMG6-213ENST00000573166 KRT25Q7Z3Z0 450 aa11.51□□□□□ -0.57
SMG6-213ENST00000573166 VTI1AQ96AJ9 217 aa11.51□□□□□ -0.57
SMG6-213ENST00000573166 TTC14Q96N46 770 aa11.51□□□□□ -0.57
SMG6-213ENST00000573166 HERC5Q9UII4 1024 aaKnown RBP11.51□□□□□ -0.57
SMG6-213ENST00000573166 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.51□□□□□ -0.57
SMG6-213ENST00000573166 NEDD4P46934 1319 aa11.51□□□□□ -0.57
SMG6-213ENST00000573166 GPR75-ASB3A0A0A6YYF3 556 aa11.51□□□□□ -0.57
SMG6-213ENST00000573166 NASPP49321 788 aaPredicted RBP11.51□□□□□ -0.57
SMG6-213ENST00000573166 PYM1Q9BRP8 204 aaKnown RBP11.51□□□□□ -0.57
SMG6-213ENST00000573166 PSTPIP2Q9H939 334 aa11.51□□□□□ -0.57
SMG6-213ENST00000573166 NHSL1Q5SYE7 1610 aa11.51□□□□□ -0.57
SMG6-213ENST00000573166 CCDC183Q5T5S1 534 aa11.5□□□□□ -0.57
SMG6-213ENST00000573166 AMIGO3Q86WK7 504 aa11.5□□□□□ -0.57
SMG6-213ENST00000573166 MRPS27Q92552 414 aaKnown RBP11.5□□□□□ -0.57
SMG6-213ENST00000573166 CCPG1Q9ULG6 757 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms