RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 CCDC84Q86UT8 332 aaPredicted RBP9.31□□□□□ -0.92
SMG6-211ENST00000572369 CCDC136Q96JN2 1154 aa9.31□□□□□ -0.92
SMG6-211ENST00000572369 MS4A4AQ96JQ5 239 aa9.31□□□□□ -0.92
SMG6-211ENST00000572369 STRBPQ96SI9 672 aaKnown RBP9.31□□□□□ -0.92
SMG6-211ENST00000572369 SEC62Q99442 399 aaKnown RBP9.31□□□□□ -0.92
SMG6-211ENST00000572369 C1QTNF1Q9BXJ1 281 aa9.31□□□□□ -0.92
SMG6-211ENST00000572369 NACAP1Q9BZK3 213 aa9.31□□□□□ -0.92
SMG6-211ENST00000572369 EHD4Q9H223 541 aa9.31□□□□□ -0.92
SMG6-211ENST00000572369 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.31□□□□□ -0.92
SMG6-211ENST00000572369 MINDY4BA8MYZ0 360 aa9.3□□□□□ -0.92
SMG6-211ENST00000572369 USP17L12C9JPN9 530 aa9.3□□□□□ -0.92
SMG6-211ENST00000572369 USP17L21D6R901 530 aa9.3□□□□□ -0.92
SMG6-211ENST00000572369 CXCL11O14625 94 aa9.3□□□□□ -0.92
SMG6-211ENST00000572369 CYP2D6P10635 497 aa9.3□□□□□ -0.92
SMG6-211ENST00000572369 SPP2Q13103 211 aa9.3□□□□□ -0.92
SMG6-211ENST00000572369 ABCB5Q2M3G0 1257 aa9.3□□□□□ -0.92
SMG6-211ENST00000572369 ZMYM1Q5SVZ6 1142 aa9.3□□□□□ -0.92
SMG6-211ENST00000572369 FASTKD5Q7L8L6 764 aaKnown RBP9.3□□□□□ -0.92
SMG6-211ENST00000572369 STK11IPQ8N1F8 1099 aa9.3□□□□□ -0.92
SMG6-211ENST00000572369 BRI3BPQ8WY22 251 aa9.3□□□□□ -0.92
SMG6-211ENST00000572369 PTPN18Q99952 460 aa9.3□□□□□ -0.92
SMG6-211ENST00000572369 TBC1D2Q9BYX2 928 aa9.3□□□□□ -0.92
SMG6-211ENST00000572369 OSBPL3Q9H4L5 887 aa9.3□□□□□ -0.92
SMG6-211ENST00000572369 ZFYVE28Q9HCC9 887 aa9.3□□□□□ -0.92
SMG6-211ENST00000572369 DIAPH3Q9NSV4 1193 aa9.3□□□□□ -0.92
SMG6-211ENST00000572369 ARPP21Q9UBL0 812 aaPredicted RBP9.3□□□□□ -0.92
SMG6-211ENST00000572369 PTPRFP10586 1907 aa9.3□□□□□ -0.92
SMG6-211ENST00000572369 CDH23Q9H251 3354 aa9.3□□□□□ -0.92
SMG6-211ENST00000572369 CYP2D7A0A087X1C5 515 aa9.29□□□□□ -0.92
SMG6-211ENST00000572369 TESPA1A2RU30 521 aaPredicted RBP9.29□□□□□ -0.92
SMG6-211ENST00000572369 GSG1L2A8MUP6 293 aa9.29□□□□□ -0.92
SMG6-211ENST00000572369 PATL2C9JE40 543 aaKnown RBP9.29□□□□□ -0.92
SMG6-211ENST00000572369 BTBD19C9JJ37 291 aa9.29□□□□□ -0.92
SMG6-211ENST00000572369 FARP2O94887 1054 aaPredicted RBP9.29□□□□□ -0.92
SMG6-211ENST00000572369 GH2P01242 217 aa9.29□□□□□ -0.92
SMG6-211ENST00000572369 GJA8P48165 433 aa9.29□□□□□ -0.92
SMG6-211ENST00000572369 MFAP1P55081 439 aaKnown RBP9.29□□□□□ -0.92
SMG6-211ENST00000572369 RRP1BQ14684 758 aaKnown RBP9.29□□□□□ -0.92
SMG6-211ENST00000572369 RAB3GAP1Q15042 981 aa9.29□□□□□ -0.92
SMG6-211ENST00000572369 ARHGEF6Q15052 776 aa9.29□□□□□ -0.92
SMG6-211ENST00000572369 MTFR1Q15390 333 aa9.29□□□□□ -0.92
SMG6-211ENST00000572369 CTR9Q6PD62 1173 aa9.29□□□□□ -0.92
SMG6-211ENST00000572369 CCDC129Q6ZRS4 1044 aa9.29□□□□□ -0.92
SMG6-211ENST00000572369 CENPQQ7L2Z9 268 aaPredicted RBP9.29□□□□□ -0.92
SMG6-211ENST00000572369 METTL16Q86W50 562 aaKnown RBP9.29□□□□□ -0.92
SMG6-211ENST00000572369 FAM43AQ8N2R8 423 aa9.29□□□□□ -0.92
SMG6-211ENST00000572369 ZNF280CQ8ND82 737 aa9.29□□□□□ -0.92
SMG6-211ENST00000572369 DYNLL2Q96FJ2 89 aa9.29□□□□□ -0.92
SMG6-211ENST00000572369 CDX2Q99626 313 aaPredicted RBP9.29□□□□□ -0.92
SMG6-211ENST00000572369 FEZ1Q99689 392 aa9.29□□□□□ -0.92
SMG6-211ENST00000572369 NAPBQ9H115 298 aa9.29□□□□□ -0.92
SMG6-211ENST00000572369 DNAJC18Q9H819 358 aa9.29□□□□□ -0.92
SMG6-211ENST00000572369 HELLSQ9NRZ9 838 aa9.29□□□□□ -0.92
SMG6-211ENST00000572369 GINM1Q9NU53 330 aa9.29□□□□□ -0.92
SMG6-211ENST00000572369 TMOD4Q9NZQ9 345 aa9.29□□□□□ -0.92
SMG6-211ENST00000572369 SWAP70Q9UH65 585 aa9.29□□□□□ -0.92
SMG6-211ENST00000572369 ZBTB21Q9ULJ3 1066 aa9.29□□□□□ -0.92
SMG6-211ENST00000572369 KCNH4Q9UQ05 1017 aa9.29□□□□□ -0.92
SMG6-211ENST00000572369 AFG3L2Q9Y4W6 797 aa9.29□□□□□ -0.92
SMG6-211ENST00000572369 A0A0G2JLL6 359 aaPredicted RBP9.28□□□□□ -0.92
SMG6-211ENST00000572369 USP17L10C9JJH3 530 aa9.28□□□□□ -0.92
SMG6-211ENST00000572369 HIP1O00291 1037 aa9.28□□□□□ -0.92
SMG6-211ENST00000572369 PDHXO00330 501 aa9.28□□□□□ -0.92
SMG6-211ENST00000572369 SLC3A2P08195 630 aaKnown RBP9.28□□□□□ -0.92
SMG6-211ENST00000572369 SDSP20132 328 aa9.28□□□□□ -0.92
SMG6-211ENST00000572369 PDE4AP27815 886 aa9.28□□□□□ -0.92
SMG6-211ENST00000572369 SHMT1P34896 483 aa9.28□□□□□ -0.92
SMG6-211ENST00000572369 CDK8P49336 464 aa9.28□□□□□ -0.92
SMG6-211ENST00000572369 NMIQ13287 307 aaPredicted RBP9.28□□□□□ -0.92
SMG6-211ENST00000572369 CRHR2Q13324 411 aa9.28□□□□□ -0.92
SMG6-211ENST00000572369 MCMDC2Q4G0Z9 681 aa9.28□□□□□ -0.92
SMG6-211ENST00000572369 TTC22Q5TAA0 569 aa9.28□□□□□ -0.92
SMG6-211ENST00000572369 ZNF697Q5TEC3 545 aa9.28□□□□□ -0.92
SMG6-211ENST00000572369 C12orf60Q5U649 245 aa9.28□□□□□ -0.92
SMG6-211ENST00000572369 TATDN1Q6P1N9 297 aa9.28□□□□□ -0.92
SMG6-211ENST00000572369 GIMAP6Q6P9H5 292 aa9.28□□□□□ -0.92
SMG6-211ENST00000572369 PRRT2Q7Z6L0 340 aaPredicted RBP9.28□□□□□ -0.92
SMG6-211ENST00000572369 ANKRD23Q86SG2 305 aa9.28□□□□□ -0.92
SMG6-211ENST00000572369 IFNL3Q8IZI9 196 aa9.28□□□□□ -0.92
SMG6-211ENST00000572369 FAM227BQ96M60 508 aa9.28□□□□□ -0.92
SMG6-211ENST00000572369 MKNK2Q9HBH9 465 aa9.28□□□□□ -0.92
SMG6-211ENST00000572369 ZNF287Q9HBT7 754 aa9.28□□□□□ -0.92
SMG6-211ENST00000572369 A0A0D9SFI3 127 aa9.27□□□□□ -0.93
SMG6-211ENST00000572369 MRE11P49959 708 aa9.27□□□□□ -0.93
SMG6-211ENST00000572369 HMGCS2P54868 508 aa9.27□□□□□ -0.93
SMG6-211ENST00000572369 EVX2Q03828 476 aa9.27□□□□□ -0.93
SMG6-211ENST00000572369 PABPC4Q13310 644 aaKnown RBP eCLIP9.27□□□□□ -0.93
SMG6-211ENST00000572369 MTMR2Q13614 643 aa9.27□□□□□ -0.93
SMG6-211ENST00000572369 KIF22Q14807 665 aa9.27□□□□□ -0.93
SMG6-211ENST00000572369 ZYXQ15942 572 aaKnown RBP9.27□□□□□ -0.93
SMG6-211ENST00000572369 SHROOM1Q2M3G4 852 aaPredicted RBP9.27□□□□□ -0.93
SMG6-211ENST00000572369 SBK1Q52WX2 424 aa9.27□□□□□ -0.93
SMG6-211ENST00000572369 CWC27Q6UX04 472 aaKnown RBP9.27□□□□□ -0.93
SMG6-211ENST00000572369 TICAM2Q86XR7 235 aa9.27□□□□□ -0.93
SMG6-211ENST00000572369 SLC44A5Q8NCS7 719 aa9.27□□□□□ -0.93
SMG6-211ENST00000572369 PARK7Q99497 189 aaKnown RBP9.27□□□□□ -0.93
SMG6-211ENST00000572369 ZCCHC17Q9NP64 241 aaKnown RBP9.27□□□□□ -0.93
SMG6-211ENST00000572369 TAOK2Q9UL54 1235 aa9.27□□□□□ -0.93
SMG6-211ENST00000572369 MUC6Q6W4X9 2439 aa9.27□□□□□ -0.93
SMG6-211ENST00000572369 LOC285556D6RIA3 1793 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms